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Volumn 143, Issue 10, 1997, Pages 3381-3389

Sequence and RFLP analysis of the elongation factor Tu gene used in differentiation and classification of phytoplasmas

Author keywords

Classification; Differentiation; Elongation factor; PCR; Phytoplasmas

Indexed keywords

ELONGATION FACTOR TU;

EID: 0030782411     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-143-10-3381     Document Type: Article
Times cited : (221)

References (38)
  • 1
    • 0001314701 scopus 로고
    • Detection of DNA of plant pathogenic mycoplasma-like organisms by a polymerase chain reaction that amplifies a sequence of the 16S rRNA gene
    • Ahrens, U. & Seemüller, E. (1992). Detection of DNA of plant pathogenic mycoplasma-like organisms by a polymerase chain reaction that amplifies a sequence of the 16S rRNA gene. Phytopathology 82, 828-832.
    • (1992) Phytopathology , vol.82 , pp. 828-832
    • Ahrens, U.1    Seemüller, E.2
  • 2
    • 0027995105 scopus 로고
    • Detection of mycoplasmalike organisms in declining oaks by polymerase chain reaction
    • Ahrens, U. & Seemüller, E. (1994). Detection of mycoplasmalike organisms in declining oaks by polymerase chain reaction. Eur J For Pathol 24, 55-63.
    • (1994) Eur J For Pathol , vol.24 , pp. 55-63
    • Ahrens, U.1    Seemüller, E.2
  • 3
    • 84984119392 scopus 로고
    • Preparations of mycoplasma immunogens from plants and a comparison of polyclonal and monoclonal antibodies made against primula yellows MLO-associated antigens
    • Clark, M. F., Morton, A. & Buss, S. L. (1989). Preparations of mycoplasma immunogens from plants and a comparison of polyclonal and monoclonal antibodies made against primula yellows MLO-associated antigens. Ann Appl Biol 114, 111-124.
    • (1989) Ann Appl Biol , vol.114 , pp. 111-124
    • Clark, M.F.1    Morton, A.2    Buss, S.L.3
  • 4
    • 0030901583 scopus 로고    scopus 로고
    • 'Candidatus Phytoplasma australiense,' a new phytoplasma taxon associated with Australian grapevine yellows
    • Davis, R. E., Dally, E. L., Gundersen, D. E., Lee, I. M. & Habili, N. (1997). 'Candidatus Phytoplasma australiense,' a new phytoplasma taxon associated with Australian grapevine yellows. Int J Syst Bacteriol 47, 262-269.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 262-269
    • Davis, R.E.1    Dally, E.L.2    Gundersen, D.E.3    Lee, I.M.4    Habili, N.5
  • 5
    • 0000479431 scopus 로고
    • Isolation of plant DNA from fresh tissue
    • Doyle, J. J. & Doyle, J. L. (1990). Isolation of plant DNA from fresh tissue. Focus 12, 13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 6
    • 0019332116 scopus 로고
    • Portions of the gene encoding elongation factor Tu are highly conserved in prokaryotes
    • Filer, D. & Furano, A. V. (1980). Portions of the gene encoding elongation factor Tu are highly conserved in prokaryotes. J Biol Chem 255, 728-734.
    • (1980) J Biol Chem , vol.255 , pp. 728-734
    • Filer, D.1    Furano, A.V.2
  • 7
    • 0030069287 scopus 로고    scopus 로고
    • Phytoplasmas associated with papaya disease in Australia
    • Gibb, K. S., Persely, D. M., Schneider, B. & Thomas, J. E. (1996). Phytoplasmas associated with papaya disease in Australia. Plant Dis 80, 174-178.
    • (1996) Plant Dis , vol.80 , pp. 174-178
    • Gibb, K.S.1    Persely, D.M.2    Schneider, B.3    Thomas, J.E.4
  • 8
    • 0028048566 scopus 로고
    • Phylogeny of mycoplasmalike organisms (phytoplasmas): A basis for their classification
    • Gundersen, D. E., Lee, I. M., Rehner, S. A., Davis, R. E. & Kingsbury, D. T. (1994). Phylogeny of mycoplasmalike organisms (phytoplasmas): a basis for their classification. J Bacteriol 176, 5244-5254.
