Hypocrea peltata: A mycological Dr Jekyll and Mr Hyde?

Mycologia

Volumn 103, Issue 3, 2011, Pages 616-630

  Samuels, Gary J ^a   Ismaiel, Adnan ^a  

^a U S DEPARTMENT OF AGRICULTURE   (United States)

Author keywords

Hypocreaceae; Hypocreales; Medical mycology; Peptaibols; Shiitake; Systematics

Indexed keywords

FUNGAL DISEASE; LITERATURE REVIEW; POLYMERASE CHAIN REACTION; TAXONOMY;

HYPOCREA; HYPOCREACEAE; HYPOCREALES; LENTINULA EDODES; PEZIZOMYCOTINA; TRICHODERMA;

FUNGAL DNA; RIBOSOME DNA; RNA POLYMERASE II; SPACER DNA;

ARTICLE; CLASSIFICATION; CYTOLOGY; DNA SEQUENCE; FUNGUS SPORE; GENETICS; HUMAN; HYPOCREA; LUNG; LUNG FIBROSIS; MICROBIOLOGY; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; POLYMERASE CHAIN REACTION;

BASE SEQUENCE; DNA, FUNGAL; DNA, INTERGENIC; DNA, RIBOSOMAL; HUMANS; HYPOCREA; LUNG; PHYLOGENY; POLYMERASE CHAIN REACTION; PULMONARY FIBROSIS; RNA POLYMERASE II; SEQUENCE ANALYSIS, DNA; SPORES, FUNGAL;

EID: 80052360678     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.3852/10-227     Document Type: Article

References (45)

