Standardized positive controls for detection of norovirus by reverse transcription PCR

Virology Journal

Volumn 8, Issue , 2011, Pages

  Lee, Sung Geun ^a   Lee, Soe Hyun ^a   Park, Seung Won ^b   Suh, Chang Il ^a   Jheong, Weon Hwa ^c   Oh, Sehwan ^a   Paik, Soon Young ^a  

^a The Catholic University of Korea   (South Korea)

^b National Institute of Animal Science   (South Korea)

^c National Institute of Environmental Research   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

GROUND WATER;

ARTICLE; CONTROLLED STUDY; DIAGNOSTIC ACCURACY; DIAGNOSTIC TEST ACCURACY STUDY; FECES; GENE INSERTION; HEPATITIS A VIRUS; HUMAN; HUMAN ROTAVIRUS; NONHUMAN; NOROVIRUS; NUCLEOTIDE SEQUENCE; P2A GENE; PLASMID; POSITIVE CONTROL; RELIABILITY; REPRODUCIBILITY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA TRANSCRIPTION; STANDARD; VIRUS CAPSID; VIRUS DETECTION; VIRUS GENE; VP1 GENE; VP7 GENE; CALICIVIRUS INFECTION; GASTROENTERITIS; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; MOLECULAR DIAGNOSIS; VIROLOGY;

HEPATITIS A VIRUS; HUMAN ROTAVIRUS A; MIRIDAE; NOROVIRUS;

CALICIVIRIDAE INFECTIONS; ENVIRONMENTAL MICROBIOLOGY; GASTROENTERITIS; HUMANS; MOLECULAR DIAGNOSTIC TECHNIQUES; NOROVIRUS; REFERENCE STANDARDS; REPRODUCIBILITY OF RESULTS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; VIROLOGY;

EID: 80052616390     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-8-260     Document Type: Article

References (20)

1. Acute infectious nonbacterial gastro-enteritis: etiology and pathogenesis. NR Blacklow R Dolin DS Fedson H DuPont RS Northrup RB Hornick RM Chanock, Ann Intern Med 1972 76 993 1008 4554885
2. Epidemiologic and molecular trends of "Norwalk-like viruses" associated with outbreaks of gastroenteritis in the United States. R Fankhauser SS Monroe JS Noel CD Humohrey JS Bresee UD Parashar T A (Pubitemid 34666907)
3. Diagnosis of noncultivatable gastroenteritis viruses, the human caliciviruses. RL Atmar MK Estes, Clin Microbiol Rev 2001 14 15 37 10.1128/CMR.14.1.15-37.2001 11148001 (Pubitemid 32096205)
4. Porcine Norivirus Related to Human Noroviruses. QH Wang MG Han S Cheetham M Souza JA Funk L J, Emerg Infect Dis 2005 11 12 1874 81 16485473 (Pubitemid 43356083)
5. Coexistence of multiple genotypes, including newly identified genotypes, in outbreaks of gastroenteritis due to norovirus in Japan. T Kageyama M Shinohara K Uchida S Fukushi FB Hoshino S Kojima R Takai T Oka N Takeda K Katayama, J Clin Microbiol 2004 42 2988 95 10.1128/JCM.42.7.2988-2995.2004 15243049 (Pubitemid 38938047)
6. Molecular detection and epidemiology of Sapporo-like viruses. J Vinje H Deijl R van der Heide D Lewis KO Hedlund L Svensson MP Koopmans, J Clin Microbiol 2000 38 530 536 10655340 (Pubitemid 30082636)
7. Noroviruses: a comprehensive review. MM Patel AJ Hall J Vinjé UD Parashar, J Clin Virol 2009 44 1 8 10.1016/j.jcv.2008.10.009 19084472
8. Genetic polymorphism across regions of the three open reading frames of Norwalk-like viruses. J Vinje J Green DC Lewis CI Gallimore DW Brown MP Koopmans, Arch Virol 2000 145 223 241 10.1007/s007050050020 10752550 (Pubitemid 30124153)
9. Current recommendations for positive controls in RT-PCR assays. T Lion, Leukemia 2001 15 1033 7 10.1038/sj.leu.2402133 11455970 (Pubitemid 32717271)
10. Gastroenteritis due to Norwalk virus: an outbreak associated with a municipal water system. JE Kaplan RA Goodman LB Schonberger EC Lippy GW Gary, J Infect Dis 1982 146 190 197 10.1093/infdis/146.2.190 6286788 (Pubitemid 12009783)
11. An outbreak of acute nonbacterial gastroenteritis in a nursing home: demonstration of person-to-person transmission by temporal clustering of cases. JE Kaplan LB Schonberger G Varano N Jackman J Bied GW Gary, Am J Epidemiol 1982 116 940 948 6293306 (Pubitemid 13209567)
12. Epidemiology of Norwalk gastroen-teritis and the role of Norwalk virus in outbreaks of acute nonbacterial gastroenteritis. JE Kaplan GW Gary RC Baron N Singh LB Schonberger R Feldman HB Greenberg, Ann Intern Med 1982 96 756 761 6283977 (Pubitemid 12029344)
13. Norovirus gastroenteritis. RI Glass UD Parashar MK Estes, N Engl J Med 2009 361 1776 1785 10.1056/NEJMra0804575 19864676
14. Norovirus disease: changing epidemiology and host susceptibility factors. AM Hutson RL Atmar MK Estes, Trends Microbiol 2004 12 279 287 10.1016/j.tim.2004.04.005 15165606 (Pubitemid 38686376)
15. Molecular epidemiological profile of rotavirus in South Korea, July 2002 through June 2003:emergence of G4P[6] and G9P[8] strains. JO Kang P Kilgore JS Kim B Nyambat J Kim HS Suh YM Yoon SK Jang C Chang S Choi MN Kim J Gentsch J Bresee R Glass, J Infect Dis 2005 192 Suppl 1 57 63 16088806
16. Detection of Norwalk virus and hepatitis A virus in shellfish tissues with the PCR. RL Atmar FH Neill JL Romalde F Le Guyader CM Woodley TG Metcalf MK Estes, Appl Environ Microbiol 1995 61 3014 3018 7487032
17. Use of heat release and an internal RNA standard control in reverse transcription-PCR detection of Norwalk virus from stool samples. KJ Schwab MK Schwab FH Neill RL Atmar, J Clin Microbiol 1997 35 511 514 9003630 (Pubitemid 27043937)
18. Molecular Epidemiology of Norovirus Infections in Children withAcute Gastroenteritis in South Korea in November 2005 through November 2006. JS Yoon SG Lee SK Hong SA Lee WH Jheong SS Oh MH Oh GP Ko CH Lee SY Paik, J Clin Microbiol 2008 46 1474 1477 10.1128/JCM.02282-07 18272704
19. Detection of Enteroviruses and Mammalian Reoviruses by RT-PCR and Integrated Cell Culture-PCR in CPE-positive Surface Water Samples. HJ Kim HA Ko SH Kim, J Bacteriol Virol 2004 34 331 338 (Pubitemid 41224624)
20. Genetic Analysis of Hepatitis A Virus Isolated from Korea. KY Lee SJ Jeong HS Seong KT Kim YS Hwang GY Kim SH Lee, J Bacteriol Virol 2009 39 165 171 10.4167/jbv.2009.39.3.165