    • (1994) J Bacteriol , vol.176 , pp. 5244-5254
    • Gundersen, D.E.1    Lee, I.M.2    Rehner, S.A.3    Davis, R.E.4    Kingsbury, D.T.5
  • 9
    • 0030031124 scopus 로고    scopus 로고
    • Genomic diversity and differentiation among phytoplasma strains in 16S rRNA groups I (aster yellows and related phytoplasmas) and III (X-disease and related phytoplasmas)
    • Gundersen, D. E., Lee, I. M., Schaff, D. A., Harrison, N. A., Chang, C. J., Davis, R. E. & Kingsbury, D. T. (1996). Genomic diversity and differentiation among phytoplasma strains in 16S rRNA groups I (aster yellows and related phytoplasmas) and III (X-disease and related phytoplasmas). Int J Syst Bacteriol 46, 64-75.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 64-75
    • Gundersen, D.E.1    Lee, I.M.2    Schaff, D.A.3    Harrison, N.A.4    Chang, C.J.5    Davis, R.E.6    Kingsbury, D.T.7
  • 10
    • 0024598146 scopus 로고
    • Fast and sensitive multiple alignments on a microcomputer
    • Higgins, D. G. & Sharp, P. M. (1988). Fast and sensitive multiple alignments on a microcomputer. Comput Appl Biosci 5, 151-153.
    • (1988) Comput Appl Biosci , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 11
    • 0024841948 scopus 로고
    • Nucleotide sequence of the tuf gene of Mycoplasma gallisepticum
    • Inamine, J. M., Loechel, S. & Hu, P. C. (1989). Nucleotide sequence of the tuf gene of Mycoplasma gallisepticum. Nucleic Acids Res 17, 10126.
    • (1989) Nucleic Acids Res , vol.17 , pp. 10126
    • Inamine, J.M.1    Loechel, S.2    Hu, P.C.3
  • 12
    • 0029882910 scopus 로고    scopus 로고
    • Phylogeny based on elongation factor Tu reflects the phenotypic features of mycoplasmas better than that based on 16S rRNA
    • Kalma, V., Henrich, B. & Hadding, U. (1996). Phylogeny based on elongation factor Tu reflects the phenotypic features of mycoplasmas better than that based on 16S rRNA. Gene 171, 83-87.
    • (1996) Gene , vol.171 , pp. 83-87
    • Kalma, V.1    Henrich, B.2    Hadding, U.3
  • 14
    • 0026563857 scopus 로고
    • Phylogenetic relationships between the western aster yellows mycoplasmalike organism and other prokaryotes established by 16S rRNA gene sequence
    • Kuske, C. R. & Kirkpatrick, B. C. (1992). Phylogenetic relationships between the western aster yellows mycoplasmalike organism and other prokaryotes established by 16S rRNA gene sequence. Int J Syst Bacteriol 42, 226-233.
    • (1992) Int J Syst Bacteriol , vol.42 , pp. 226-233
    • Kuske, C.R.1    Kirkpatrick, B.C.2
  • 15
    • 0026424746 scopus 로고
    • Analysis of the nucleotide sequence of the Mycoplasma hominis tuf gene and its flanking region
    • Ladefoged, S. A. & Christiansen, G. (1991). Analysis of the nucleotide sequence of the Mycoplasma hominis tuf gene and its flanking region. FEMS Microbiol Lett 79, 133-140.
    • (1991) FEMS Microbiol Lett , vol.79 , pp. 133-140
    • Ladefoged, S.A.1    Christiansen, G.2
  • 16
    • 0008590442 scopus 로고
    • Differentiation of strains in the aster yellows mycoplasmalike organism strain cluster by serological assay with monoclonal antibodies
    • Lee, I.-M., Davis, R. E. & Hsu, H. T. (1993a). Differentiation of strains in the aster yellows mycoplasmalike organism strain cluster by serological assay with monoclonal antibodies. Plant Dis 77, 815-817.
    • (1993) Plant Dis , vol.77 , pp. 815-817
    • Lee, I.-M.1    Davis, R.E.2    Hsu, H.T.3
  • 17
    • 0001365577 scopus 로고
    • Universal amplification and analysis of pathogen 16S rDNA for classification and identification of mycoplasmalike organisms
    • Lee, I.-M., Hammond, W., Davis, R. E. & Gundersen, D. E. (1993b). Universal amplification and analysis of pathogen 16S rDNA for classification and identification of mycoplasmalike organisms. Phytopathology 83, 834-842.
