Use of primer selection and restriction enzymes to assess bacterial community diversity in an agricultural soil used for potato production via terminal restriction fragment length polymorphism

Applied Microbiology and Biotechnology

Volumn 91, Issue 4, 2011, Pages 1193-1202

  Fortuna, Ann Marie ^a   Marsh, Terence L ^b   Honeycutt, C Wayne ^c   Halteman, William A ^d  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b MICHIGAN STATE UNIVERSITY   (United States)

^c USDA NRCS   (United States)

^d UNIVERSITY OF MAINE   (United States)

Author keywords

63F; 8 27F; Bacterial community diversity; T RFLP

Indexed keywords

16S RIBOSOMAL RNA; 16S RRNA GENE; 63F; 8-27F; AGRICULTURAL SOILS; BACTERIAL COMMUNITY; BACTERIAL DIVERSITY; BACTERIAL POPULATION; DOMAIN SPECIFIC; ENVIRONMENTAL VARIABLES; HORDEUM VULGARE; LAND-USE MANAGEMENT; MULTIVARIATE ANALYSIS OF VARIANCES; REDUNDANCY ANALYSIS; RESTRICTION ENZYMES; SOLANUM TUBEROSUM; T-RFLP; TARGET REGIONS; TERMINAL RESTRICTION FRAGMENT LENGTH POLYMORPHISMS; TERMINAL RESTRICTION FRAGMENTS;

CATALYSTS; ENZYMES; GENES; MULTIVARIANT ANALYSIS; NATURAL LANGUAGE PROCESSING SYSTEMS; RATING; RNA; SOILS;

BACTERIOLOGY;

PRIMER DNA; RESTRICTION ENDONUCLEASE; RNA 16S;

AGRICULTURAL SOIL; AMPLIFICATION; CROP PRODUCTION; ENVIRONMENTAL FACTOR; ENZYME ACTIVITY; LAND MANAGEMENT; LAND USE; MICROBIAL COMMUNITY; MULTIVARIATE ANALYSIS; POLYMORPHISM; POPULATION DYNAMICS; POTATO; RESEARCH WORK; SOIL MICROORGANISM; VARIANCE ANALYSIS;

ARTICLE; BARLEY; CLOVER; CONTROLLED STUDY; CROP PRODUCTION; ENZYME SPECIFICITY; LAND USE; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; MOLECULAR RECOGNITION; NONHUMAN; POTATO; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RNA SEQUENCE; SOIL; SOLANUM; TERMINAL RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

BACTERIA; BACTERIOLOGICAL TECHNIQUES; BIODIVERSITY; DNA PRIMERS; DNA RESTRICTION ENZYMES; DNA, BACTERIAL; DNA, RIBOSOMAL; HORDEUM; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, RIBOSOMAL, 16S; SOIL MICROBIOLOGY; SOLANUM TUBEROSUM; TRIFOLIUM;

BACTERIA (MICROORGANISMS); HORDEUM; HORDEUM VULGARE SUBSP. VULGARE; SOLANUM TUBEROSUM; TRIFOLIUM; TRIFOLIUM INCARNATUM;

EID: 80052645059     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-011-3363-7     Document Type: Article

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