Exploring serological classification tree model of active pulmonary tuberculosis by magnetic beads pretreatment and MALDI-TOF MS analysis

Scandinavian Journal of Immunology

Volumn 74, Issue 4, 2011, Pages 397-405

  Deng, C ^a   Lin, M ^b   Hu, C ^a   Li, Y ^a,b   Gao, Y ^c   Cheng, X ^b   Zhang, F ^a   Dong, M ^b  

^a PEKING UNION MEDICAL COLLEGE HOSPITAL   (China)

^b 309TH HOSPITAL OF PLA   (China)

^c INSTITUTE OF BASIC MEDICAL SCIENCES   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ADOLESCENT; ADULT; AGED; ARTICLE; CATION EXCHANGE; CLASSIFICATION TREE MODEL; COMPUTER PROGRAM; CONTROLLED STUDY; DISEASE CLASSIFICATION; FEMALE; HUMAN; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MALE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MODEL; PATHOGENESIS; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SMEAR; WEAK CATIONIC EXCHANGE MAGNETIC BEAD;

ADOLESCENT; ADULT; AGED; BIOLOGICAL MARKERS; FEMALE; HUMANS; IMMUNOMAGNETIC SEPARATION; LUNG; MALE; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TUBERCULOSIS, PULMONARY; YOUNG ADULT;

EID: 80052647347     PISSN: 03009475     EISSN: 13653083     Source Type: Journal    
DOI: 10.1111/j.1365-3083.2011.02590.x     Document Type: Article

References (28)

1. Bello AK, Njoku CH. Tuberculosis: current trends in diagnosis and treatment. Niger J Clin Pract 2005;8:118-24.
2. World Health Organization. Global tuberculosis control 2010.
3. Ma Z, Lienhardt C, McIlleron H, Nunn AJ, Wang X. Global tuberculosis drug development pipeline: the need and the reality. Lancet 2010;375:2100-9.
4. Chamie G, Luetkemeyer A, Charlebois E, Havlir DV. Tuberculosis as part of the natural history of HIV infection in developing countries. Clin Infect Dis 2010;50 (Suppl 3):S245-54.
5. Agranoff D, Fernandez-Reyes D, Papadopoulos MC et al. Identification of diagnostic markers for tuberculosis by proteomic fingerprinting of serum. Lancet 2006;368:1012-21.
6. Bahk YY, Kim SA, Kim JS et al. Antigens secreted from Mycobacterium tuberculosis: identification by proteomics approach and test for diagnostic marker. Proteomics 2004;4:3299-307.
7. Målen H, Berven FS, Fladmark KE, Wiker HG. Comprehensive analysis of exported proteins from Mycobacterium tuberculosis H37Rv. Proteomics 2007;7:1702-18.
8. Målen H, Søfteland T, Wiker HG. Antigen analysis of Mycobacterium tuberculosis H37Rv culture filtrate proteins. Scand J Immunol 2008;67:245-52.
9. Kashyap RS, Dobos KM, Belisle JT et al. Demonstration of components of antigen 85 complex in cerebrospinal fluid of tuberculous meningitis patients. Clin Diagn Lab Immunol 2005;12:752-8.
10. Deenadayalan A, Heaslip D, Rajendiran AA et al. Immunoproteomic identification of human T cell antigens of Mycobacterium tuberculosis that differentiate healthy contacts from tuberculosis patients. Mol Cell Proteomics 2010;9:538-49.
11. Deenadayalan A, Sundaramurthi JC, Raja A. Immunological and proteomic analysis of preparative isoelectric focusing separated culture filtrate antigens of Mycobacterium tuberculosis. Exp Mol Pathol 2010;88:156-62.
12. Borsuk S, Newcombe J, Mendum TA, Dellagostin OA, McFadden J. Identification of proteins from tuberculin purified protein derivative (PPD) by LC-MS/MS. Tuberculosis (Edinb) 2009;89:423-30.
13. Cho YS, Lee SE, Ko YJ et al. Definition of purified enzyme-linked immunosorbent assay antigens from the culture filtrate protein of Mycobacterium bovis by proteomic analysis. J Immunoassay Immunochem 2009;30:291-304.
14. Meikle V, Alito A, Llera AS et al. Identification of novel Mycobacterium bovis antigens by dissection of crude protein fractions. Clin Vaccine Immunol 2009;16:1352-9.
15. Baumann S, Ceglarek U, Fiedler GM, Lembcke J, Leichtle A, Thiery J. Standardized approach to proteome profiling of human serum based on magnetic bead separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Clin Chem 2005;51:973-80.
16. Lu HB, Zhou JH, Ma YY et al. Five serum proteins identified using SELDI-TOF-MS as potential biomarkers of gastric cancer. Jpn J Clin Oncol 2010;40:336-42.
17. Niu Q, Huang Z, Shi Y, Wang L, Pan X, Hu C. Specific serum protein biomarkers of rheumatoid arthritis detected by MALDI-TOF-MS combined with magnetic beads. Int Immunol 2010;22:611-8.
18. Wang QT, Li YZ, Liang YF et al. Construction of a multiple myeloma diagnostic model by magnetic bead-based MALDI-TOF mass spectrometry of serum and pattern recognition software. Anat Rec (Hoboken) 2009;292:604-10.
19. Taurines R, Dudley E, Conner AC et al. Serum protein profiling and proteomics in autistic spectrum disorder using magnetic bead-assisted mass spectrometry. Eur Arch Psychiatry Clin Neurosci 2010;260:249-55.
20. World Health Organization; International Union Against Tuberculosis and Lung Disease; Royal Netherlands Tuberculosis Association. Revised international definitions in tuberculosis control. Int J Tuberc Lung Dis 2001;5:213-5.
21. Winje BA, Mannsaker T, Heldal E, Dahle UR. Forebygging og kontroll av tuberkulose, en veileder (Norwegian) [Guidelines for prevention and control of tuberculosis], 7th edn. Oslo: Nasjonalt Folkehelseinstitutt, 2002.
22. Fung ET, Enderwick C. ProteinChip clinical proteomics: computational challenges and solutions. BioTechniques 2002; 34-8 (Suppl.): 40-1.
23. Wiesner A. Detection of tumor markers with ProteinChip technology. Curr Pharm Biotechnol 2004;5:45-67.
24. Villanueva J, Philip J, DeNoyer L, Tempst P. Data analysis of assorted serum peptidome profiles. Nat Protoc 2007;2:588-602.
25. Breiman L, Friedman JH, Olshen RA, Stone CJ. Classification and regression trees. Belmont, California: Wadsworth, 1984.
26. Zheng ZG, Yu HQ, Ling ZQ, Mou HZ, Deng HT, Mao WM. Comprehensive profiling of the low molecular weight proteins and peptides in weak cation exchange beads human serum retentate. Protein Pept Lett 2011;18:498-506.
27. Kanaya AM, Glidden DV, Chambers HF. Identifying pulmonary tuberculosis in patients with negative sputum smear results. Chest 2001;120:349-55.
28. Liu Q, Chen X, Hu C et al. Serum protein profiling of smear-positive and smear-negative pulmonary tuberculosis using SELDI-TOF mass spectrometry. Lung 2010;188:15-23.