Biological pretreatment with a cellobiose dehydrogenase-deficient strain of Trametes versicolor enhances the biofuel potential of canola straw

Bioresource Technology

Volumn 102, Issue 21, 2011, Pages 10020-10027

  Canam, Thomas ^a,d   Town, Jennifer R ^a   Tsang, Adrian ^b   McAllister, Tim A ^c   Dumonceaux, Tim J ^a  

^a SASKATOON RESEARCH CENTRE   (Canada)

^b Gina Cody School of Engineering and Computer Science   (Canada)

^c LETHBRIDGE RESEARCH CENTRE   (Canada)

^d EASTERN ILLINOIS UNIVERSITY   (United States)

Author keywords

Biological pretreatment; Canola straw; Cellobiose dehydrogenase; Lignocellulose; Trametes versicolor

Indexed keywords

BIOFUEL PRODUCTION; BIOLOGICAL PRE-TREATMENT; CELLOBIOSE; CELLOBIOSE DEHYDROGENASE; EXTRACTABILITY; FUNGAL TREATMENT; GLUCOSE CONTENT; GLUCOSE YIELDS; LIGNOCELLULOSE; LIGNOCELLULOSIC MATERIAL; T. VERSICOLOR; TRAMETES VERSICOLOR; WILD-TYPE STRAIN;

BIOFUELS; CELLULOSE; GLUCOSE; METABOLISM; SACCHARIFICATION;

LIGNIN;

BIOFUEL; CELLOBIOSE QUINONE OXIDOREDUCTASE; GLUCOSE; LIGNIN; XYLOSE;

BIOFUEL; BIOLOGICAL ANALYSIS; BIOMASS; CANOLA; CATABOLISM; CELLULOSE; ENZYME ACTIVITY; FUNGUS; GLUCOSE; OIL PRODUCTION; STRAW;

ARTICLE; BIOENERGY; BIOFUEL PRODUCTION; CANOLA STRAW; CATABOLISM; CONTROLLED STUDY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SACCHARIFICATION; SOLID STATE FERMENTATION; STRAW; TRAMETES VERSICOLOR;

ACIDS; ALDEHYDES; BIOFUELS; BIOTECHNOLOGY; BRASSICA NAPUS; CARBOHYDRATE DEHYDROGENASES; CARBOHYDRATE METABOLISM; CELL WALL; ERGOSTEROL; FERMENTATION; FURALDEHYDE; GENE EXPRESSION REGULATION, FUNGAL; GLUCOSE; HYDROLYSIS; LIGNIN; MUTATION; SOLUBILITY; TIME FACTORS; TRAMETES; WASTE PRODUCTS;

DEHYDROGENATION; GLUCOSE; LIGNINS; LIGNOCELLULOSE; METABOLISM; PRETREATMENT; PRODUCTION; SACCHARIFICATION; STRAW;

BRASSICA NAPUS VAR. NAPUS; TRAMETES VERSICOLOR;

EID: 80053096980     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2011.08.045     Document Type: Article

References (35)

