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Volumn 416, Issue 2, 2011, Pages 218-227

Selective permeabilization for the high-throughput measurement of compartmented enzyme activities in mammalian cells

Author keywords

CHO; Compartmentation; Kinetics; Mammalian cell; Metabolic flux; Metabolism

Indexed keywords

CELL CULTURE; CELL MEMBRANES; ENZYME KINETICS; MAMMALS; METABOLISM; MITOCHONDRIA;

EID: 80052643002     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2011.05.039     Document Type: Article
Times cited : (34)

References (33)
  • 1
    • 25144492110 scopus 로고    scopus 로고
    • Approximative kinetic formats used in metabolic network modeling
    • DOI 10.1002/bit.20558
    • J.J. Heijnen, Approximative kinetic formats used in metabolic network modeling, Biotechnol. Bioeng. 91 (2005) 534-545. (Pubitemid 41335491)
    • (2005) Biotechnology and Bioengineering , vol.91 , Issue.5 , pp. 534-545
    • Heijnen, J.J.1
  • 3
    • 84882940039 scopus 로고    scopus 로고
    • Metabolic flux analysis in systems biology of mammalian cells
    • in press. doi:10.1007/10-2011-99
    • J. Niklas, E. Heinzle, Metabolic flux analysis in systems biology of mammalian cells, Adv. Biochem. Eng. Biotechnol., in press. doi:10.1007/10-2011- 99.
    • Adv. Biochem. Eng. Biotechnol.
    • Niklas, J.1    Heinzle, E.2
  • 4
    • 77955664106 scopus 로고    scopus 로고
    • Measurement of key metabolic enzyme activities in mammalian cells using rapid and sensitive microplate-based assays
    • R. Janke, Y. Genzel, A. Wahl, U. Reichl, Measurement of key metabolic enzyme activities in mammalian cells using rapid and sensitive microplate-based assays, Biotechnol. Bioeng. 107 (2010) 566-581.
    • (2010) Biotechnol. Bioeng. , vol.107 , pp. 566-581
    • Janke, R.1    Genzel, Y.2    Wahl, A.3    Reichl, U.4
  • 5
    • 0032486571 scopus 로고    scopus 로고
    • Fluxes and enzyme activities in central metabolism of myeloma cells grown in chemostat culture
    • DOI 10.1002/(SICI)1097-0290(19980705)59:1<28::AID-BIT5>3.0.CO;2-V
    • N. Vriezen, J.P. van Dijken, Fluxes and enzyme activities in central metabolism of myeloma cells grown in chemostat culture, Biotechnol. Bioeng. 59 (1998) 28-39. (Pubitemid 28232326)
    • (1998) Biotechnology and Bioengineering , vol.59 , Issue.1 , pp. 28-39
    • Vriezen, N.1    Van Dijken, J.P.2
  • 6
    • 35348981360 scopus 로고    scopus 로고
    • Metabolic flux engineering of l-lysine production in Corynebacterium glutamicum-over expression and modification of G6P dehydrogenase
    • DOI 10.1016/j.jbiotec.2007.05.026, PII S0168165607003860, Advances in Biochemical Engineering Science
    • J. Becker, C. Klopprogge, A. Herold, O. Zelder, C.J. Bolten, C. Wittmann, Metabolic flux engineering of l-lysine production in Corynebacterium glutamicum: Overexpression and modification of G6P dehydrogenase, J. Biotechnol. 132 (2007) 99-109. (Pubitemid 47599710)
    • (2007) Journal of Biotechnology , vol.132 , Issue.2 , pp. 99-109
    • Becker, J.1    Klopprogge, C.2    Herold, A.3    Zelder, O.4    Bolten, C.J.5    Wittmann, C.6
  • 7
    • 0019082670 scopus 로고
    • Permeabilization of animal cells for kinetic studies of intracellular enzymes: In situ behavior of the glycolytic enzymes of erythrocytes
    • J.J. Aragon, J.E. Feliu, R.A. Frenkel, A. Sols, Permeabilization of animal cells for kinetic studies of intracellular enzymes: In situ behavior of the glycolytic enzymes of erythrocytes, Proc. Natl Acad. Sci. USA 77 (1980) 6324-6328.
    • (1980) Proc. Natl Acad. Sci. USA , vol.77 , pp. 6324-6328
    • Aragon, J.J.1    Feliu, J.E.2    Frenkel, R.A.3    Sols, A.4
