External quality assessment for enterovirus 71 and coxsackievirus A16 detection by reverse transcription-PCR using armored RNA as a virus surrogate

Journal of Clinical Microbiology

Volumn 49, Issue 10, 2011, Pages 3591-3595

  Song, Liqiong ^a,b   Sun, Shipeng ^a,b   Li, Bo ^c   Pan, Yang ^a,b   Li, Wenli ^a,b   Zhang, Kuo ^b   Li, Jinming ^b  

^a GRADUATE SCHOOL OF PEKING UNION MEDICAL COLLEGE   (China)

^b BEIJING HOSPITAL   (China)

^c UNIVERSITY OF COLORADO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; COXSACKIE VIRUS; COXSACKIE VIRUS A16; ENTEROVIRUS 71; EXTERNAL QUALITY ASSESSMENT; FALSE NEGATIVE RESULT; GENE SEQUENCE; HAND FOOT AND MOUTH DISEASE; HUMAN; LABORATORY TEST; MAJOR CLINICAL STUDY; MOLECULAR DIAGNOSIS; NONHUMAN; PERFORMANCE; PRIORITY JOURNAL; QUALITY CONTROL; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; VIRUS DETECTION; VIRUS LIKE AGENT;

ENTEROVIRUS; ENTEROVIRUS INFECTIONS; HUMANS; MOLECULAR DIAGNOSTIC TECHNIQUES; REFERENCE STANDARDS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA; VIROLOGY;

COXSACKIEVIRUS; ENTEROVIRUS; FOOT-AND-MOUTH DISEASE VIRUS; HUMAN ENTEROVIRUS 71;

EID: 80053556235     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00686-11     Document Type: Article

References (31)

