Two high-copy plasmids found in plants associated with strains of "Candidatus Phytoplasma asteris"

Plasmid

Volumn 66, Issue 2, 2011, Pages 122-127

  Petrzik, Karel ^a   Krawczyk, Krzysztof ^b   Zwolinska, Agnieszka ^b  

^a INSTITUTE OF PLANT MOLECULAR BIOLOGY   (Czech Republic)

^b INSTITUTE OF PLANT PROTECTION NATIONAL RESEARCH INSTITUTE   (Poland)

Author keywords

16Sr i b subgroup; 16Sr i c subgroup; Complete sequence; Phytoplasma asteris; Universal primers

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIAL PLANT DISEASE; BACTERIAL STRAIN; CONTROLLED STUDY; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYTOPLASMA; PHYTOPLASMA ASTERIS; PLASMID; RAPESEED; REHMANNIA;

BRASSICA NAPUS; HOST-PATHOGEN INTERACTIONS; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PHYLOGENY; PHYTOPLASMA; PLANT DISEASES; PLANTS; PLASMIDS; REHMANNIA;

BRASSICA NAPUS; CANDIDATUS PHYTOPLASMA; CANDIDATUS PHYTOPLASMA ASTERIS; ONION YELLOWS PHYTOPLASMA; PHYTOPLASMA ASTERIS; REHMANNIA GLUTINOSA;

EID: 80052966914     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2011.06.002     Document Type: Article

References (18)

1. Bai X., Zhang J., Ewing A., Miller S.A., Radek A.J., Shevchenko D.V., Tsukerman K., Walunas T., Lapidus A., Campbell J.W., Hogenhout S.A. Living with genome instability? The adaptation of phytoplasmas to diverse environments of their insect and plant hosts. J. Bacteriol. 2006, 155:3682-3696.
2. Firrao G., Gibb K., Streten C. Short taxonomic guide to the genus 'Candidatus phytoplasma'. J. Plant Pathol. 2005, 87:249-263.
3. Garnier T., Cole S.T. Identification and molecular genetic analysis of replication functions of bacteriocinogenic plasmid pIP404 from Clostridium perfringens. Plasmid 1988, 19:151-160.
4. Ishii Y., Kakizawa S., Hoshi A., Maejima K., Kagiwada S., Yamaji Y., Oshima K., Namba S. In the non-insect-transmissible line of onion yellows phytoplasma (OY-NIM), the plasmid-encoded transmembrane protein ORF3 lacks the major promoter region. Microbiology 2009, 155:2058-2067.
5. Kuske C.R., Kirkpatrick B.C. Identification and characterization of plasmids from the Western aster yellows mycoplasmalike organism. J. Bacteriol. 1990, 172:1628-1633.
6. Lee I.-M., Davis R.E., Hiruki C. Genetic relatedness among clover proliferation mycoplasma-like organisms (MLOs) and other MLOs investigated by nucleic acid hybridization and restriction fragment length polymorphism analyses. Appl. Environ. Microbiol. 1991, 57:3565-3569.
7. Liefting L.W., Shaw M.E., Kirkpatrick B.C. Sequence analysis of two plasmids from the phytoplasma beet leafhopper-transmitted virescence agent. Microbiology 2004, 150:1809-1817.
8. Liefting L.W., Andersen M.T., Lough T.J., Beever R.E. Comparative analysis of the plasmids from two isolates of 'Candidatus Phytoplasma australiense'. Plasmid 2006, 56:138-144.
9. Lin C.-l., Zhou T., Li H.-F., Fan Z.-F., Li Y., Piao C.-G., Tian G.-Z. Molecular characterisation of two plasmids from paulownia witches'-broom phytoplasma and detection of a plasmid encoded proteins in infected plants. Eur. J. Plant Pathol. 2009, 123:321-330.
10. Marcone C., Neimark H., Ragozzino A., Lauer U., Seemüller E. Chromosome sizes of phytoplasmas composing major phylogenetic groups and subgroups. Phytopathology 1999, 89:805-810.
11. Nishigawa H., Oshima K., Miyata S., Ugaki M., Namba S. Complete set of extrachromosomal DNAs from three pathogenic lines of onion yellows phytoplasma and use of PCR to differentiate each line. J. Gen. Plant Pathol. 2003, 69:194-198.
12. Panopoulos N.J., Peet R.C. The molecular-genetics of plant pathogenic bacteria and their plasmids. Annu. Rev. Phytopathol. 1985, 23:381-419.
13. Přibylová J., Špak J., Fránová J., Petrzik K. Association of aster yellows subgroup 16SrI-B phytoplasmas with a disease of Rehmannia glutinosa var. purpurea. Plant Pathol. 2001, 50:776-781.
14. Schneider B., Gibb K.S., Seemüller E. Sequence and RFLP analysis of the elongation factor Tu gene used in differentiation and classification of phytoplasmas. Microbiology 1997, 143:3381-3389.
15. Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
16. Toruño T.Y., Musić M.Š., Simi S., Nicolaisen M., Hogenhout S.A. Phytoplasma PMU1 exists as linear chromosomal and circular extrachromosomal elements and has enhanced expression in insect vectors compared with plant hosts. Mol. Microbiol. 2010, 77:1406-1415.
17. Tran-Nguyen L.T.T., Gibb K.S. Extrachromosomal DNA isolated from tomato big bud and Candidatus Phytoplasma australiense phytoplasma strains. Plasmid 2006, 56:153-166.
18. Ye F., Melcher U., Fletcher J. Molecular characterization of a gene encoding a membrane protein of Spiroplasma citri. Gene 1997, 189:95-100.