  • 8
    • 0022552322 scopus 로고
    • Gaining access to the cytosol: The technique and some applications of electropermeabilization
    • D.E. Knight, M.C. Scrutton, Gaining access to the cytosol: The technique and some applications of electropermeabilization, Biochem. J. 234 (1986) 497-506. (Pubitemid 16028370)
    • (1986) Biochemical Journal , vol.234 , Issue.3 , pp. 497-506
    • Knight, D.E.1    Scrutton, M.C.2
  • 9
    • 27744470025 scopus 로고    scopus 로고
    • The use of digitonin-permeabilized mammalian cells for measuring enzyme activities in the course of studies on lipid metabolism
    • DOI 10.1016/j.ab.2005.03.032, PII S0003269705002307
    • M.J. Geelen, The use of digitonin-permeabilized mammalian cells for measuring enzyme activities in the course of studies on lipid metabolism, Anal. Biochem. 347 (2005) 1-9. (Pubitemid 41608561)
    • (2005) Analytical Biochemistry , vol.347 , Issue.1 , pp. 1-9
    • Geelen, M.J.H.1
  • 10
    • 0345561550 scopus 로고    scopus 로고
    • The stimulation of ketogenesis by cannabinoids in cultured astrocytes defines carnitine palmitoyltransferase I as a new ceramide-activated enzyme
    • DOI 10.1046/j.1471-4159.1999.721759.x
    • C. Blazquez, C. Sanchez, A. Daza, I. Galve-Roperh, M. Guzman, The stimulation of ketogenesis by cannabinoids in cultured astrocytes defines carnitine palmitoyltransferase I as a new ceramide-activated enzyme, J. Neurochem. 72 (1999) 1759-1768. (Pubitemid 29140854)
    • (1999) Journal of Neurochemistry , vol.72 , Issue.4 , pp. 1759-1768
    • Blazquez, C.1    Sanchez, C.2    Daza, A.3    Galve-Roperh, I.4    Guzman, M.5
  • 11
    • 0142257956 scopus 로고    scopus 로고
    • Measurement of diacylglycerol acyltransferase activity in isolated hepatocytes
    • DOI 10.1016/j.ab.2003.08.019
    • M.J. Geelen, Measurement of diacylglycerol acyltransferase activity in isolated hepatocytes, Anal. Biochem. 322 (2003) 264-268. (Pubitemid 37330082)
    • (2003) Analytical Biochemistry , vol.322 , Issue.2 , pp. 264-268
    • Geelen, M.J.H.1
  • 12
    • 0021232736 scopus 로고
    • Cytoplasmic free calcium concentration in porcine platelets. Regulation by an intracellular nonmitochondrial calcium pump and increase after thrombin stimulation
    • DOI 10.1016/0304-4165(84)90058-8
    • A.D. Purdon, J.L. Daniel, G.J. Stewart, H. Holmsen, Cytoplasmic free calcium concentration in porcine platelets: Regulation by an intracellular nonmitochondrial calcium pump and increase after thrombin stimulation, Biochim. Biophys. Acta 800 (1984) 178-187. (Pubitemid 14054767)
    • (1984) Biochimica et Biophysica Acta - General Subjects , vol.800 , Issue.2 , pp. 178-187
    • Purdon, A.D.1    Daniel, J.L.2    Stewart, G.J.3    Holmsen, H.4
  • 13
    • 71849115045 scopus 로고    scopus 로고
    • Permeabilization of Corynebacterium glutamicum for NAD(P)H-dependent intracellular enzyme activity measurement
    • Y. Yuan, E. Heinzle, Permeabilization of Corynebacterium glutamicum for NAD(P)H-dependent intracellular enzyme activity measurement, C. R. Chim. 12 (2009) 1154-1162.
    • (2009) C. R. Chim. , vol.12 , pp. 1154-1162
    • Yuan, Y.1    Heinzle, E.2
  • 14
    • 3242877807 scopus 로고    scopus 로고
    • ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST
    • DOI 10.1093/nar/gkh350
    • M. Bhasin, G.P. Raghava, ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST, Nucleic Acids Res. 32 (2004) W414-W419. (Pubitemid 38997368)
    • (2004) Nucleic Acids Research , vol.32 , Issue.WEB SERVER ISS.
    • Bhasin, M.1    Raghava, G.P.S.2
  • 15
    • 34548606295 scopus 로고    scopus 로고
    • Recent progress in protein subcellular location prediction
