Primary processes and structure of the photosystem II reaction center: A photon echo study

Journal of Physical Chemistry B

Volumn 104, Issue 48, 2000, Pages 11563-11578

  Prokhorenko, Valentin I ^a   Holzwarth, Alfred R ^a  

^a MAX PLANCK INSTITUTE FOR CHEMICAL ENERGY CONVERSION   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CHLOROPHYLL; EXCITONS; HAMILTONIANS; LOW TEMPERATURE PROPERTIES; PHOTONS; PHOTOSYNTHESIS; SPECTROSCOPIC ANALYSIS;

PHOTOSYSTEM II REACTION CENTER; PRIMARY CHARGE SEPARATION PROCESS; TWO PULSE PHOTON ECHO TECHNIQUE;

PROTEINS;

EID: 0034497568     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp002323n     Document Type: Article

References (74)

1. Kobayashi, M.; Maeda, H.; Watanabe, T.; Nakane, H.; Satoh, K. FEBS Lett. 1990,260, 138.
2. Eijckelhoff, C.; Dekker, J. P. Biochim. Biophys. Acta 1995,1231, 21.
3. Deisenhofer, J.; Epp, O.; Miki, K.; Huber, R.; Michel, H. Nature 1985, 318, 618.
4. Takahashi, Y.; Hansson, O.; Mathis, P.; Satoh, K. Biochim. Biophys. Acta 1987, 893, 49.
5. Durrant, J. R.; Giorgi, L. B.; Barber, J.; Klug, D. R.; Porter, G. Biochim. Biophys. Acta 1990, 1017, 167.
6. Groot, M.-L.; Peterman, E. J.; van Kan, P. J. M.; van Stokkum, I. H. M.; Dekker, J. P.; van Grondelle, R. Biophys. J. 1994, 67, 318.
7. Nanba, O.; Satoh, K. Proc. Ntal. Acad. Sci. U.S.A. 1987, 84, 109.
8. Jankowiak, R.; Tang, D.; Small, G. J.; Scibert, M. J. Phys. Chem. 1989, 93, 1649.
9. Tang, D.; Jankowiak, R.; Scibert, M.; Small, G. J. Photosynlh. Res. 1991,27, 19.
10. Tang, D.; Jankowiak, R.; Scibert, M.; Yocum, C. F.; Small, G. J. J. Phys. Chem. 1990, 94, 6519.
11. Wasielewski, M. R.; Johnson, D. G.; Govindjee; Preston, C.; Scibert, M. Photosynlh. Res. 1989, 22, 89.
12. Wasielewski, M. R.; Johnson, D. G.; Scibert, M.; Govindjee Proc. Ata/. Acad. Sci. U.S.A. 1989, 86, 524.
13. Greenfield, S. R.; Scibert, M.; Govindjee; Wasielewski, M. R. J. Phys. Chem. B 1997, 101, 2251.
14. Greenfield, S. R.; Scibert, M.; Wasielewski, M. R. J. Phys. Cliem. B 1999, 103, 8364.
15. Müller, M. G.; Hucke, M.; Reus, M.; Holzwarth, A. R. J. Phys. Chem. 1996, 100, 9537.
16. Roelofs, T. A.; Gilbert, M.; Shuvalov, V. A.; Holzwarth, A. R. Biochim. Biophys. Acta 1991, 1060, 237.
17. Groot, M.-L.; van Mourik, F.; Eijckelhoff, C.; van Stokkum, I. H. M.; Dekker: J. R; van Grondelle, R. Proc. Nall. Acad. Sci. U.S.A. 1997, 94, 4389.
18. Durrant, J. R.; Hastings, G.; Hong, Q.; Barber, J.; Porter, G.; Klug, D. R. Chem. Phys. Lett. 1992, 188, 54.
19. Merry, S. A. P.; Kumazaki, S.; Tachibana, Y.; Joseph, D. M.; Porter, G.; Yoshihara, K.; Barber, J.; Durrant, J. R.; Klug, D. R. J. Phys. Chem. 1996. 700, 10469.
20. Holzwarth, A. R.; Müller, M. G.; Gatzen, G.; Hucke, M.; Griebenow, K. J. Lwninesc. 1994, 60&61, 497.
21. Leegwater, J. A.; Durrant, J. R.; Klug, D. R. J. Phys. Chem. B 1997. 101, 7205.
