메뉴 건너뛰기




Volumn 11, Issue , 2011, Pages

Clonal diversity of the glutamate dehydrogenase gene in Giardia duodenalis from Thai Isolates: Evidence of genetic exchange or Mixed Infections?

Author keywords

genetic diversity; genetic exchange; Giardia duodenalis; glutamate dehydrogenase

Indexed keywords

GLUTAMATE DEHYDROGENASE;

EID: 80053175264     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-11-206     Document Type: Article
Times cited : (21)

References (42)
  • 1
    • 0035991398 scopus 로고    scopus 로고
    • Current trends in research into the waterborne parasite Giardia
    • Current trends in research into the waterborne parasite Giardia. Lane S, Lloyd D, Crit Rev Microbiol 2002 28 2 123 147 10.1080/1040-840291046713 2384520 (Pubitemid 34779348)
    • (2002) Critical Reviews in Microbiology , vol.28 , Issue.2 , pp. 123-147
    • Lane, S.1    Lloyd, D.2
  • 2
    • 0034192007 scopus 로고    scopus 로고
    • Nomenclature and genetic groupings of giardia infecting mammals
    • DOI 10.1016/S0169-4758(99)01624-5, PII S0169475899016245
    • Nomenclature and genetic groupings of Giardia infecting mammals. Thompson RC, Hopkins RM, Homan WL, Parasitol Today 2000 16 5 210 213 10.1016/S0169-4758(99)01624-5 10782081 (Pubitemid 30216567)
    • (2000) Parasitology Today , vol.16 , Issue.5 , pp. 210-213
    • Thompson, R.C.A.1    Hopkins, R.M.2    Homan, W.L.3
  • 3
    • 77249123257 scopus 로고    scopus 로고
    • World Health Organisation. The world health report
    • World Health Organisation. The world health report, World Health Organisation, Geneva 1996
    • (1996) World Health Organisation, Geneva
  • 5
    • 0031713806 scopus 로고    scopus 로고
    • Characterization of Giardia duodenalis by polymerase-chain-reaction fingerprinting
    • DOI 10.1007/s004360050474
    • Characterization of Giardia duodenalis by polymerase-chain-reaction fingerprinting. Homan WL, Gilsing M, Bentala H, Limper L, van Knapen F, Parasitol Res 1998 84 9 707 714 10.1007/s004360050474 9766898 (Pubitemid 28408670)
    • (1998) Parasitology Research , vol.84 , Issue.9 , pp. 707-714
    • Homan, W.L.1    Gilsing, M.2    Bentala, H.3    Limper, L.4    Van Knapen, F.5
  • 7
    • 0030951382 scopus 로고    scopus 로고
    • Ribosomal RNA sequencing reveals differences between the genotypes of Giardia isolates recovered from humans and dogs living in the same locality
    • DOI 10.2307/3284315
    • Ribosomal RNA sequencing reveals differences between the genotypes of Giardia isolates recovered from humans and dogs living in the same locality. Hopkins RM, Meloni BP, Groth DM, Wetherall JD, Reynoldson JA, Thompson RC, J Parasitol 1997 83 1 44 51 10.2307/3284315 9057695 (Pubitemid 27172243)
    • (1997) Journal of Parasitology , vol.83 , Issue.1 , pp. 44-51
    • Hopkins, R.M.1    Meloni, B.P.2    Groth, D.M.3    Wetherall, J.D.4    Reynoldson, J.A.5    Thompson, R.C.A.6
  • 10
    • 77953917550 scopus 로고    scopus 로고
    • The identification of a new Giardia duodenalis assemblage in marine vertebrates and a preliminary analysis of G. duodenalis population biology in marine systems
    • 10.1016/j.ijpara.2010.02.015 20361967
    • The identification of a new Giardia duodenalis assemblage in marine vertebrates and a preliminary analysis of G. duodenalis population biology in marine systems. Lasek-Nesselquist E, Welch DM, Sogin ML, Int J Parasitol 2010 40 9 1063 1064 10.1016/j.ijpara.2010.02.015 20361967
    • (2010) Int J Parasitol , vol.40 , Issue.9 , pp. 1063-1064
    • Lasek-Nesselquist, E.1    Welch, D.M.2    Sogin, M.L.3
  • 11
    • 0025232023 scopus 로고
    • In situ analyses reveal that the two nuclei of Giardia lamblia are equivalent
    • 2384520
    • In situ analyses reveal that the two nuclei of Giardia lamblia are equivalent. Kabnick KS, Peattie DA, J Cell Sci 1990 95 Pt 3 353 360 2384520
    • (1990) J Cell Sci , vol.95 , Issue.PART 3 , pp. 353-360
    • Kabnick, K.S.1    Peattie, D.A.2
  • 12
    • 0036545678 scopus 로고    scopus 로고
