Analysis of escherichia coli isolated from patients affected by Crohn's Disease

Current Microbiology

Volumn 63, Issue 2, 2011, Pages 131-137

  Raso, Tiziana ^a   Crivellaro, Sabrina ^a   Chirillo, Maria Gabriella ^b   Pais, Paolo ^b   Gaia, Ezio ^b   Savoia, Dianella ^a  

^a UNIVERSITY OF TURIN   (Italy)

^b SAN LUIGI GONZAGA HOSPITAL   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM ISOLATE; BACTERIUM ISOLATION; BFPB GENE; CELL STRAIN CACO 2; CELL STRAIN U937; CHUA GENE; CONTROLLED STUDY; CROHN DISEASE; ESCHERICHIA COLI; ESCV GENE; FEMALE; GENOTYPE; HUMAN; HUMAN TISSUE; INTESTINE BIOPSY; INVASIVE SPECIES; MALE; NONHUMAN; PATHOGENESIS; PHAGOCYTOSIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; SPECIES COMPARISON; STRAIN DIFFERENCE; TSPE4.C2 GENE; ULCERATIVE COLITIS; YJAA GENE;

ADOLESCENT; ADULT; BACTERIAL ADHESION; BIOPSY; CELL LINE; CLUSTER ANALYSIS; CROHN DISEASE; ELECTROPHORESIS, GEL, PULSED-FIELD; EPITHELIAL CELLS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; FEMALE; GENOTYPE; HUMANS; INTESTINAL MUCOSA; MALE; MIDDLE AGED; MOLECULAR TYPING; MONOCYTES; YOUNG ADULT;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 80052549284     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-011-9947-8     Document Type: Article

References (39)