22. Durrant, J. R.; Klug, D. R.; Kwa, S. L.; van Grondelle, R.; Porter, G.'; Dekker, J. P. Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 4798.
23. Groot, M. L.; Dekker: J. P.; van Grondelle, R.; den Hartog, F. T. H.; Völker, S. J. Phys. Chem. 1996, 700, 11488.
24. Mukamel, S. Principles of nonlinear optical spectroscopy; Oxford University Press: New York, 1995.
25. 2* is satisfied.
26. Vink, K. J.; De Boer, S.; Plijter, J. J.; Hoff, A. J.; Wiersma, D. A. Chem. Phys. Lett. 1987, 142, 433.
27. Schellenberg, P.; Louwe, R. J. W.; van Gorkom, H. J.; Aartsma, T. J. In Photosynthesis: from Light to Biosphere; Mathis, P., Ed.; Kluwer Academic Publishers: Dordrecht, 1995; p 755.
28. Svensson, B.; Etchebest, C.; Tuffery, P.; van Kan, P.; Smith, J.; Styring, S. Biochemistry 1996, 35, 14486.
29. Rhee, K.-H.; Morris, E. P.; Barber, J.; Kuhlbrandt, W. Nature 1998, 396, 283.
30. Barber, J.; Kühlbrandt, W. Citrr. Opinion Struct. Biol. 1999, 9, 469.
31. Davydov, A. S. T/ieory of molecular excitons; Plenum Press: New York, 1971.
32. Kwa, S. L. S.; Eijckelhoff, C.; van Grondelle, R.; Dekker, J. P. J. Phys. Chem. 1994, 98, 7702.
33. Peterman, E. J. G.; Van Amerongen, H.; van Grondelle, R.; Dekker, J. P. Proc. Nail. Acad. Sci. U.S.A. 1998, 95, 6128.
34. Tetenkin, V. L.; Gulyaev, B. A.; Scibert, M.; Rubin, A. B. FEES Lett. 1989, 250, 459.
35. Braun, P.; Greenberg, B. M.; Scherz, A. Biochemistry 1990, 29, 10376.
36. van Kan, P. J. M.; Otte, S. C. M.; Kleinherenbrink, F. A. M.; Nieveen, M. C.; Aartsma, T. J.; van Gorkom, H. J. Biochim. Biophys. Acta 1990, 7020, 146.
37. Chang, H.-C.; Jankowiak, R.; Yocum, C. F.; Picorel, R.; Alfonso, M.; Scibert, M.; Small, G. J. J. Phys. Chem. 1994, 98. 7717.
38. Redfield, A. G. In Advances in Magnetic Resonance, Vol. I; Waugh, J. S., Ed.; Academic Press: New York, 1965; p 1.
39. Pollard, W. T.; Friesner, R. A. J. Chem. Phys. 1994, 700, 5054.
40. Henceforth index "s" for denoting of the reduced density matrix is omitted.
41. Blum, K. Density matrix theory and applications; Plenum Press: New York, 1981.
42. Maradudin, A. A. In Solid State Phys. 18; Scitz, F., Turnbull, D., Eds.; Academic Press: New York, 1966; p 392.
43. 2* that is more significant.
44. Loudon, R. The quantum theory of light; Wiley: New York, 1983.
45. Personov, R. I. In Spectroscopy and Excitation Dynamics of Condensed Mol. Systems; Agranovich, V. M., Hochstrasser, R. M., Eds.; Publishing Company: Amsterdam, 1983; p 555.
46. Kukushkin, L. S. Fiz. Tverd. Tela 1963, 5, 2170.
47. In this paper we have not specified a model for the electron-bath coupling and have not used phonons, however we will hold a generally accepted terminology, which historically originates from impurity center physics.
48. Kukushkin, L. S. Fiz. Tverd. Tela 1965, 7, 54.