    • The two nuclei of Giardia each have complete copies of the genome and are partitioned equationally at cytokinesis
    • DOI 10.1128/EC.1.2.191-199.2002
    • The two nuclei of Giardia each have complete copies of the genome and are partitioned equationally at cytokinesis. Yu LZ, Birky CW, Adam RD, Eukaryot Cell 2002 1 2 191 199 10.1128/EC.1.2.191-199.2002 12455954 (Pubitemid 36562396)
    • (2002) Eukaryotic Cell , vol.1 , Issue.2 , pp. 191-199
    • Yu, L.Z.1    Birky Jr., C.W.2    Adam, R.D.3
  • 13
    • 0035179546 scopus 로고    scopus 로고
    • How giardia swim and divide
    • DOI 10.1128/IAI.69.12.7866-7872.2001
    • How Giardia swim and divide. Ghosh S, Frisardi M, Rogers R, Samuelson J, Infect Immun 2001 69 12 7866 7872 10.1128/IAI.69.12.7866-7872.2001 11705969 (Pubitemid 33086618)
    • (2001) Infection and Immunity , vol.69 , Issue.12 , pp. 7866-7872
    • Ghosh, S.1    Frisardi, M.2    Rogers, R.3    Samuelson, J.4
  • 14
    • 0035139680 scopus 로고    scopus 로고
    • Genome ploidy in different stages of the Giardia lamblia life cycle
    • DOI 10.1046/j.1462-5822.2001.00094.x
    • Genome ploidy in different stages of the Giardia lamblia life cycle. Bernander R, Palm JE, Svard SG, Cell Microbiol 2001 3 1 55 62 10.1046/j.1462-5822.2001.00094.x 11207620 (Pubitemid 32107426)
    • (2001) Cellular Microbiology , vol.3 , Issue.1 , pp. 55-62
    • Bernander, R.1    Palm, J.E.D.2    Svard, S.G.3
  • 15
    • 33845873594 scopus 로고    scopus 로고
    • Three-dimensional analysis of mitosis and cytokinesis in the binucleate parasite Giardia intestinalis
    • DOI 10.1242/jcs.03276
    • Three-dimensional analysis of mitosis and cytokinesis in the binucleate parasite Giardia intestinalis. Sagolla MS, Dawson SC, Mancuso JJ, Cande WZ, J Cell Sci 2006 119 Pt 23 4889 4900 17105767 (Pubitemid 46017802)
    • (2006) Journal of Cell Science , vol.119 , Issue.23 , pp. 4889-4900
    • Sagolla, M.S.1    Dawson, S.C.2    Mancuso, J.J.3    Cande, W.Z.4
  • 18
    • 34547916091 scopus 로고    scopus 로고
    • Unusually low levels of genetic variation among Giardia lamblia isolates
    • DOI 10.1128/EC.00138-07
    • Unusually low levels of genetic variation among Giardia lamblia isolates. Teodorovic S, Braverman JM, Elmendorf HG, Eukaryot Cell 2007 6 8 1421 1430 10.1128/EC.00138-07 17557879 (Pubitemid 47257711)
    • (2007) Eukaryotic Cell , vol.6 , Issue.8 , pp. 1421-1430
    • Teodorovic, S.1    Braverman, J.M.2    Elmendorf, H.G.3
  • 19
    • 36048972596 scopus 로고    scopus 로고
    • Population genetics provides evidence for recombination in giardia
    • DOI 10.1016/j.cub.2007.10.020, PII S0960982207020817
    • Population genetics provides evidence for recombination in Giardia. Cooper MA, Adam RD, Worobey M, Sterling CR, Curr Biol 2007 17 22 1984 1988 10.1016/j.cub.2007.10.020 17980591 (Pubitemid 350088486)
    • (2007) Current Biology , vol.17 , Issue.22 , pp. 1984-1988
    • Cooper, M.A.1    Adam, R.D.2    Worobey, M.3    Sterling, C.R.4
  • 20
    • 0018837855 scopus 로고
    • An investigation of variables in a fecal flotation technique
    • 7190861
    • An investigation of variables in a fecal flotation technique. O'Grady MR, Slocombe JO, Can J Comp Med 1980 44 2 148 157 7190861
    • (1980) Can J Comp Med , vol.44 , Issue.2 , pp. 148-157
    • O'Grady, M.R.1    Slocombe, J.O.2
  • 21
    • 77956028306 scopus 로고    scopus 로고
    • Improved sensitivity of PCR amplification of glutamate dehydrogenase gene for detection and genotyping of Giardia duodenalis in stool specimen
    • 20578509
    • Improved sensitivity of PCR amplification of glutamate dehydrogenase gene for detection and genotyping of Giardia duodenalis in stool specimen. Boontanom P, Siripattanapipong S, Mungthin M, Tan-ariya P, Leelayoova S, Southeast Asian J Trop Med Public Health 2010 41 2 280 284 20578509
    • (2010) Southeast Asian J Trop Med Public Health , vol.41 , Issue.2 , pp. 280-284
    • Boontanom, P.1    Siripattanapipong, S.2    Mungthin, M.3    Tan-Ariya, P.4    Leelayoova, S.5
  • 23
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • MRBAYES: Bayesian inference of phylogenetic trees. Huelsenbeck JP, Ronquist F, Bioinformatics 2001 17 8 754 755 10.1093/bioinformatics/17.8.754 11524383 (Pubitemid 32851390)
    • (2001) Bioinformatics , vol.17 , Issue.8 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 24
    • 45949109669 scopus 로고    scopus 로고
    • MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
    • DOI 10.1093/bib/bbn017, Special Issue: Critical Technologies for Bioinformatics
    • MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Kumar S, Nei M, Dudley J, Tamura K, Brief Bioinform 2008 9 4 299 306 10.1093/bib/bbn017 18417537 (Pubitemid 351890826)
    • (2008) Briefings in Bioinformatics , vol.9 , Issue.4 , pp. 299-306
    • Kumar, S.1    Nei, M.2    Dudley, J.3    Tamura, K.4
  • 25
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
    • 10.1093/bioinformatics/btp187 19346325
    • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Librado P, Rozas J, Bioinformatics 2009 25 11 1451 1452 10.1093/bioinformatics/ btp187 19346325
    • (2009) Bioinformatics , vol.25 , Issue.11 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 26
    • 0043122919 scopus 로고    scopus 로고
    • SIFT: Predicting amino acid changes that affect protein function
    • DOI 10.1093/nar/gkg509
    • SIFT: Predicting amino acid changes that affect protein function. Ng PC, Henikoff S, Nucleic Acids Res 2003 31 13 3812 3814 10.1093/nar/gkg509 12824425 (Pubitemid 37442253)
    • (2003) Nucleic Acids Research , vol.31 , Issue.13 , pp. 3812-3814
    • Ng, P.C.1    Henikoff, S.2
  • 27
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Tajima F, Genetics 1989 123 3 585 595 2513255 (Pubitemid 19274682)
    • (1989) Genetics , vol.123 , Issue.3 , pp. 585-595
    • Tajima, F.1
  • 29
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • DOI 10.1093/molbev/msj030
    • Application of phylogenetic networks in evolutionary studies. Huson DH, Bryant D, Mol Biol Evol 2006 23 2 254 267 16221896 (Pubitemid 43100040)
    • (2006) Molecular Biology and Evolution , vol.23 , Issue.2 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 30
    • 1542347067 scopus 로고    scopus 로고
    • Neighbor-net: An agglomerative method for the construction of phylogenetic networks
    • DOI 10.1093/molbev/msh018
    • Neighbor-net: an agglomerative method for the construction of phylogenetic networks. Bryant D, Moulton V, Mol Biol Evol 2004 21 2 255 265 14660700 (Pubitemid 38314614)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.2 , pp. 255-265
    • Bryant, D.1    Moulton, V.2
  • 31
    • 33646167864 scopus 로고    scopus 로고
    • A simple and robust statistical test for detecting the presence of recombination
    • 16489234
    • A simple and robust statistical test for detecting the presence of recombination. Bruen TC, Philippe H, Bryant D, Genetics 2006 172 4 2665 2681 16489234
    • (2006) Genetics , vol.172 , Issue.4 , pp. 2665-2681
    • Bruen, T.C.1    Philippe, H.2    Bryant, D.3
  • 32
    • 0020744702 scopus 로고
    • Properties of a neutral allele model with intragenic recombination
    • 10.1016/0040-5809(83)90013-8 6612631
    • Properties of a neutral allele model with intragenic recombination. Hudson RR, Theor Popul Biol 1983 23 2 183 201 10.1016/0040-5809(83)90013-8 6612631
    • (1983) Theor Popul Biol , vol.23 , Issue.2 , pp. 183-201
    • Hudson, R.R.1
  • 33
    • 50049135646 scopus 로고    scopus 로고
    • Molecular epidemiology of giardiasis
    • 10.1016/j.molbiopara.2008.04.006 18501440
    • Molecular epidemiology of giardiasis. Caccio SM, Ryan U, Mol Biochem Parasitol 2008 160 2 75 80 10.1016/j.molbiopara.2008.04.006 18501440
    • (2008) Mol Biochem Parasitol , vol.160 , Issue.2 , pp. 75-80
    • Caccio, S.M.1    Ryan, U.2
  • 34
    • 74549188438 scopus 로고    scopus 로고
    • Identification of zoonotic genotypes of Giardia duodenalis
    • 10.1371/journal.pntd.0000558 19956662
    • Identification of zoonotic genotypes of Giardia duodenalis. Sprong H, Caccio SM, van der Giessen JW, PLoS Negl Trop Dis 2009 3 12 558 10.1371/journal.pntd.0000558 19956662
    • (2009) PLoS Negl Trop Dis , vol.3 , Issue.12 , pp. 5558
    • Sprong, H.1    Caccio, S.M.2    Van Der Giessen, J.W.3
  • 35
    • 70350621214 scopus 로고    scopus 로고
    • Clonal diversity in Giardia duodenalis isolates from Thailand: Evidences for intragenic recombination and purifying selection at the beta giardin locus
    • 10.1016/j.gene.2009.09.010 19796671
    • Clonal diversity in Giardia duodenalis isolates from Thailand: evidences for intragenic recombination and purifying selection at the beta giardin locus. Kosuwin R, Putaporntip C, Pattanawong U, Jongwutiwes S, Gene 2010 449 (1 2):1-8 10.1016/j.gene.2009.09.010 19796671
    • (2010) Gene , vol.449 , Issue.12 , pp. 1-8
    • Kosuwin, R.1    Putaporntip, C.2    Pattanawong, U.3    Jongwutiwes, S.4
  • 36
    • 0024799121 scopus 로고
    • A glutamate dehydrogenase gene sequence
    • A glutamate dehydrogenase gene sequence. Cock JM, Schmidt RR, Nucleic Acids Res 1989 17 24 10500 10.1093/nar/17.24.10500 2690019 (Pubitemid 20012210)
    • (1989) Nucleic Acids Research , vol.17 , Issue.24 , pp. 10500
    • Cock, J.M.1    Schmidt, R.R.2
  • 37
    • 70350036191 scopus 로고    scopus 로고
    • Multilocus genotyping of Cryptosporidium and Giardia in non-outbreak related cases of diarrhoea in human patients in Belgium
    • 10.1017/S0031182009990436 19631012
    • Multilocus genotyping of Cryptosporidium and Giardia in non-outbreak related cases of diarrhoea in human patients in Belgium. Geurden T, Levecke B, Caccio SM, Visser A, De Groote G, Casaert S, Vercruysse J, Claerebout E, Parasitology 2009 136 10 1161 1168 10.1017/S0031182009990436 19631012
    • (2009) Parasitology , vol.136 , Issue.10 , pp. 1161-1168
    • Geurden, T.1    Levecke, B.2    Caccio, S.M.3    Visser, A.4    De Groote, G.5    Casaert, S.6    Vercruysse, J.7    Claerebout, E.8
  • 38
    • 12544259704 scopus 로고    scopus 로고
    • A phylogenomic inventory of meiotic genes; Evidence for sex in Giardia and an early eukaryotic origin of meiosis
    • 15668177
    • A phylogenomic inventory of meiotic genes; evidence for sex in Giardia and an early eukaryotic origin of meiosis. Ramesh MA, Malik SB, Logsdon JM Jr, Curr Biol 2005 15 2 185 191 15668177
    • (2005) Curr Biol , vol.15 , Issue.2 , pp. 185-191
    • Ramesh, M.A.1    Malik, S.B.2    Logsdon Jr., J.M.3
  • 39
    • 70350512840 scopus 로고    scopus 로고
    • Genetic exchange within and between assemblages of Giardia duodenalis
    • 10.1111/j.1550-7408.2009.00443.x 19883439
    • Genetic exchange within and between assemblages of Giardia duodenalis. Lasek-Nesselquist E, Welch DM, Thompson RC, Steuart RF, Sogin ML, J Eukaryot Microbiol 2009 56 6 504 518 10.1111/j.1550-7408.2009.00443.x 19883439
    • (2009) J Eukaryot Microbiol , vol.56 , Issue.6 , pp. 504-518
    • Lasek-Nesselquist, E.1    Welch, D.M.2    Thompson, R.C.3    Steuart, R.F.4    Sogin, M.L.5
  • 40
    • 0036097812 scopus 로고    scopus 로고
    • Evaluation of methods for detecting recombination from DNA sequences: Empirical data
    • Evaluation of methods for detecting recombination from DNA sequences: empirical data. Posada D, Mol Biol Evol 2002 19 5 708 717 11961104 (Pubitemid 34521302)
    • (2002) Molecular Biology and Evolution , vol.19 , Issue.5 , pp. 708-717
    • Posada, D.1
  • 42
    • 45849154165 scopus 로고    scopus 로고
    • Jmodeltest: Phylogenetic model averaging
    • DOI 10.1093/molbev/msn083
    • Posada D. jModelTest: Phylogenetic model averaging Molecular Biology and Evolution 2008 25 7 1253-1256 DOI 10.1093/molbev/msn083 (Pubitemid 351882013)
    • (2008) Molecular Biology and Evolution , vol.25 , Issue.7 , pp. 1253-1256
    • Posada, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.