메뉴 건너뛰기




Volumn 5, Issue 10, 2011, Pages 1683-1691

Agriculture's impact on microbial diversity and associated fluxes of carbon dioxide and methane

Author keywords

agriculture; biodiversity; carbon dioxide; complementaritry hypothesis; ecosystem function; methane

Indexed keywords

CARBON DIOXIDE; METHANE;

EID: 80052963498     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2011.40     Document Type: Review
Times cited : (141)

References (54)
  • 1
    • 19944368795 scopus 로고    scopus 로고
    • Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forest
    • DOI 10.1007/s10533-004-0372-y
    • Balser TC, Firestone MK. (2005). Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forest. Biogeochemistry 73: 395-415. (Pubitemid 40747886)
    • (2005) Biogeochemistry , vol.73 , Issue.2 , pp. 395-415
    • Balser, T.C.1    Firestone, M.K.2
  • 2
    • 1542301490 scopus 로고    scopus 로고
    • Nitrogen as a regulatory factor of methane oxidation in soils and sediments
    • DOI 10.1016/S0168-6496(03)00304-0, PII S0168649603003040
    • Bodelier PL, Laanbroek HJ. (2004). Nitrogen as a regulatory factor of methane oxidation in soils and sediments. FEMS Microbiol Ecol 47: 265-277. (Pubitemid 38296603)
    • (2004) FEMS Microbiology Ecology , vol.47 , Issue.3 , pp. 265-277
    • Bodelier, P.L.E.1    Laanbroek, H.J.2
  • 3
    • 0030860238 scopus 로고    scopus 로고
    • Molecular microbial diversity in soils from eastern Amazonia: Evidence for unusual microorganisms and microbial population shifts associated with deforestation
    • Borneman J, Triplett EW. (1997). Molecular microbial diversity in soils from eastern Amazonia: Evidence for unusual microorganisms and microbial population shifts associated with deforestation. Appl Environ Microbiol 63: 2647-2653. (Pubitemid 27292855)
    • (1997) Applied and Environmental Microbiology , vol.63 , Issue.7 , pp. 2647-2653
    • Borneman, J.1    Triplett, E.W.2
  • 4
    • 0033939308 scopus 로고    scopus 로고
    • The functional significance of denitrifier community composition in a terrestrial ecosystem
    • Cavigelli MA, Robertson GP. (2000). The functional significance of denitrifier community composition in a terrestrial ecosystem. Ecology 81: 1402-1414. (Pubitemid 30446174)
    • (2000) Ecology , vol.81 , Issue.5 , pp. 1402-1414
    • Cavigelli, M.A.1    Robertson, G.P.2
  • 5
    • 0001463548 scopus 로고
    • Non-parametric estimation of the number of classes in a population
    • Chao A. (1984). Non-parametric estimation of the number of classes in a population. Scand J Stat 11: 265-270.
    • (1984) Scand J Stat , vol.11 , pp. 265-270
    • Chao, A.1
  • 6
    • 41449092760 scopus 로고    scopus 로고
    • Relationships between soil respiration and soil moisture
    • Cook FJ, Orchard VA. (2008). Relationships between soil respiration and soil moisture. Soil Biol Biochem 40: 1013-1018.
    • (2008) Soil Biol Biochem , vol.40 , pp. 1013-1018
    • Cook, F.J.1    Orchard, V.A.2
  • 7
    • 36448931369 scopus 로고
    • (online). W. K. Kellogg Biological Station Long-Term Ecological Research Project, Michigan State University, Hickory Corners, MI. Available at, (verified 2 February 2011)
    • Crum JR, Collins HP. (1995). KBS Soils (online). W. K. Kellogg Biological Station Long-Term Ecological Research Project, Michigan State University, Hickory Corners, MI. Available at http://lter.kbs.msu.edu/about/ site-description/soils.php(verified 2 February 2011).
