Mass spectrometry-based quantification of pseudouridine in RNA

Journal of the American Society for Mass Spectrometry

Volumn 22, Issue 8, 2011, Pages 1363-1372

  Addepalli, Balasubrahmanyam ^a   Limbach, Patrick A ^a  

^a UNIVERSITY OF CINCINNATI   (United States)

Author keywords

Detection of RNA modifications; Mass spectrometry; Oligonucleotides; Pseudouridine quantification; Selected reaction monitoring; SRM; tRNA

Indexed keywords

CARBODIIMIDES; CHEMICAL DERIVATIZATION; DIRECT DETECTION; FRAGMENT IONS; LC-MS/MS; LINEAR RELATIONSHIPS; LIQUID CHROMATOGRAPHY-TANDEM MASS SPECTROMETRY; ORIGINAL SAMPLE; PRIMER EXTENSION; PSEUDOURIDINE; QUALITATIVE AND QUANTITATIVE ANALYSIS; QUALITATIVE INFORMATION; REVERSE TRANSCRIPTASES; RNA POPULATION; SELECTED REACTION MONITORING; SRM; TRNA;

ASSAYS; ESCHERICHIA COLI; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; OLIGONUCLEOTIDES; SULFUR COMPOUNDS;

RNA;

OLIGONUCLEOTIDE; PSEUDOURIDINE; TRANSFER RNA;

CHEMICAL MODIFICATION; CHEMICAL REACTION; COLLISIONALLY ACTIVATED DISSOCIATION; ESCHERICHIA COLI; LIQUID CHROMATOGRAPHY; QUALITATIVE ANALYSIS; QUANTITATIVE ANALYSIS; REVIEW; RNA ANALYSIS; STRAIN DIFFERENCE; TANDEM MASS SPECTROMETRY;

BASE SEQUENCE; CALIBRATION; CHROMATOGRAPHY, LIQUID; CME-CARBODIIMIDE; ESCHERICHIA COLI; LEAST-SQUARES ANALYSIS; MOLECULAR SEQUENCE DATA; PSEUDOURIDINE; RNA, BACTERIAL; RNA, TRANSFER; STATIC ELECTRICITY; TANDEM MASS SPECTROMETRY;

ESCHERICHIA COLI;

EID: 80052650209     PISSN: 10440305     EISSN: 18791123     Source Type: Journal    
DOI: 10.1007/s13361-011-0137-5     Document Type: Review

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