Characterization of H1N1 swine influenza viruses circulating in Canadian pigs in 2009

Journal of Virology

Volumn 85, Issue 17, 2011, Pages 8667-8679

  Nfon, Charles K ^a   Berhane, Yohannes ^a   Hisanaga, Tamiko ^a   Zhang, Shunzhen ^a   Handel, Katherine ^a   Kehler, Helen ^a   Labrecque, Olivia ^b   Lewis, Nicola S ^d   Vincent, Amy L ^c   Copps, John ^a   Alexandersen, Soren ^a   Pasick, John ^a  

^a National Centres for Animal Disease   (Canada)

^b Laboratoire d'Epidemiosurveillance Animale du Quebec   (Canada)

^c U S DEPARTMENT OF AGRICULTURE   (United States)

^d UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

INFLUENZA VIRUS HEMAGGLUTININ; OSELTAMIVIR; VIRUS SIALIDASE;

2009 H1N1 INFLUENZA; AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANIMAL EXPERIMENT; ANTIGENICITY; ANTIVIRAL RESISTANCE; ARTICLE; CANADA; CONTROLLED STUDY; CROSS REACTION; GENE CASSETTE; GENETIC MARKER; GENETIC REASSORTMENT; HEMAGGLUTININ GENE; NEURAMINIDASE GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SPECIES DIFFERENTIATION; SWINE; UNINDEXED SEQUENCE; VIRUS CHARACTERIZATION; VIRUS GENE; VIRUS ISOLATION; VIRUS NEUTRALIZATION;

ANIMALS; ANTIGENS, VIRAL; CANADA; CLUSTER ANALYSIS; CROSS REACTIONS; GENOTYPE; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; HUMANS; INFLUENZA A VIRUS, H1N1 SUBTYPE; MOLECULAR SEQUENCE DATA; NEURAMINIDASE; PARAMYXOVIRIDAE INFECTIONS; PHYLOGENY; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SWINE; SWINE DISEASES; VIRAL PROTEINS;

ORTHOMYXOVIRIDAE; SIMIAN IMMUNODEFICIENCY VIRUS; SUIDAE; SWINE INFLUENZA VIRUS;

EID: 80052298982     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.00801-11     Document Type: Article

References (29)

1. Bastien, N., et al. 2010. Human infection with a triple-reassortant swine influenza A(H1N1) virus containing the hemagglutinin and neuraminidase genes of seasonal influenza virus. J. Infect. Dis. 201:1178-1182.
2. Brookes, S. M., et al. 2009. Influenza A (H1N1) infection in pigs. Vet. Rec. 164:760-761.
3. Dawood, F. S., et al. 2009. Emergence of a novel swine-origin influenza A (H1N1) virus in humans. N. Engl. J. Med. 360:2605-2615.
4. de Jong, J. C., et al. 2007. Antigenic and genetic evolution of swine influenza A (H3N2) viruses in Europe. J. Virol. 81:4315-4322.
5. Forgie, S. E., et al. 2011. Swine outbreak of pandemic influenza A virus on a Canadian research farm supports human-to-swine transmission. Clin. Infect. Dis. 52:10-18.
6. Garten, R. J., et al. 2009. Antigenic and genetic characteristics of swineorigin 2009 A(H1N1) influenza viruses circulating in humans. Science 325:197-201.
7. Hoffmann, E., J. Stech, Y. Guan, R. G. Webster, and D. R. Perez. 2001. Universal primer set for the full-length amplification of all influenza A viruses. Arch. Virol. 146:2275-2289.
8. Howden, K. J., et al. 2009. An investigation into human pandemic influenza virus (H1N1) 2009 on an Alberta swine farm. Can. Vet. J. 50:1153-1161.
9. Karasin, A. I., I. H. Brown, S. Carman, and C. W. Olsen. 2000. Isolation and characterization of H4N6 avian influenza viruses from pigs with pneumonia in Canada. J. Virol. 74:9322-9327.
10. Karasin, A. I., S. Carman, and C. W. Olsen. 2006. Identification of human H1N2 and human-swine reassortant H1N2 and H1N1 influenza A viruses among pigs in Ontario, Canada (2003 to 2005). J. Clin. Microbiol. 44:1123-1126.
11. Karasin, A. I., et al. 2000. H4N6 influenza virus isolated from pigs in Ontario. Can. Vet. J. 41:938-939.
12. Lange, E., et al. 2009. Pathogenesis and transmission of the novel swineorigin influenza virus A/H1N1 after experimental infection of pigs. J. Gen. Virol. 90:2119-2123.
13. Lorusso, A., et al. 2010. Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008. J. Gen. Virol. 92:919-930.
14. Myers, K. P., C. W. Olsen, and G. C. Gray. 2007. Cases of swine influenza in humans: a review of the literature. Clin. Infect. Dis. 44:1084-1088.
15. Nfon, C., et al. 2011. Molecular and antigenic characterization of triple-reassortant H3N2 swine influenza viruses isolated from pigs, turkey and quail in Canada. Transbound Emerg. Dis. doi:10.1111/j.1865-1682.2011.01219.x.
16. Pasma, T., and T. Joseph. 2010. Pandemic (H1N1) 2009 infection in swine herds, Manitoba, Canada. Emerg. Infect. Dis. 16:706-708.
17. Pereda, A., et al. 2010. Pandemic (H1N1) 2009 outbreak on pig farm, Argentina. Emerg. Infect. Dis. 16:304-307.
18. Reid, A. H., T. G. Fanning, J. V. Hultin, and J. K. Taubenberger. 1999. Origin and evolution of the 1918 "Spanish" influenza virus hemagglutinin gene. Proc. Natl. Acad. Sci. U. S. A. 96:1651-1656.
19. Rekik, M. R., D. J. Arora, and S. Dea. 1994. Genetic variation in swine influenza virus A isolate associated with proliferative and necrotizing pneumonia in pigs. J. Clin. Microbiol. 32:515-518.
20. Smith, D. J., et al. 2004. Mapping the antigenic and genetic evolution of influenza virus. Science 305:371-376.
21. Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software, version 4.0. Mol. Biol. Evol. 24:1596-1599.
22. Vincent, A. L., et al. 2010. Efficacy of inactivated swine influenza virus vaccines against the 2009 A/H1N1 influenza virus in pigs. Vaccine 28:2782-2787.
23. Vincent, A. L., et al. 2009. Characterization of a newly emerged genetic cluster of H1N1 and H1N2 swine influenza virus in the United States. Virus Genes 39:176-185.
24. Vincent, A. L., W. Ma, K. M. Lager, B. H. Janke, and J. A. Richt. 2008. Swine influenza viruses a North American perspective. Adv. Virus Res. 72:127-154.
25. Vincent, A. L., et al. 2009. Characterization of an influenza A virus isolated from pigs during an outbreak of respiratory disease in swine and people during a county fair in the United States. Vet. Microbiol. 137:51-59.
26. Weingartl, H. M., et al. 2010. Genetic and pathobiologic characterization of pandemic H1N1 2009 influenza viruses from a naturally infected swine herd. J. Virol. 84:2245-2256.
27. Welsh, M. D., et al. 2010. Initial incursion of pandemic (H1N1) 2009 influenza A virus into European pigs. Vet. Rec. 166:642-645.
28. Wise, H. M., et al. 2009. A complicated message: identification of a novel PB1-related protein translated from influenza A virus segment 2 mRNA. J. Virol. 83:8021-8031.
29. Zhou, N. N., et al. 1999. Genetic reassortment of avian, swine, and human influenza A viruses in American pigs. J. Virol. 73:8851-8856.