    • (1995) KBS Soils
    • Crum, J.R.1    Collins, H.P.2
  • 8
    • 77952276202 scopus 로고    scopus 로고
    • Atmospheric methane-oxidizing communities differ in European Beech and Norway Spruce soils
    • Degelmann DM, Borken W, Drake HL, Kolb S. (2010). Atmospheric methane-oxidizing communities differ in European Beech and Norway Spruce soils. Appl Environ Microbiol 76: 3228-3235.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 3228-3235
    • Degelmann, D.M.1    Borken, W.2    Drake, H.L.3    Kolb, S.4
  • 9
    • 76649107903 scopus 로고    scopus 로고
    • Methanotrophic communities in Brazilian ferralsols from naturally forested, afforested, and agricultural sites
    • Dorr N, Glaser B, Kolb S. (2010). Methanotrophic communities in Brazilian ferralsols from naturally forested, afforested, and agricultural sites. Appl Environ Microbiol 76: 1307-1310.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 1307-1310
    • Dorr, N.1    Glaser, B.2    Kolb, S.3
  • 14
    • 0032965897 scopus 로고    scopus 로고
    • Soil and sediment biodiversity: Cross-system comparisons and large-scale effects
    • Groffman PM, Bohlen PJ. (1999). Soil and sediment biodiversity-cross- system comparisons and largescale effects. Bioscience 49: 139-148. (Pubitemid 29060050)
    • (1999) BioScience , vol.49 , Issue.2 , pp. 139-148
    • Groffman, P.M.1    Bohlen, P.J.2
  • 15
    • 0031764264 scopus 로고    scopus 로고
    • + inhibition
    • Gulledge J, Schimel JP. (1998). Low-concentration kinetics of atmospheric CH4 oxidation in soil and mechanism of NH4+ inhibition. Appl Environ Microbiol 64: 4291-4298. (Pubitemid 28537990)
    • (1998) Applied and Environmental Microbiology , vol.64 , Issue.11 , pp. 4291-4298
    • Gulledge, J.1    Schimel, J.P.2
  • 16
    • 34748886657 scopus 로고    scopus 로고
    • PAST: Paleontological statistics software package for education and data analysis
    • Hammer Ø, Harper DAT, Ryan PD. (2001). PAST: Paleontological statistics software package for education and data analysis. Palaeontol Electron 4: 1-9.
    • (2001) Palaeontol Electron , vol.4 , pp. 1-9
    • Hammer, Ø.1    Harper, D.A.T.2    Ryan, P.D.3
  • 17
    • 0028791540 scopus 로고
    • Evidence that participate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
    • Holmes AJ, Costello A, Lidstrom ME, Murrell JC. (1995). Evidence that participate methane monooxygenase and ammonia monooxygenase may be evolutionarily related. FEMS Microbiol Lett 132: 203-208.
    • (1995) FEMS Microbiol Lett , vol.132 , pp. 203-208
    • Holmes, A.J.1    Costello, A.2    Lidstrom, M.E.3    Murrell, J.C.4
  • 18
    • 18444409388 scopus 로고    scopus 로고
    • Methane-oxidizing bacteria in a California upland grassland soil: Diversity and response to simulated global change
    • DOI 10.1128/AEM.71.5.2642-2652.2005
    • Horz H-P, Rich V, Avrahami S, Bohannan BJM. (2005). Methane-oxidizing bacteria in a California upland grassland soil: Diversity and response to simulated global change. Appl Environ Microbiol 71: 2642-2652. (Pubitemid 40647011)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.5 , pp. 2642-2652
    • Horz, H.-P.1    Rich, V.2    Avrahami, S.3    Bohannan, B.J.M.4
  • 19
  • 21
    • 80052961152 scopus 로고    scopus 로고
    • Team CW, Pachauri RK, Reisinger A (eds). Contribution of Working Groups I, II and III to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change. IPCC: Geneva, Switzerland
    • IPCC, IPCC (2007). In: Team CW, Pachauri RK, Reisinger A (eds). Climate Change 2007: Synthesis Report. Contribution of Working Groups I, II and III to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change. IPCC: Geneva, Switzerland.