1. Abubakar I, Myhill D, Aliyu SH, Hunter PR (2008) Detection of Mycobacterium avium subsp. paratuberculosis from patients with Crohn's disease using nucleic acid-based techniques: a systematic review and meta-analysis. Inflam Bowel Dis 14:401-410 (Pubitemid 351441331)
2. Barnich N, Darfeuille-Michaud A (2007) Role of bacteria in the etiopathogenesis of inflammatory bowel disease. World J Gastroenterol 13:5571-5576 (Pubitemid 350031476)
3. Baumgart DC, Carding SR (2007) Inflammatory bowel disease: cause and immunobiology. Lancet 369:1627-1640 (Pubitemid 46722636)
4. Baumgart M, Dogan B, Rishniw M, Weitzman G, Bosworth B, Yantiss R, Orsi RH, Wiedemann M et al (2007) Culture independent analysis of ileal mucosa reveals a selective increase in invasive Escherichia coli of novel phylogeny relative to depletion of Clostridiales in Crohn's disease involving the ileum. ISME J 1:403-418 (Pubitemid 47373247)
5. Boudeau J, Glasser A, Masseret E, Joly B, Darfeuille-Michaud A (1999) Invasive ability of an Escherichia coli strain isolated from the ileal mucosa of a patient with Crohn's disease. Infect Immun 67:4499-4509 (Pubitemid 29400425)
6. Bulois P, Desreumaux P, Neut C, Darfeuille-Michaud A, Cortot A, Colombel JF (1999) Infectious agents and Crohn's disease. Clin Microbiol Infect 5:601-604 (Pubitemid 29507413)
7. CDCPulseNetUSA (2004) One-day (24-28 h) standardized laboratory protocol for molecular subtyping of Escherichia coli O157:H7, non-typhoidal Salmonella serotypes, and Shigella sonnei by pulsed field gel electrophoresis (PFGE). PulseNet PFGE Manual 5.1-5.3:1-13
8. Clermont O, Bonacorsi S, Bingen E (2000) Rapid and simple determination of the Escherichia coli phylogenetic group. Appl Environ Microbiol 66:4555-4558
9. Darfeuille-Michaud A, Neut C, Barnich N, Lederman E, Di Martino P, Desremaux P, Gambiez L, Joly B, Cortot A, Colombel JF (1998) Presence of adherent Escherichia coli strains in ileal mucosa of patients with Crohn's disease. Gastroenterology 115:1405-1413 (Pubitemid 28545991)
10. Darfeuille-Michaud A, Boudeau J, Bulois P, Neut C, Glasser A-L, Barnich N, Bringer MA, Swidsinski A, Beaugerie L, Colombel JF (2004) High prevalence of adherent-invasive Escherichia coli associated with ileal mucosa in Crohn's disease. Gastroenterology 127:412-421 (Pubitemid 39091889)
11. De Hertogh G, Aerssens J, Geboes KP, Geboes K (2008) Evidence for the involvement of infectious agents in the pathogenesis of Crohn's disease. World J Gastroenterol 14: 845-852 (Pubitemid 351325023)
12. Dice L (1945) Measures of the amount of ecological association between species. Ecology (New York) 26:297-302
13. El-Zaatari FA, Naser SA, Hulten K, Burch P, Graham DY (1999) Characterization of Mycobacterium paratuberculosis p36 antigen and its seroreactivities in Crohn's disease. Curr Microbiol 39:115-119 (Pubitemid 29344671)
14. Fellermann K, Wehkamp J, Herrlinger KR, Stange EF (2003) Crohn's disease: a defensing deficiency syndrome. Eur J Gastroenterol Hepatol 15:627-634 (Pubitemid 36688226)
15. Gaia E, Pais P, Salacone P, Morello C (2008) Preliminary results obtained with cefoperazone plus corticosteroids in the treatment of active Crohn's disease. Inflamm Bowel Dis 15:1123-1124
16. Hanauer SB (2006) Inflammatory bowel disease: epidemiology, pathogenesis, and therapeutic opportunities. Inflam Bowel Dis 12(Suppl 1):S3-S9 (Pubitemid 43068428)
17. Kotlowski R, Bernstein CN, Sepehri S, Krause DO (2007) High prevalence of Escherichia coli belonging to the B2 ? D phylogenetic group in inflammatory bowel disease. Gut 56:669-675 (Pubitemid 46662933)
18. La Ferla K, Seegert D, Schreiber S (2004) Activation of NFkappa B in intestinal epithelial cells by E. coli strains isolated from the colonic mucosa of IBD patients. Int J Colorectal Dis 19:334-342 (Pubitemid 38868299)
19. Lapaquette P, Glasser AL, Huett A, Xavier RJ, Darfeuille-Michaud A (2010) Crohn's disease-associated adherent-invasive E. coli are selectively favoured by impaired autophagy to replicate intracellularly. Cell Microbiol 12:99-113
20. Loftus EV Jr (2004) Clinical epidemiology of inflammatory bowel disease: incidence, prevalence, and environmental influences. Gastroenterology 126:1504-1517 (Pubitemid 38649869)