1. Addleman K., Archibald F. Kraft pulp bleaching and delignification by dikaryons and monokaryons of Trametes versicolor. Appl. Environ. Microbiol. 1993, 59:266-273.
2. Anderson W.F., Akin D.E. Structural and chemical properties of grass lignocelluloses related to conversion for biofuels. J. Ind. Microbiol. Biotechnol. 2008, 35:355-366.
3. Baldrian P., Valaskova V. Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol. Rev. 2008, 32:501-521.
4. Chandra R.P., Bura R., Mabee W.E., Berlin A., Pan X., Saddler J.N. Substrate pretreatment: the key to effective enzymatic hydrolysis of lignocellulosics?. Adv. Biochem. Eng. Biotechnol. 2007, 108:67-93.
5. Dumonceaux T., Bartholomew K., Valeanu L., Charles T., Archibald F. Cellobiose dehydrogenase is essential for wood invasion and nonessential for kraft pulp delignification by Trametes versicolor. Enzyme Microb. Technol. 2001, 29:478-489.
6. George N., Yang Y., Wang Z., Sharma-Shivappa R., Tungate K. Suitability of canola residue for cellulosic ethanol production. Energy Fuels 2010, 24:4454-4458.
7. Hammel K.E., Kapich A.N., Jensen K.A., Ryan Z.C. Reactive oxygen species as agents of wood decay by fungi. Enzyme Microb. Technol. 2002, 30:445-453.
8. Harreither W., Sygmund C., Dunhofen E., Vicuna R., Haltrich D., Ludwig R. Cellobiose dehydrogenase from the ligninolytic basidiomycete Ceriporiopsis subvermispora. Appl. Environ. Microbiol. 2009, 75:2750-2757.
9. Hemmingsen S.M., Woolford C., van der Vies S.M., Tilly K., Dennis D.T., Georgopoulos C.P., Hendrix R.W., Ellis R.J. Homologous plant and bacterial proteins chaperone oligomeric protein assembly. Nature 1988, 333:330-334.
10. Hendriks A.T.W.M., Zeeman G. Pretreatments to enhance the digestibility of lignocellulosic biomass. Bioresour. Technol. 2009, 100:10-18.
11. Hess M., Sczyrba A., Egan R., Kim T.W., Chokhawala H., Schroth G., Luo S., Clark D.S., Chen F., Zhang T., Mackie R.I., Pennacchio L.A., Tringe S.G., Visel A., Woyke T., Wang Z., Rubin E.M. Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science 2011, 331:463-467.
12. Hobbie J.E., Hobbie E.A., Drossman H., Conte M., Weber J.C., Shamhart J., Weinrobe M. Mycorrhizal fungi supply nitrogen to host plants in Arctic tundra and boreal forests: 15N is the key signal. Can. J. Microbiol. 2009, 55:84-94.
13. Larsson S., Palmqvist E., Hahn-Hägerdal B., Tengborg C., Stenberg K., Zacchi G., Nilvebrant N.-O. The generation of fermentation inhibitors during dilute acid hydrolysis of softwood. Enzyme Microb. Technol. 1999, 24:151-159.
14. Lerma-García M.J., Simó-Alfonso E.F., Méndez A., Lliberia J.L., Herrero-Martínez J.M. Fast separation and determination of sterols in vegetable oils by ultraperformance liquid chromatography with atmospheric pressure chemical ionization mass spectrometry detection. J. Agric. Food Chem. 2010, 58:2771-2776.
15. Mabee W.E., Saddler J.N. Bioethanol from lignocellulosics: status and perspectives in Canada. Bioresour. Technol. 2010, 101:4806-4813.
16. MacDonald J., Doering M., Canam T., Gong Y., Guttman D.S., Campbell M.M., Master E.R. Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. Appl. Environ. Microbiol. 2011, AEM.02490-10.
17. Mansfield S.D., De Jong E., Saddler J.N. Cellobiose dehydrogenase, an active agent in cellulose depolymerization. Appl. Environ. Microbiol. 1997, 63:3804-3809.