    • (2007) Climate Change 2007: Synthesis Report
  • 22
    • 34447324898 scopus 로고    scopus 로고
    • Stability and diversity of ecosystems
    • DOI 10.1126/science.1133258
    • Ives AR, Carpenter SR. (2007). Stability and diversity of ecosystems. Science 317: 58-62. (Pubitemid 47056443)
    • (2007) Science , vol.317 , Issue.5834 , pp. 58-62
    • Ives, A.R.1    Carpenter, S.R.2
  • 23
    • 70349913850 scopus 로고    scopus 로고
    • Distribution of atmospheric methane oxidation and methanotrophic communities on Hawaiian volcanic deposits and soils
    • King GM, Nanba K. (2008). Distribution of atmospheric methane oxidation and methanotrophic communities on Hawaiian volcanic deposits and soils. Microbes Environ 23: 326-330.
    • (2008) Microbes Environ , vol.23 , pp. 326-330
    • King, G.M.1    Nanba, K.2
  • 25
    • 70350261490 scopus 로고    scopus 로고
    • What is microbial community ecology?
    • Konopka A. (2009). What is microbial community ecology? ISME J 3: 1223-1230.
    • (2009) ISME J , vol.3 , pp. 1223-1230
    • Konopka, A.1
  • 27
    • 34249033324 scopus 로고    scopus 로고
    • Molecular characterization of methanotrophic communities in forest soils that consume atmospheric methane
    • DOI 10.1111/j.1574-6941.2007.00308.x
    • Lau E, Ahmad A, Steudler PA, Cavanaugh CM. (2007). Molecular characterization of methanotrophic communities in forest soils. FEMS Microbiol Ecol 60: 490-500. (Pubitemid 46802118)
    • (2007) FEMS Microbiology Ecology , vol.60 , Issue.3 , pp. 490-500
    • Lau, E.1    Ahmad, A.2    Steudler, P.A.3    Cavanaugh, C.M.4
  • 28
    • 26844551533 scopus 로고    scopus 로고
    • Analysis of methane monooxygenase genes in mono lake suggests that increased methane oxidation activity may correlate with a change in methanotroph community structure
    • DOI 10.1128/AEM.71.10.6458-6462.2005
    • Lin JL, Joye SB, Scholten JCM, Schafer H, McDonald IR, Murrell JC. (2005). Analysis of methane monooxygenase genes in mono lake suggests that increased methane oxidation activity may correlate with a change in methanotroph community structure. Appl Environ Microbiol 71: 6458-6462. (Pubitemid 41456958)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.10 , pp. 6458-6462
    • Lin, J.-L.1    Joye, S.B.2    Scholten, J.C.M.3    Schafer, H.4    McDonald, I.R.5    Murrell, J.C.6
  • 29
    • 0035811475 scopus 로고    scopus 로고
    • Partitioning selection and complementarity in biodiversity experiments
    • DOI 10.1038/35083573
    • Loreau M, Hector A. (2001). Partitioning selection and complementarity in biodiversity experiments. Nature 412: 72-76. (Pubitemid 32851511)
    • (2001) Nature , vol.412 , Issue.6842 , pp. 72-76
    • Loreau, M.1    Hector, A.2
  • 30
    • 55349107213 scopus 로고    scopus 로고
    • Inhibition of atmospheric methane oxidation by monoterpenes in Norway spruce and European beech soils
    • Maurer D, Kolb S, Haumaier L, Borken W. (2008). Inhibition of atmospheric methane oxidation by monoterpenes in Norway spruce and European beech soils. Soil Biol Biochem 40: 3014-3020.