    • K.C. Chou, H.B. Shen, Recent progress in protein subcellular location prediction, Anal. Biochem. 370 (2007) 1-16.
    • (2007) Anal. Biochem. , vol.370 , pp. 1-16
    • Chou, K.C.1    Shen, H.B.2
  • 16
    • 77953298113 scopus 로고    scopus 로고
    • A new method for predicting the subcellular localization of eukaryotic proteins with both single and multiple sites: Euk-mPLoc 2.0
    • K.C. Chou, H.B. Shen, A new method for predicting the subcellular localization of eukaryotic proteins with both single and multiple sites: Euk-mPLoc 2.0, PLoS One 5 (2010) e9931.
    • (2010) PLoS One , vol.5
    • Chou, K.C.1    Shen, H.B.2
  • 17
    • 17744415832 scopus 로고    scopus 로고
    • Subcellular localization of enzyme activities in chemostat-grown murine myeloma cells
    • N. Vriezen, J.P. van Dijken, Subcellular localization of enzyme activities in chemostat-grown murine myeloma cells, J. Biotechnol. 61 (1998) 43-56.
    • (1998) J. Biotechnol. , vol.61 , pp. 43-56
    • Vriezen, N.1    Van Dijken, J.P.2
  • 19
    • 0021795728 scopus 로고
    • Studies with digitonin-treated rat hepatocytes (nude cells)
    • DOI 10.1002/jcb.240280304
    • J. Katz, P.A. Wals, Studies with digitonin-treated rat hepatocytes (nude cells), J. Cell. Biochem. 28 (1985) 207-228. (Pubitemid 15058716)
    • (1985) Journal of Cellular Biochemistry , vol.28 , Issue.3 , pp. 207-228
    • Katz, J.1    Wals, P.A.2
  • 20
    • 0023276349 scopus 로고
    • Differential permeabilization of membranes by saponin treatment of isolated rat hepatocytes. Release of secretory proteins
    • M. Wassler, I. Jonasson, R. Persson, E. Fries, Differential permeabilization of membranes by saponin treatment of isolated rat hepatocytes: Release of secretory proteins, Biochem. J. 247 (1987) 407-415. (Pubitemid 17153346)
    • (1987) Biochemical Journal , vol.247 , Issue.2 , pp. 407-415
    • Wassler, M.1    Jonasson, I.2    Persson, R.3    Fries, E.4
  • 21
    • 76549225461 scopus 로고
    • A revision of the Schoenheimer-Sperry method for cholesterol determination
    • W.M. Sperry, M. Webb, A revision of the Schoenheimer-Sperry method for cholesterol determination, J. Biol. Chem. 187 (1950) 97-106.
    • (1950) J. Biol. Chem. , vol.187 , pp. 97-106
    • Sperry, W.M.1    Webb, M.2
  • 22
    • 0015209679 scopus 로고
    • Enzymic characterization and lipid composition of rat liver subcellular membranes
    • A. Colbeau, J. Nachbaur, P.M. Vignais, Enzymic characterization and lipid composition of rat liver subcellular membranes, Biochim. Biophys. Acta 249 (1971) 462-492.
    • (1971) Biochim. Biophys. Acta , vol.249 , pp. 462-492
    • Colbeau, A.1    Nachbaur, J.2    Vignais, P.M.3
  • 23
    • 0033551669 scopus 로고    scopus 로고
    • Human acyl-CoA:cholesterol acyltransferase-1 in the endoplasmic reticulum contains seven transmembrane domains
    • S. Lin, D. Cheng, M.S. Liu, J. Chen, T.Y. Chang, Human acyl-CoA:cholesterol acyltransferase-1 in the endoplasmic reticulum contains seven transmembrane domains, J. Biol. Chem. 274 (1999) 23276-23285.
    • (1999) J. Biol. Chem. , vol.274 , pp. 23276-23285
    • Lin, S.1    Cheng, D.2    Liu, M.S.3    Chen, J.4    Chang, T.Y.5
  • 24
    • 0028944503 scopus 로고
    • Analysis of enzyme reactions in situ
    • C.J. Van Noorden, G.N. Jonges, Analysis of enzyme reactions in situ, Histochem. J. 27 (1995) 101-118.
    • (1995) Histochem. J. , vol.27 , pp. 101-118
    • Van Noorden, C.J.1    Jonges, G.N.2
  • 25
    • 0028037571 scopus 로고
    • The orientation of prostaglandin endoperoxide synthases-1 and -2 in the endoplasmic reticulum