21. Martin HM, Campbell BJ, Hart CA, Mpofu C, Nayar M, Singh R, Englyst H, Williams HF, Rhodes JM (2004) Enhanced Escherichia coli adherence and invasion in Crohn's disease and colon cancer. Gastroenterology 127:80-93 (Pubitemid 38962277)
22. Martinez-Medina M, Aldeguer X, Lopez-Siles M, Gonzalez-Huix F, Lopez-Oliu C, Dahbi G, Blanco JE, Blanco J, Garcia-Gil LJ, Darfeuille-Michaud A (2009) Molecular diversity of Escherichia coli in the human gut: new ecological evidence supporting the role of adherent-invasive E. coli (AIEC) in Crohn's disease. Inflam Bowel Dis 15:872-882
23. Martinez-Medina M, Mora A, Blanco M, Lopez C, Alonso MP, Bonacorsi S, Nicolas-Chanoine MH, Darfeuille-Michaud A, Garcia-Gil J, Blanco J (2009) Similarity and divergence among adherent-invasive E. coli (AIEC) and extraintestinal pathogenic E. coli (ExPEC). J Clin Microbiol 47:3968-3979
24. Moussata D, Goetz M, Gloeckner A, Kerner M, Campbell B, Hoffman A, Biesterfeld S, Flourie B, Saurin J-C, Galle PR, Neurath MF, Watson AJM, Kiesslich R (2011) Confocal laser endomicroscopy is a new imaging modality for recognition of intramucosal bacteria in onflammatory bowel disease in vivo. Gut 60:26-33
25. Muller D, Hagedorn P, Brast S, Heusipp G, Bielaszewska M, Friedrich A, Karch H, SchmidtMA(2006) Rapid identification and differentiation of clinical isolates of enteropathogenic Escherichia coli (EPEC), and Shiga toxin-producing Escherichia coli by onestep multiplex PCR method. J Clin Microbiol 44:2626-2629 (Pubitemid 44092446)
26. Naser SA, Ghobrial G, Romero C, Valentine JF (2004) Culture of Mycobacterium avium subsp. paratuberculosis from the blood of patients with Crohn's disease. Lancet 364:1039-1044 (Pubitemid 39248662)
27. Prantera C, Scribano ML (2009) Antibiotics and probiotics in inflammatory bowel disease: why, when, and how. Curr Opin Gastroenterol 25:329-333
28. Rachmilewitz D (1989) Coated mesalazine (5-aminosalicylic acid) versus sulphasalazine in the treatment of active ulcerative colitis: a randomized trial. BMJ 298:82-86 (Pubitemid 19032930)
29. Sartor BR (2004) Therapeutic manipulation of the enteric microflora in inflammatory bowel disease: antibiotics, probiotics, and prebiotics. Gastroenterology 126:1620-1633
30. Sartor RB (2008) Microbial influences in inflammatory bowel disease. Gastroenterology 134:577-594 (Pubitemid 351173057)
31. Sasaki M, Sitaraman SV, Babbin BA (2007) Invasive Escherichia coli are a feature of Crohn's disease. Lab Investig 87:1042-1154
32. Sauer A, Moraru CI (2009) Inactivation of Escherichia coli ATCC 25922 and Escherichia coli O157:H7 in apple juice and apple cider, using pulsed light treatment. J Food Prot 72:937-944
33. Sepehri S, Khafipour E, Bernstein CN, Coombes BK, Pilar AV, Karmali M, Ziebell K, Krause DO (2010) Characterization of Escherichia coli isolated from gut biopsies of newly diagnosed patients with inflammatory bowel disease. Inflamm Bowel Dis 11:22-33. doi:10.1002/ibd.21509
34. Strober W, Fuss I, Mannon P (2008) The fundamental basis of inflammatory bowel disease. J Clin Invest 117:514-521
35. Tennant S, Tauschek M, Azzopardi K, Bigham A, Bennett-Wood V, Hartland EL, Whittam TS, Robins-Browne RM (2009) Characterization of atypical enteropathogenic E. coli strains of clinical origin. BMC Microbiol 9:117-128
36. Tenover FC, Arbeit RD, Goering RV, Mickelsen P, Murray B, Persing DH, Swaminathan B (1995) Interpreting chromosomal DNA restriction patterns produced by pulse-field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 33:2233-2239
37. Willing B, Halfvarson J, Dicksved J, Rosenquist M, Jarnerot G, Engstrand L, Tysk C, Jansson JK (2009) Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohn's disease. Inflamm Bowel Dis 15:653-660
38. Wine E, Ossa JC, Gray-Owen SD, Sherman PM (2009) Adherentinvasive Escherichia coli, strain LF82 disrupts apical junctional complexes in polarized epithelia. BMC Microbiol 9:180-191
39. Wine E, Ossa JC, Gray-Owen SD, Sherman PM (2010) Adherentinvasive Escherichia coli target the epithelium barrier. Gut Microbes 1:80-84