    • (2008) Soil Biol Biochem , vol.40 , pp. 3014-3020
    • Maurer, D.1    Kolb, S.2    Haumaier, L.3    Borken, W.4
  • 31
    • 44849118465 scopus 로고    scopus 로고
    • Acute impact of agriculture on high-affinity methanotrophic bacterial populations
    • DOI 10.1111/j.1462-2920.2008.01587.x
    • Maxfield PJ, Hornibrook ERC, Evershed RP. (2008). Acute impact of agriculture on high-affinity methanotrophic bacterial populations. Environ Microbiol 10: 1917-1924. (Pubitemid 351793612)
    • (2008) Environmental Microbiology , vol.10 , Issue.7 , pp. 1917-1924
    • Maxfield, P.J.1    Hornibrook, E.R.C.2    Evershed, R.P.3
  • 33
    • 79956266974 scopus 로고    scopus 로고
    • Environmental distribution and abundance of the facultative methanotroph methylocella
    • e-pub ahead of print; doi:10.1038/ismej.2010.190
    • Rahman MT, Crombie A, Chen Y, Stralis-Pavese N, Bodrossy L, Meir P et al. (2010). Environmental distribution and abundance of the facultative methanotroph methylocella. ISME J, e-pub ahead of print; doi:10.1038/ismej.2010. 190.
    • (2010) ISME J
    • Rahman, M.T.1    Crombie, A.2    Chen, Y.3    Stralis-Pavese, N.4    Bodrossy, L.5    Meir, P.6
  • 35
    • 0034665720 scopus 로고    scopus 로고
    • Greenhouse gases in intensive agriculture: Contributions of individual gases to the radiative forcing of the atmosphere
    • Robertson GP, Paul EA, Harwood RR. (2000). Greenhouse gases in intensive agriculture: Contributions of individual gases to the radiative forcing of the atmosphere. Science 289: 1922-1925.
    • (2000) Science , vol.289 , pp. 1922-1925
    • Robertson, G.P.1    Paul, E.A.2    Harwood, R.R.3
  • 38
    • 0000980499 scopus 로고
    • Ecosytem consequences of microbial diversity and community structure
    • Chapin III FS and Korner C (eds. Springer-Verlag: Berlin
    • Schimel JP. (1995). Ecosytem consequences of microbial diversity and community structure. In: Chapin III FS and Korner C (eds). Arctic and Alpine Biodiversity: Patterns, Causes and Ecosystem Consequences. Springer-Verlag: Berlin, pp 239-269.
    • (1995) Arctic and Alpine Biodiversity: Patterns, Causes and Ecosystem Consequences , pp. 239-269
    • Schimel, J.P.1
  • 39
    • 0033984855 scopus 로고    scopus 로고
    • Soil respiration and the global carbon cycle
    • DOI 10.1023/A:1006247623877
    • Schlesinger WH, Andrews JA. (2000). Soil respiration and the global carbon cycle. Biogeochemistry 48: 7-20. (Pubitemid 30065096)
    • (2000) Biogeochemistry , vol.48 , Issue.1 , pp. 7-20
    • Schlesinger, W.H.1    Andrews, J.A.2
  • 40
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • DOI 10.1128/AEM.71.3.1501-1506.2005
    • Schloss PD, Handelsman J. (2005). Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-1506. (Pubitemid 40396689)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.3 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 42
    • 0033746484 scopus 로고    scopus 로고
    • Oxidation of atmospheric methane in Northern European soils, comparison with other ecosystems, and uncertainties in the global terrestrial sink
    • Smith KA, Dobbie KE, Ball BC, Bakken LR, Sitaula BK, Hansen S et al. (2000). Oxidation of atmospheric methane in Northern European soils, comparison with other ecosystems, and uncertainties in the global terrestrial sink. Global Change Biol 6: 791-803.
    • (2000) Global Change Biol , vol.6 , pp. 791-803
    • Smith, K.A.1    Dobbie, K.E.2    Ball, B.C.3    Bakken, L.R.4    Sitaula, B.K.5    Hansen, S.6
  • 45
    • 27644459973 scopus 로고    scopus 로고
    • Methane oxidation in forest, successional, and no-till agricultural ecosystems: Effects of nitrogen and soil disturbance
    • Suwanwaree P, Robertson GP. (2005). Methane oxidation in forest, successional, and no-till agricultural ecosystems: Effects of nitrogen and soil disturbance. Soil Sci Am J 69: 1722-1779.