    • (1993) Phytopathology , vol.83 , pp. 834-842
    • Lee, I.-M.1    Hammond, W.2    Davis, R.E.3    Gundersen, D.E.4
  • 18
    • 0028119788 scopus 로고
    • Use of mycoplasmalike organism (MLO) group-specific oligonucleotide primers for nested PCR assays to detect mixed MLO infections in a single host plant
    • Lee, I.-M., Gundersen, D. E., Hammond, R. W. & Davis, R. E. (1994). Use of mycoplasmalike organism (MLO) group-specific oligonucleotide primers for nested PCR assays to detect mixed MLO infections in a single host plant. Phytopathology 84, 559-566.
    • (1994) Phytopathology , vol.84 , pp. 559-566
    • Lee, I.-M.1    Gundersen, D.E.2    Hammond, R.W.3    Davis, R.E.4
  • 20
    • 0024418065 scopus 로고
    • 16S rRNA sequence indicates that plant pathogenic mycoplasmalike organisms are evolutionary distinct from animal mycoplasmas
    • Lim, P.-O. & Sears, B. B. (1989). 16S rRNA sequence indicates that plant pathogenic mycoplasmalike organisms are evolutionary distinct from animal mycoplasmas. J Bacteriol 171, 5901-5906.
    • (1989) J Bacteriol , vol.171 , pp. 5901-5906
    • Lim, P.-O.1    Sears, B.B.2
  • 21
    • 0026632895 scopus 로고
    • Evolutionary relationships of a plant-pathogenic mycoplasmalike organism and Acholeplasma laidlawii deduced from two ribosomal protein gene sequences
    • Lim, P.-O. & Sears, B. B. (1992). Evolutionary relationships of a plant-pathogenic mycoplasmalike organism and Acholeplasma laidlawii deduced from two ribosomal protein gene sequences. J Bacteriol 174, 2606-2611.
    • (1992) J Bacteriol , vol.174 , pp. 2606-2611
    • Lim, P.-O.1    Sears, B.B.2
  • 22
    • 0024853226 scopus 로고
    • Nucleotide sequence of the tuf gene from Mycoplasma genitalium
    • Loechel, S., Inamine, J. M. & Hu, P. C. (1989). Nucleotide sequence of the tuf gene from Mycoplasma genitalium. Nucleic Acids Res 17, 10127.
    • (1989) Nucleic Acids Res , vol.17 , pp. 10127
    • Loechel, S.1    Inamine, J.M.2    Hu, P.C.3
  • 23
    • 0025117682 scopus 로고
    • Complete nucleotide sequences of seven eubacterial genes coding for the elongation factor Tu: Functional, structural and phylogenetic evaluations
    • Ludwig, W., Weizenegger, M., Betzel, D., Leidel, E., Lenz, T., Ludvigsen, A., Möllenhoff, D., Wenzig, P. & Schleifer, K. H. (1990). Complete nucleotide sequences of seven eubacterial genes coding for the elongation factor Tu: functional, structural and phylogenetic evaluations. Arch Microbiol 153, 241-247.
    • (1990) Arch Microbiol , vol.153 , pp. 241-247
    • Ludwig, W.1    Weizenegger, M.2    Betzel, D.3    Leidel, E.4    Lenz, T.5    Ludvigsen, A.6    Möllenhoff, D.7    Wenzig, P.8    Schleifer, K.H.9
  • 25
    • 0025827003 scopus 로고
    • Sequence and expression in Escherichia coli of a Mycoplasma hominis gene encoding elongation factor Tu
    • Lüneberg, E., Kamla, V., Hadding, U. & Frosch, M. (1991). Sequence and expression in Escherichia coli of a Mycoplasma hominis gene encoding elongation factor Tu. Gene 102, 123-127.
    • (1991) Gene , vol.102 , pp. 123-127
    • Lüneberg, E.1    Kamla, V.2    Hadding, U.3    Frosch, M.4
  • 27
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needlman, S. B. & Wunsch, C. D. (1970). A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 48, 443-453.
    • (1970) J Mol Biol , vol.48 , pp. 443-453
    • Needlman, S.B.1    Wunsch, C.D.2
  • 28
    • 0030498534 scopus 로고    scopus 로고
    • A comparison of the phytoplasma associated with Australian grapevine yellows to other phytoplasmas in grapevine
    • Radovan, A. C., Gibb, K. S., Daire, X. & Boudonpadieu, E. (1996). A comparison of the phytoplasma associated with Australian grapevine yellows to other phytoplasmas in grapevine. Vitis 35, 189-194.