49. van Leeuwen, P. J.; Nieveen, M. C.; van de Meent, E. J.; Dekker, J. P.; van Gorkom, H. J. Photosynth. Res. 1991, 28, 149.
50. Konermann, L.; Holzwarth, A. R. Biochemistry 1996, 35, 829.
51. Sala, K. L.; Kenney-Wallace, G. A.; Hall, G. E. 1EEEJ. Quantum Electron. 1980, 76, 990.
52. Prokhorenko, V. I.; Steensgaard, D. B.; Holzwarth, A. R. Biophys. J. 2000, 79, 2105.
53. Prokhorenko, V. I.; Holzwarth, A. R. Presented at the International Workshop on Ligth-Harvesting Systems, Tata, Hungary, 1998 (unpublished).
54. Levenson, M. D. Introduction to nonlinear laser spectroscopy; Academic Press: New York, 1982.
55. 6.
56. Agranovich, V. M.; Galanin, M. D. In Electronic Excitation Energy Transfer in Condens. Matter, Agranovich, V. M., Galanin, M. D., Eds.; North-Holland Publishing Company: Amsterdam, 1982; p 81.
57. Svensson, B.; van Kan, P. J. M.; Styring, S. In Photosynthesis: From Light to Biosphere; Mathis, P., Ed.; Kluwer Academic Publishers: Dordecht, The Netherlands, 1995; p 425.
58. Pearlstein, R. M. In Chlorophylls; Scheer, H., Ed.; CRC Press: New York, 1991; p 1047.
59. Here we assume that this phonon profile corresponds to the one for a single pigment, which is not necessarily true for a strongly coupled system of pigments.
60. Fidder, H.; Knoester, J.; Wiersma, D. A. J. Chem. Phys. 1991, 95, 7880.
61. Leeson, D. T.; Berg, O.; Wiersma, D. A. J. Phys. Chem. 1994, 98, 3913.
62. Visser, H. M.; Groot, M.-L.; van Mourik, F.; van Stokkum, I. H. M.; Dekker: J. P.; van Grondelle, R. J. Phys. Chem. 1995, 99, 15304.
63. Renger, T.; May, V. J. Phys. Chem. A 1998, 702, 4381.
64. Kühn, O.; Renger, T.; May, V.; Voigt, J.; Pullerits, T.; Sundström, V. Trends Pholochem. Photobiol. 1999, 4, 213.
65. Hesselink, W. H.; Wiersma, D. A. In Spectroscopy and Excitation Dynamics of Condensed Molecular Systems; Agranovich, V. M., Hochstrasser, R. M., Eds.; North-Holland Publishing Company: Amsterdam, 1983; p 249.
66. Cho, M.; Yu, J.-Y.; Joo, T.; Nagasawa, Y.; Passino, S. A.; Reming, G. R. J. Phys. Chem. 1996, 700, 11944.
67. Nagasawa, Y.; Yu, J.-Y.; Cho, M.; Fleming, G. R. Faraday Discuss. 1997, 108, 23.
68. Passino, S. A.; Naaasawa, Y.; Joo, T.; Reming, G. R. J. Phys. Chem. A 1997, 707, 725.
69. Mercer, I. P.; Gould, I. R.; Klug, D. R. Faraday Discuss. 1997, 108, 51.
70. Mercer, I. P.; Gould, I. R.; Klug, D. R. J. Phys. Chem. B 1999, 705, 7720.
71. van Brederode, M. E.; Jones, M. R.; van Mourik, F.; van Stokkum, I. H. M.; van Grondelle, R. Biochemistry 1997, 36, 6855.
72. Prokhorenko, V. I.; Holzwarth, A. R. In Photosynthesis: Mechanism and Effects/XL Int. Congr. Photosynthesis Budapest 1998; Garab, G., Ed.; Kluwer Academic Publishers: Dordrecht, 1998; p 1033.
73. Fidder, H.; Wiersma, D. A. J. Phys. Chem. 1993, 97, 11603.
74. Miyatake, T.; Tamiaki, H.; Holzwarth, A. R.; Schaffner, K. Helv. Chim. Acta 1999, 82, 797.