    • (2005) Soil Sci Am J , vol.69 , pp. 1722-1779
    • Suwanwaree, P.1    Robertson, G.P.2
  • 47
    • 0035955396 scopus 로고    scopus 로고
    • Diversity and productivity in a long-term grassland experiment
    • DOI 10.1126/science.1060391
    • Tilman D, Reich PB, Knops J, Wedin D, Mielke T, Lehman C. (2001). Diversity and productivity in a long-term grassland experiment. Science 294: 843-845. (Pubitemid 33032100)
    • (2001) Science , vol.294 , Issue.5543 , pp. 843-845
    • Tilman, D.1    Reich, P.B.2    Knops, J.3    Wedin, D.4    Mielke, T.5    Lehman, C.6
  • 48
    • 33745259863 scopus 로고    scopus 로고
    • Biodiversity and ecosystem stability in a decade-long grassland experiment
    • DOI 10.1038/nature04742, PII N04742
    • Tilman D, Reich PB, Knops JMH. (2006). Biodiversity and ecosystem stability in a decade-long grassland experiment. Nature 441: 629-632. (Pubitemid 43927293)
    • (2006) Nature , vol.441 , Issue.7093 , pp. 629-632
    • Tilman, D.1    Reich, P.B.2    Knops, J.M.H.3
  • 49
    • 67649516991 scopus 로고    scopus 로고
    • In situ measures of methanotroph activity in upland soils: A reaction-diffusion model and field observation of water stress
    • von Fischer JC, Butters G, Duchateau PC, Thelwell RJ, Siller R. (2009). In situ measures of methanotroph activity in upland soils: A reaction-diffusion model and field observation of water stress. J Geophys Res 114: G01015.
    • (2009) J Geophys Res , vol.114
    • Von Fischer, J.C.1    Butters, G.2    Duchateau, P.C.3    Thelwell, R.J.4    Siller, R.5
  • 50
    • 63849276684 scopus 로고    scopus 로고
    • Diversity effects in early-and mid-successional species pools along a nitrogen gradient
    • Wacker L, Baudois O, Eichenberger-Glinz S, Schmid B. (2009). Diversity effects in early-and mid-successional species pools along a nitrogen gradient. Ecology 90: 637-648.
    • (2009) Ecology , vol.90 , pp. 637-648
    • Wacker, L.1    Baudois, O.2    Eichenberger-Glinz, S.3    Schmid, B.4
  • 52
    • 0345016271 scopus 로고    scopus 로고
    • Plant diversity, soil microbial communities, and ecosystem function: Are there any links?
    • Zak DR, Holmes WE, White DC, Peacock AD, Tilman D. (2003). Plant diversity, soil microbial communities, and ecosystem function: Are there any links? Ecology 84: 2042-2050. (Pubitemid 37435679)
    • (2003) Ecology , vol.84 , Issue.8 , pp. 2042-2050
    • Zak, D.R.1    Holmes, W.E.2    White, D.C.3    Peacock, A.D.4    Tilman, D.5
  • 54
    • 35348919478 scopus 로고    scopus 로고
    • Effects of grazing by sheep on the structure of methane-oxidizing bacterial community of steppe soil
    • DOI 10.1016/j.soilbio.2007.05.020, PII S003807170700226X
    • Zhou X-Q, Wang Y-F, Huang X-Z, Hao Y-B, Tian J-Q, Wang J-Z. (2008). Effects of grazing by sheep on the structure of methane-oxidizing bacterial community of steppe soil. Soil Biol Biochem 40: 258-261. (Pubitemid 47588309)
    • (2008) Soil Biology and Biochemistry , vol.40 , Issue.1 , pp. 258-261
    • Zhou, X.-Q.1    Wang, Y.-F.2    Huang, X.-Z.3    Hao, Y.-B.4    Tian, J.-Q.5    Wang, J.-Z.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.