18. Martinez D., Challacombe J., Morgenstern I., Hibbett D., Schmoll M., Kubicek C.P., Ferreira P., Ruiz-Duenas F.J., Martinez A.T., Kersten P., Hammel K.E., Vanden Wymelenberg A., Gaskell J., Lindquist E., Sabat G., Splinter BonDurant S., Larrondo L.F., Canessa P., Vicuna R., Yadav J., Doddapaneni H., Subramanian V., Pisabarro A.G., Lavan J.L., Oguiza J.A., Master E., Henrissat B., Coutinho P.M., Harris P., Magnuson J.K., Baker S.E., Bruno K., Kenealy W., Hoegger P.J., Kaes U., Ramaiya P., Lucas S., Salamov A., Shapiro H., Tu H., Chee C.L., Misra M., Xie G., Teter S., Yaver D., James T., Mokrejs M., Pospisek M., Grigoriev I.V., Brettin T., Rokhsar D., Berka R., Cullen D. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proc. Natl. Acad. Sci. USA 2009, 106:1954-1959.
19. Mason M.G., Nicholls P., Wilson M.T. Rotting by radicals - the role of cellobiose oxidoreductase?. Biochem. Soc. Trans. 2003, 31:1335-1336.
20. Matityahu A., Hadar Y., Dosoretz C.G., Belinky P.A. Gene silencing by RNA interference in the white rot fungus Phanerochaete chrysosporium. Appl. Environ. Microbiol. 2008, 74:5359-5365.
21. Moukha S.M., Dumonceaux T.J., Record E., Archibald F.S. Cloning and analysis of Pycnoporus cinnabarinus cellobiose dehydrogenase. Gene 1999, 234:23-33.
22. Pan X., Xie D., Kang K.Y., Yoon S.L., Saddler J.N. Effect of organosolv ethanol pretreatment variables on physical characteristics of hybrid poplar substrates. Appl. Biochem. Biotechnol. 2007, 137-140:367-377.
23. Patel S.J., Onkarappa R., Shobha K.S. Fungal pretreatment studies on rice husk and bagasse for ethanol production. Elect. J. Environ. Agric. Food Chem. 2007, 6:1921-1926.
24. Petersson A., Thomsen M.H., Hauggaard-Nielsen H., Thomsen A.B. Potential bioethanol and biogas production using lignocellulosic biomass from winter rye, oilseed rape and faba bean. Biomass Bioenergy 2007, 31:812-819.
25. Qi, M., Wang, P., O'Toole, N., Barbozad, P.S., Leighd, M.B., Selinger, L.B., Butler, G., Tsang, A., McAllister, T.A., Forster, R.J., in press. Snapshot of the eukaryotic gene expression in muskoxen rumen - A metatranscriptomic approach. PLoS One.
26. Robinson A.R., Mansfield S.D. Rapid analysis of poplar lignin monomer composition by a streamlined thioacidolysis procedure and near-infrared reflectance-based prediction modeling. Plant J. 2009, 58:706-714.
27. Roy B.P., Paice M.G., Archibald F.S., Misra S.K., Misiak L.E. Creation of metal-complexing agents, reduction of manganese dioxide, and promotion of manganese peroxidase-mediated Mn(III) production by cellobiose:quinone oxidoreductase from Trametes versicolor. J. Biol. Chem. 1994, 269:19745-19750.
28. Sato S., Feltus F., Iyer P., Tien M. The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak. Curr. Genet. 2009, 55:273-286.
29. Selitrennikoff C.P. Antifungal proteins. Appl. Environ. Microbiol. 2001, 67:2883-2894.
30. Sluiter, A., Hames, B., Ruiz, R., Scarlata, C., Sluiter, J., Templeton, D., Crocker, D., 2008. Determination of structural carbohydrates and lignin in biomass. NREL/TP-510-4261.
31. Talebnia F., Karakashev D., Angelidaki I. Production of bioethanol from wheat straw: an overview on pretreatment, hydrolysis and fermentation. Bioresour. Technol. 2010, 101:4744-4753.
32. Vanden Wymelenberg A., Gaskell J., Mozuch M., Kersten P., Sabat G., Martinez D., Cullen D. Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression. Appl. Environ. Microbiol. 2009, 75:4058-4068.
33. Wan C., Li Y. Microbial pretreatment of corn stover with Ceriporiopsis subvermispora for enzymatic hydrolysis and ethanol production. Bioresour. Technol. 2010, 101:6398-6403.
34. Wood T.M., Bhat K.M., Willis A.W., Scott T.K. Methods for measuring cellulase activities. Methods Enzymol. 1988, 160:87-112.
35. Xiao Z., Storms R., Tsang A. Microplate-based filter paper assay to measure total cellulase activity. Biotechnol. Bioeng. 2004, 88:832-837.