    • (1996) Vitis , vol.35 , pp. 189-194
    • Radovan, A.C.1    Gibb, K.S.2    Daire, X.3    Boudonpadieu, E.4
  • 30
    • 0027416816 scopus 로고
    • Classification of plant-pathogenic mycoplasma-like organisms using restriction-site analysis of PCR-amplified 16S rDNA
    • Schneider, B., Ahrens, U., Kirkpatrick, B. C. & Seemüller, E. (1993). Classification of plant-pathogenic mycoplasma-like organisms using restriction-site analysis of PCR-amplified 16S rDNA. J Gen Microbiol 139, 519-527.
    • (1993) J Gen Microbiol , vol.139 , pp. 519-527
    • Schneider, B.1    Ahrens, U.2    Kirkpatrick, B.C.3    Seemüller, E.4
  • 31
    • 0028887434 scopus 로고
    • Taxonomic relatedness and phylogenetic positions of phytoplasmas associated with diseases of faba bean, sunnhemp, sesame, soybean and eggplant
    • Schneider, B., Cousin, M. T., Klinkong, S. & Seemüller, E. (1995a). Taxonomic relatedness and phylogenetic positions of phytoplasmas associated with diseases of faba bean, sunnhemp, sesame, soybean and eggplant. J Plant Dis Prot 102, 225-232.
    • (1995) J Plant Dis Prot , vol.102 , pp. 225-232
    • Schneider, B.1    Cousin, M.T.2    Klinkong, S.3    Seemüller, E.4
  • 32
    • 0000231293 scopus 로고
    • Phylogenetic classification of plant pathogenic mycoplasma-like organisms or phytoplasmas
    • Edited by S. Razin & J. G. Tully. San Diego: Academic Press
    • Schneider, B., Seemüller, E., Smart, C. D. & Kirkpatrick, B. C. (1995b). Phylogenetic classification of plant pathogenic mycoplasma-like organisms or phytoplasmas. In Molecular and Diagnostic Procedures in Mycoplasmology, vol. 1, pp. 369-380. Edited by S. Razin & J. G. Tully. San Diego: Academic Press.
    • (1995) Molecular and Diagnostic Procedures in Mycoplasmology , vol.1 , pp. 369-380
    • Schneider, B.1    Seemüller, E.2    Smart, C.D.3    Kirkpatrick, B.C.4
  • 34
    • 0024570876 scopus 로고
    • Duplication of the tuf gene: A new insight into the phylogeny of eubacteria
    • Sela, S., Yogev, D., Razin, S. & Bercovier, H. (1989). Duplication of the tuf gene: a new insight into the phylogeny of eubacteria. J Bacteriol 171, 581-584.
    • (1989) J Bacteriol , vol.171 , pp. 581-584
    • Sela, S.1    Yogev, D.2    Razin, S.3    Bercovier, H.4
  • 36
    • 0028121046 scopus 로고
    • Phylogenetic relationship among members of the class Mollicutes deduced from rps3 gene sequences
    • Toth, K. F., Harrison, N. A. & Sears, B. B. (1994). Phylogenetic relationship among members of the class Mollicutes deduced from rps3 gene sequences. Int J Syst Bacteriol 44, 119-124.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 119-124
    • Toth, K.F.1    Harrison, N.A.2    Sears, B.B.3
  • 37
    • 0001856897 scopus 로고    scopus 로고
    • Differentiation and classification of aster yellows and related European phytoplasmas
    • Vibio, M., Bertaccini, A., Lee, I. M., Davis, R. E. & Clark, M. F. (1996). Differentiation and classification of aster yellows and related European phytoplasmas. Phytopathol Mediterr 35, 33-42.
    • (1996) Phytopathol Mediterr , vol.35 , pp. 33-42
    • Vibio, M.1    Bertaccini, A.2    Lee, I.M.3    Davis, R.E.4    Clark, M.F.5
  • 38
    • 38249030641 scopus 로고
    • Elongation factor (EF-Tu) gene probe detects polymorphism in Mycoplasma strains
    • Yogev, D., Sela, S., Bercovier, H. & Razin, S. (1988). Elongation factor (EF-Tu) gene probe detects polymorphism in Mycoplasma strains. FEMS Microbiol Lett 50, 145-149.
    • (1988) FEMS Microbiol Lett , vol.50 , pp. 145-149
    • Yogev, D.1    Sela, S.2    Bercovier, H.3    Razin, S.4


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