    • J.C. Otto, W.L. Smith, The orientation of prostaglandin endoperoxide synthases-1 and -2 in the endoplasmic reticulum, J. Biol. Chem. 269 (1994) 19868-19875. (Pubitemid 24250901)
    • (1994) Journal of Biological Chemistry , vol.269 , Issue.31 , pp. 19868-19875
    • Otto, J.C.1    Smith, W.L.2
  • 26
    • 0023644970 scopus 로고
    • ATP-dependent degradation of 3-hydroxy-3-methylglutaryl coenzyme A reductase in permeabilized cells
    • D.A. Leonard, H.W. Chen, ATP-dependent degradation of 3-hydroxy-3-methylglutaryl coenzyme A reductase in permeabilized cells, J. Biol. Chem. 262 (1987) 7914-7919.
    • (1987) J. Biol. Chem. , vol.262 , pp. 7914-7919
    • Leonard, D.A.1    Chen, H.W.2
  • 27
    • 0021108234 scopus 로고
    • Structural changes of isolated hepatocytes during treatment with digitonin
    • G.A. Cook, V.H. Gattone, A.P. Evan, R.A. Harris, Structural changes of isolated hepatocytes during treatment with digitonin, Biochim. Biophys. Acta 763 (1983) 356-367.
    • (1983) Biochim. Biophys. Acta , vol.763 , pp. 356-367
    • Cook, G.A.1    Gattone, V.H.2    Evan, A.P.3    Harris, R.A.4
  • 29
    • 0029878967 scopus 로고    scopus 로고
    • Interrelation between mitochondrial respiration, substrate supply and redox ratio in perifused permeabilized rat hepatocytes
    • DOI 10.1016/0005-2728(95)00146-8
    • M. Boschmann, W. Halangk, R. Bohnensack, Interrelation between mitochondrial respiration, substrate supply, and redox ratio in perifused permeabilized rat hepatocytes, Biochim. Biophys. Acta 1273 (1996) 223-230. (Pubitemid 26101415)
    • (1996) Biochimica et Biophysica Acta - Bioenergetics , vol.1273 , Issue.3 , pp. 223-230
    • Boschmann, M.1    Halangk, W.2    Bohnensack, R.3
  • 30
    • 0024784583 scopus 로고
    • Characterization of mitochondrial functions in digitonin-permeabilized rat liver cells
    • M. Boschmann, W. Halangk, R. Bohnensack, Characterization of mitochondrial functions in digitonin-permeabilized rat liver cells, Biomed. Biochim. Acta 48 (1989) 645-652. (Pubitemid 20047018)
    • (1989) Biomedica Biochimica Acta , vol.48 , Issue.9 , pp. 645-652
    • Boschmann, M.1    Halangk, W.2    Bohnensack, R.3
  • 31
    • 0019325127 scopus 로고
    • Validity of the digitonin method for metabolite compartmentation in isolated hepatocytes
    • D.G. Brocks, E.A. Siess, O.H. Wieland, Validity of the digitonin method for metabolite compartmentation in isolated hepatocytes, Biochem. J. 188 (1980) 207-212.
    • (1980) Biochem. J. , vol.188 , pp. 207-212
    • Brocks, D.G.1    Siess, E.A.2    Wieland, O.H.3
  • 32
    • 67349222520 scopus 로고    scopus 로고
    • An integrated approach to improved toxicity prediction for the safety assessment during preclinical drug development using Hep G2 cells
    • F. Noor, J. Niklas, U. Muller-Vieira, E. Heinzle, An integrated approach to improved toxicity prediction for the safety assessment during preclinical drug development using Hep G2 cells, Toxicol. Appl. Pharmacol. 237 (2009) 221-231.
    • (2009) Toxicol. Appl. Pharmacol. , vol.237 , pp. 221-231
    • Noor, F.1    Niklas, J.2    Muller-Vieira, U.3    Heinzle, E.4
  • 33
    • 70349767923 scopus 로고    scopus 로고
    • Effects of drugs in subtoxic concentrations on the metabolic fluxes in human hepatoma cell line Hep G2
    • J. Niklas, F. Noor, E. Heinzle, Effects of drugs in subtoxic concentrations on the metabolic fluxes in human hepatoma cell line Hep G2, Toxicol. Appl. Pharmacol. 240 (2009) 327-336.
    • (2009) Toxicol. Appl. Pharmacol. , vol.240 , pp. 327-336
    • Niklas, J.1    Noor, F.2    Heinzle, E.3


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