1. Aarthi, D., K. Ananda Rao, R. Robinson, and V. A. Srinivasan. 2004. Validation of binary ethyleneimine (BEI) used as an inactivant for foot and mouth disease tissue culture vaccine. Biologicals 32:153-156. (Pubitemid 39469317)
2. AbuBakar, S., et al. 1999. Identification of enterovirus 71 isolates from an outbreak of hand, foot and mouth disease (HFMD) with fatal cases of encephalomyelitis in Malaysia. Virus Res. 61:1-9.
3. Beld, M., et al. 2004. Highly sensitive assay for detection of enterovirus in clinical specimens by reverse transcription-PCR with an armored RNA internal control. J. Clin. Microbiol. 42:3059-3064. (Pubitemid 38938058)
4. Bressler, A. M., and F. S. Nolte. 2004. Preclinical evaluation of two real-time, reverse transcription-PCR assays for detection of the severe acute respiratory syndrome coronavirus. J. Clin. Microbiol. 42:987-991. (Pubitemid 38332814)
5. Chan, K. P., et al. 2003. Epidemic hand, foot and mouth disease caused by human enterovirus 71, Singapore. Emerg. Infect. Dis. 9:78-85. (Pubitemid 36110205)
6. Chang, L. Y., et al. 2004. Transmission and clinical features of enterovirus 71 infections in household contacts in Taiwan. JAMA 291:222-227.
7. Chang, L. Y., et al. 1999. Comparison of enterovirus 71 and coxsackie-virus A16 clinical illnesses during the Taiwan enterovirus epidemic, 1998. Pediatr. Infect. Dis. J. 18:1092-1096.
8. Chen, T. C., et al. 2006. Combining multiplex reverse transcription-PCR and a diagnostic microarray to detect and differentiate enterovirus 71 and coxsackievirus A16. J. Clin. Microbiol. 44:2212-2219.
9. De Pagter, P. J., R. Schuurman, N. M. De Vos, W. Mackay, and A. M. Van Loon. 2010. Multicenter external quality assessment of molecular methods for detection of human herpesvirus 6. J. Clin. Microbiol. 48:2536-2540.
10. Domingo, C., et al. 2010. 2nd international external quality control assessment for the molecular diagnosis of dengue infections. PLoS Negl. Trop. Dis. 4:e833.
11. Foo, D. G., et al. 2008. Identification of immunodominant VP1 linear epitope of enterovirus 71 (EV71) using synthetic peptides for detecting human anti-EV71 IgG antibodies in Western blots. Clin. Microbiol. Infect. 14:286-288. (Pubitemid 351201022)
12. Hietala, S. K., and B. M. Crossley. 2006. Armored RNA as virus surrogate in a real-time reverse transcriptase PCR assay proficiency panel. J. Clin. Microbiol. 44:67-70. (Pubitemid 43100581)
13. Huang, Q. Y., Y. J. Cheng, Q. W. Guo, and Q. G. Li. 2006. Preparation of a chimeric armored RNA as a versatile calibrator for multiple virus assays. Clin. Chem. 52:1446-1448.
14. Jiang, T., et al. 2011. Development and evaluation of a reverse transcription-loop-mediated isothermal amplification assay for rapid detection of enterovirus 71. J. Clin. Microbiol. 49:870-874.
15. Kessler, H. H., et al. 1997. Rapid diagnosis of enterovirus infection by a new one-step reverse transcription-PCR assay. J. Clin. Microbiol. 35:976-977. (Pubitemid 27146549)
16. Li, L., et al. 2005. Genetic characteristics of human enterovirus 71 and coxsackievirus A16 circulating from 1999 to 2004 in Shenzhen, People's Republic of China. J. Clin. Microbiol. 43:3835-3839. (Pubitemid 41129670)
17. Lipson, S. M., R. Walderman, P. Costello, and K. Szabo. 1988. Sensitivity of rhabdomyosarcoma and guinea pig embryo cell cultures to field isolates of difficult-to-cultivate group A coxsackieviruses. J. Clin. Microbiol. 26:1298-1303.
18. Pasloske, B. L., C. R. Walkerpeach, R. D. Obermoeller, M. Winkler, and D. B. DuBois. 1998. Armored RNA technology for production of ribonuclease- resistant viral RNA controls and standards. J. Clin. Microbiol. 36: 3590-3594. (Pubitemid 28533234)
19. Pisani, G., et al. 2008. External quality assessment for the detection of HCV RNA, HIV RNA and HBV DNA in plasma by nucleic acid amplification technology: a novel approach. Vox Sang. 95:8-12. (Pubitemid 351799412)
20. Qiu, J. 2008. Enterovirus 71 infection: a new threat to global public health? Lancet Neurol. 7:868-869.
21. Ryu, W. S., et al. 2010. Clinical and etiological characteristics of enterovirus 71-related diseases during a recent 2-year period in Korea. J. Clin. Microbiol. 48:2490-2494.
22. Saldanha, J., N. Lelie, A. Heath, and the WHO Collaborative Study Group. 1999. Establishment of the first international standard for nucleic acid amplification technology (NAT) assays for HCV RNA. Vox Sang. 76:149-158. (Pubitemid 29204528)
23. Simes, R. 1986. An improved Bonferroni procedure for multiple tests of significance. Biometrika 73:751-754.
24. Thao, N. T., et al. 2010. Development of a multiplex polymerase chain reaction assay for simultaneous identification of human enterovirus 71 and coxsackievirus A16. J. Virol. Methods 170:134-139.
25. Wang, J. R., et al. 2002. Change of major genotype of enterovirus 71 in outbreaks of hand-foot-and-mouth disease in Taiwan between 1998 and 2000. J. Clin. Microbiol. 40:10-15.
26. Wang, S. Y., T. L. Lin, H. Y. Chen, and T. S. Lin. 2004. Early and rapid detection of enterovirus 71 infection by an IgM-capture ELISA. J. Virol. Methods 119:37-43.
27. Wei, Y. X., et al. 2008. RNase-resistant virus-like particles containing long chimeric RNA sequences produced by two-plasmid coexpression system. J. Clin. Microbiol. 46:1734-1740.
28. Xu, F., et al. 2010. Performance of detecting IgM antibodies against enterovirus 71 for early diagnosis. PLoS One 5:e11388.
29. Yang, F., et al. 2009. Enterovirus 71 outbreak in the People's Republic of China in 2008. J. Clin. Microbiol. 47:2351-2352.
30. Zhan, S. E., et al. 2009. Armored long RNA controls or standards for branched DNA assay for detection of human immunodeficiency virus type 1. J. Clin. Microbiol. 47:2571-2576.
31. Zhang, D., J. Lu, and J. Lu. 2010. Enterovirus 71 vaccine: close but still far. Int. J. Infect. Dis. 14:e739-e743.