1. Bissett J. 1991. A revision of the genus Trichoderma III. Section Pachybasium. Can J Bot 69:2372-2417.
2. Canham SC. 1969. Taxonomy and morphology of Hypocrea citrina. Mycologia 51:315-331.
3. Chamberlain HL, Rossman AY, Stewart ES, Ulvinen T, Samuels GJ. 2004. The stipitate species of Hypocrea (Hypocreales, Hypocreaceae) including Podostroma. Karstenia 44:1-24.
4. Degenkolb T, Dieckmann R, Nielsen KF, Gräfenhan T, Theis C, Zafari D, Chaverri P, Ismaiel A, Brückner H, Döhren H von, Thrane U, Petrini O, Samuels GJ. 2008. The Trichoderma brevicompactum clade: a separate lineage with new species, new peptaibiotics, and mycotoxins. Mycological Progress 7:177-209.
5. Doi Y. 1971. Some species of the genus Hypocrea. Bull Nat Sci Mus Tokyo 14:387-400.
6. Doi Y. 1975. Revision of the Hypocreales with cultural observations VIII. Hypocrea peltata (Jungh.) Berk. and its allies. Bull Natl Sci Mus Tokyo 1:121-134.
7. Doi Y. 1979. Revision of the Hypocreales with cultural observations XII. Additional note on Hypocrea peltata (Jungh.) Berk. and its allied species. Bull Natl Sci Mus, Ser B (Bot) 5:37-49.
8. Druzhinina IS, Komoń-Zelazowska M, Kredics L, Halvani L, Antal Z, Belayneh T, Kubicek CP. 2008. Alternative reproductive strategies of Hypocrea orientalis and genetically close but clonal Trichoderma longibrachiatum, both capable of causing invasive mycoses of humans. Microbiology 154:3447-3459.
9. Druzhinina IS, LaFe K, Willinger B, Komoń-Zelazowska M, Ammirati J, Kubicek CP, Rogers JD. 2007. An unknown Hypocreaceae species isolated from human lung tissue of a patient with non-fatal pulmonary fibrosis. Clin Microbiol Newsl 29:180-184.
10. Fujita T, Takaishi Y, Moritoki H, Ogawa T, Tokimoto K. 1984. Fungal metabolites I. Isolation and biological activities of hypelcins A and B (growth inhibitors against Lentinus edodes) from Hypocrea peltata. Chem Pharm Bull 32:1822-1828.
11. Fujita T, Takaishi Y, Shiromoto T. 1979. New peptide antibiotic, hypelcin A, from Hypocrea peltata. J Chem Soc, Chem Commun 1979:413-414.
12. Hashioka Y. 1973. Scanning electron microscopy on the mycoparasites, Trichoderma, Gliocladium and Acremonium. Rep Tottori Mycol Inst Japan 10:473-484.
13. Hillis DM, Bull JJ. 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42:182-192.
14. Huelsenbeck JP, Ronquist F. 2001. Mr Bayes: Bayesian inference of phylogeny. Bioinformatics 17:754-755.
15. Jaklitsch WM. 2009. European species of Hypocrea I. The green-spored species. Stud Mycol 63:1-91.
16. Jaklitsch WM., Gruber S, Voglmayr H. 2008. Hypocrea seppoi, a new stipitate species from Finland. Karstenia 48:1-88.
17. Jaklitsch WM., Samuels GJ, Dodd S, Lu B-S, Druzhinina I. 2006. Hypocrea rufa/Trichoderma viride: a reassessment and description of five closely related species with and without warted conidia. Stud Mycol 56:135-177.
18. Kirk PM, Canon PF, Minter DW, Stalpers JA. 2008. Ainsworth and Bisby's Dictionary of the Fungi. 10th ed. Wallingford, UK: CAB International. 771 p.
19. Koide N, Asami K, Fujita T. 1997. Ion-channels formed by hypelcins, antibiotic peptides, in planar bilayer lipid membranes. Biochim Biophys Acta 1326:47-53.
20. Komatsu M. 1976. Studies on Hypocrea, Trichoderma and allied fungi antagonistic to shiitake, Lentinus edodes (Berk.) Sing. Rep Tottori Mycol Inst (Japan) 13:1-113.
21. Kuhls K, Lieckfeldt E, Börner T, Guého E. 1999. Molecular re-identification of human pathogenic Trichoderma isolates as Trichoderma longibrachiatum and Trichoderma citrinoviride. Med Mycol 37:2-33.
22. Leache AD, Reeder TW. 2002. Molecular systematics of the eastern fence lizard (Scloporus undulates): a comparison of parsimony, likelihood and Bayesian approaches. Syst Biol 51:44-68.
23. Lieckfeldt E, Kullnig C, Samuels GJ, Kubicek CP. 2000. Sexually competent, sucrose- and nitrate-assimilating strains of Hypocrea jecorina (Trichoderma reesei) from South American soils. Mycologia 92:374-380
24. Maddison DR, Maddison WM. 2005. MacClade 4: analysis of phylogeny and character evolution. Version 4.08. Sunderland, Massachusetts: Sinauer Associates.
25. Mathieson MJ. 1952. Ascospore dimorphism and mating type in Chromocrea spinulosa (Fuckel) Petch n. comb. Ann Bot ns 16:449-466 + plates XXI, XXII.
26. Matsuura K, Shima O, Takeda Y, Takaishi Y, Nagoaka Y, Fujita T. 1994. Fungal metabolites VX. Primary structures of antibiotic peptides, hypelcins B-1, B-II, B-III, B-IV and B-V, from Hypocrea peltata: application of electrospray mass spectrometry and electrospray mass spectrometry/mass spectrometry. Chem Pharm Bull 42:1063-1069.
27. Matsuzaki K, Takaishi Y, Fujita T, Miyajima K. 1991. Hypelcin A, an α-aminoisobutyric acid containing antibiotic peptide, induced fusion of egg yolk-L-αphosphatidylcholine small unilamellar vesicles. Colloid Polymer Sci 269:604-611.
28. Neuhof T, Dieckmann R, Druzhinina IS, Kubicek CP, von Döhren H. 2007a. Intact-cell MALDI-TOF mass spectrometry analysis of peptaibol formation by the genus Trichoderma/Hypocrea: Can molecular phylogeny of species predict peptaibol structures? Microbiology 153: 3417-3437.
29. Neuhof T, Dieckmann R, Druzhinina IS, Kubicek CP, Nakari-Setälä T, Penttilä M, von Döhren H. 2007b. Direct identification of hydrophobins and their processing in Trichoderma using intact-cell MALDI-TOF mass spectrometry. FEBS J 274: 841-852.
30. Nirenberg HI. 1976. Untersuchungen über die morphologische und biologische Differenzierung in der Fusarium- Sektion Liseola. Mitt Biol Bundesanst Land- Forstw Inst Berlin-Dahlem 169:i-v + 1-117.
31. O'Donnell K, Cigelnik E, Nirenberg HI. 1998. Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90:465-493.
32. Overton BE, Stewart EL, Geiser DM, Jaklitsch WM. 2006a. Systematics of Hypocrea citrina and related taxa. Stud Mycol 56:1-38.
33. Overton BE, Stewart EL, Geiser DM. 2006b. Taxonomy and phylogenetic relationships of nine species of Hypocrea with anamorphs assignable to Trichoderma sect. Hypocreanum. Stud Mycol 56:39-65.
34. Perkins DD. 1987. Mating-type shifting in filamentous ascomycetes. Letter to the editor. Genetics 115:215-216.
35. Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:917-918.
36. Rehner S, Samuels GJ. 1994. Taxonomy and phylogeny of Gliocladium analyzed from nuclear large subunit ribosomal DNA sequences. Mycologia 98:625-634.
37. Samuels GJ, Ismaiel A. 2009. Trichoderma evansii and T. lieckfeldtiae: two new T. hamatum-like species. Mycologia 101:142-156.
38. Samuels GJ, Lodge DJ. 1996. Three species of Hypocrea with stipitate stromata and Trichoderma anamorphs. Mycologia 83:302-315.
39. Samuels GJ, Suarez C, Solis K, Holmes KA, Thomas SE, Ismaiel A, Evans HC. 2006. Trichoderma theobromicola and T. paucisporum: two new species isolated from cacao in South America. Mycol Res 110:381-392.
40. Swofford DL. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Sunderland, Massachusetts: Sinauer Associates.
41. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X Windows interface; flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24: 4876-4882.
42. Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238-4246.
43. Viterbo A, Chet I. 2006. TasHyd1, a new hydrophobin gene from the biocontrol agent Trichoderma asperellum is involved in plant root colonization. Mol Plant Pathol 7: 249-258.
44. Volkmann-Kohlmeyer B, Kohlmeyer J. 1996. How to prepare truly permanent microscope slides. Mycologist 10:107-108.
45. White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ,