Molecular epidemiology of norovirus gastroenteritis in children in Jiangmen, China, 2005-2007

Archives of Virology

Volumn 156, Issue 9, 2011, Pages 1641-1646

  Dai, Ying chun ^a   Hu, Gui fang ^a   Zhang, Xu fu ^a   Song, Can lei ^a   Xiang, Wen long ^a   Wu, Xian bo ^a   Wang, Le yi ^b   Jiang, Xi ^b,c   Nie, Jun ^a  

^a SOUTHERN MEDICAL UNIVERSITY   (China)

^b CINCINNATI CHILDREN'S HOSPITAL MEDICAL CENTER   (United States)

^c UNIVERSITY OF CINCINNATI COLLEGE OF MEDICINE   (United States)

Author keywords

Acute gastroenteritis; Calicivirus; Diarrhea; Norovirus; Recombinant; Sporadic cases

Indexed keywords

ARTICLE; CALICIVIRUS INFECTION; CHINA; FECES; GASTROENTERITIS; GENETICS; HUMAN; INFANT; MOLECULAR EPIDEMIOLOGY; NEWBORN; NOROVIRUS; PHYLOGENY; PRESCHOOL CHILD; SEASON; TIME; VIROLOGY;

CALICIVIRIDAE INFECTIONS; CHILD, PRESCHOOL; CHINA; FECES; GASTROENTERITIS; HUMANS; INFANT; INFANT, NEWBORN; MOLECULAR EPIDEMIOLOGY; NOROVIRUS; PHYLOGENY; SEASONS; TIME FACTORS;

CALICIVIRIDAE; NOROVIRUS; ROTAVIRUS;

EID: 80052264435     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-011-1010-3     Document Type: Article

References (44)

1. Bon F, Ambert-Balay K, Giraudon H, Kaplon J, Le Guyader S, Pommepuy M, Gallay A, Vaillant V, de Valk H, Chikhi-Brachet R, Flahaut A, Pothier P, Kohli E (2005) Molecular epidemiology of caliciviruses detected in sporadic and outbreak cases of gastroenteritis in France from December 1998 to February 2004. J Clin Microbiol 43: 4659-4664.
2. Bull RA, Tanaka MM, White PA (2007) Norovirus recombination. J Gen Virol 88: 3347-3359.
3. Cheng WX, Ye XH, Yang XM, Li YN, Jin M, Jin Y, Duan ZJ (2010) Epidemiological study of human calicivirus infection in children with gastroenteritis in Lanzhou from 2001 to 2007. Arch Virol 155: 553-555.
4. Chhabra P, Dhongade RK, Kalrao VR, Bavdekar AR, Chitambar SD (2009) Epidemiological, clinical, and molecular features of norovirus infections in western India. J Med Virol 81: 922-932.
5. Chhabra P, Walimbe AM, Chitambar SD (2010) Molecular characterization of three novel intergenotype norovirus GII recombinant strains from western India. Virus Res 147: 242-246.
6. Dai YC, Nie J, Zhang XF, Li ZF, Bai Y, Zeng ZR, Yu SY, Farkas T, Jiang X (2004) Seroprevalence of antibodies against noroviruses among students in a Chinese military medical university. J Clin Microbiol 42: 4615-4619.
7. Dai YC, Xia M, Zhan HC, Liu Y, Li JD, Chen Q, Yu SY, Nie J, Farkas T, Jiang X (2010) Surveillance and risk factors of norovirus gastroenteritis among children in a southern city of China in the fall-winter seasons of 2003-2006. J Paediatr Child Health 46: 45-50.
8. Dey SK, Phan TG, Mizuguchia M, Okitsua S, Ushijima H (2010) Novel recombinant norovirus in Japan. Virus Genes 40: 362-364.
9. Eden JS, Bull RA, Tu E, McIver CJ, Lyon MJ, Marshall JA, Smith DW, Musto J, Rawlinson WD, White PA (2010) Norovirus GII. 4 variant 2006b caused epidemics of acute gastroenteritis in Australia during 2007 and 2008. J Clin Virol 49: 265-271.
10. Ferreira MS, Victoria M, Carvalho-Costa FA, Vieira CB, Xavier MP, Fioretti JM, Andrade J, Volotao EM, Rocha M, Leite JP, Miagostovich MP (2010) Surveillance of norovirus infections in the state of Rio De Janeiro, Brazil 2005-2008. J Med Virol 82: 1442-1448.
11. Fukuda S, Sasaki Y, Takao S, Seno M (2008) Recombinant norovirus implicated in gastroenteritis outbreaks in Hiroshima Prefecture, Japan. J Med Virol 80: 921-928.
12. Guo L, Song J, Xu X, Ren L, Li J, Zhou H, Wang M, Qu J, Wang J, Hung T (2009) Genetic analysis of norovirus in children affected with acute gastroenteritis in Beijing, 2004-2007. J Clin Virol 44: 94-98.
13. Hardy ME (2005) Norovirus protein structure and function. Fems Microbiol Lett 253: 1-8.
14. Jiang X, Wang M, Graham DY, Estes MK (1992) Expression, self-assembly, and antigenicity of the Norwalk virus capsid protein. J Virol 66: 6527-6532.
15. Jin M, Xie HP, Duan ZJ, Liu N, Zhang Q, Wu BS, Li HY, Cheng WX, Yang SH, Yu JM (2008) Emergence of the GII4/2006b variant and recombinant noroviruses in China. J Med Virol 80: 1997-2004.
16. Jin Y, Cheng WX, Yang XM, Jin M, Zhang Q, Xu ZQ, Yu JM, Zhu L, Yang SH, Liu N, Cui SX, Fang ZY, Duan ZJ (2009) Viral agents associated with acute gastroenteritis in children hospitalized with diarrhea in Lanzhou, China. J Clin Virol 44: 238-241.
17. Katayama K, Shirato-Horikoshi H, Kojima S, Kageyama T, Oka T, Hoshino F, Fukushi S, Shinohara M, Uchida K, Suzuki Y, Gojobori T, Takeda N (2002) Phylogenetic analysis of the complete genome of 18 Norwalk-like viruses. Virology 299: 225-239.
18. Khamrin P, Maneekarn N, Thongprachum A, Chaimongkol N, Okitsu S, Ushijima H (2010) Emergence of new norovirus variants and genetic heterogeneity of noroviruses and sapoviruses in children admitted to hospital with diarrhea in Thailand. J Med Virol 82: 289-296.
19. Kojima S, Kageyama T, Fukushi S, Hoshino FB, Shinohara M, Uchida K, Natori K, Takeda N, Katayama K (2002) Genogroup-specific PCR primers for detection of Norwalk-like viruses. J Virol Methods 100: 107-114.
20. Li H, Mo YL, Ke CW, Zheng HZ, Zhou XH, Guo RN, Chen QX, Fang L, Zou LR (2010) Molecular epidemiological characteristics of norovirus gastroenteritis outbreaks in Guangdong from 2005 to 2008. Bing Du Xue Bao 26: 202-207.
21. Lindesmith LC, Donaldson EF, Lobue AD, Cannon JL, Zheng DP, Vinje J, Baric RS (2008) Mechanisms of GII. 4 norovirus persistence in human populations. PLoS Med 5: e31.
22. Liu C, Grillner L, Jonsson K, Linde A, Shen K, Lindell AT, Wirgart BZ, Johansen K (2006) Identification of viral agents associated with diarrhea in young children during a winter season in Beijing, China. J Clin Virol 35: 69-72.
23. Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, Ray SC (1999) Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73: 152-160.
24. Marshall JA, Hellard ME, Sinclair MI, Fairley CK, Cox BJ, Catton MG, Kelly H, Wright PJ (2003) Incidence and characteristics of endemic Norwalk-like virus-associated gastroenteritis. J Med Virol 69: 568-578.
25. Motomura K, Oka T, Yokoyama M, Nakamura H, Mori H, Ode H, Hansman GS, Katayama K, Kanda T, Tanaka T, Takeda N, Sato H (2008) Identification of monomorphic and divergent haplotypes in the 2006-2007 norovirus GII/4 epidemic population by genome wide tracing of evolutionary history. J Virol 82: 11247-11262.
26. Nayak MK, Balasubramanian G, Sahoo GC, Bhattacharya R, Vinje J, Kobayashi N, Sarkar MC, Bhattacharya MK, Krishnan T (2008) Detection of a novel intergenogroup recombinant Norovirus from Kolkata, India. Virology 377: 117-123.
27. Nayak MK, Chatterjee D, Nataraju SM, Pativada M, Mitra U, Chatterjee MK, Saha TK, Sarkar U, Krishnan T (2009) A new variant of Norovirus GII. 4/2007 and inter-genotype recombinant strains of NVGII causing acute watery diarrhoea among children in Kolkata, India. J Clin Virol 45: 223-229.
28. Nenonen NP, Hannoun C, Olsson MB, Bergstrom T (2009) Molecular analysis of an oyster-related norovirus outbreak. J Clin Virol 45: 105-108.
29. Nguyen TA, Yagyu F, Okame M, Phan TG, Trinh QD, Yan H, Hoang KT, Cao AT, Le Hoang P, Okitsu S, Ushijima H (2007) Diversity of viruses associated with acute gastroenteritis in children hospitalized with diarrhea in Ho Chi Minh City, Vietnam. J Med Virol 79: 582-590.
30. Patel MM, Widdowson MA, Glass RI, Akazawa K, Vinje J, Parashar UD (2008) Systematic literature review of role of noroviruses in sporadic gastroenteritis. Emerg Infect Dis 14: 1224-1231.
31. Phan TG, Kaneshi K, Ueda Y, Nakaya S, Nishimura S, Yamamoto A, Sugita K, Takanashi S, Okitsu S, Ushijima H (2007) Genetic heterogeneity, evolution, and recombination in noroviruses. J Med Virol 79: 1388-1400.
32. Pletneva MA, Sosnovtsev SV, Green KY (2001) The genome of Hawaii virus and its relationship with other members of the caliciviridae. Virus Genes 23: 5-16.
33. Sdiri-Loulizi K, Ambert-Balay K, Gharbi-Khelifi H, Sakly N, Hassine M, Chouchane S, Guediche MN, Pothier P, Aouni M (2009) Molecular epidemiology of norovirus gastroenteritis investigated using samples collected from children in Tunisia during a four-year period: detection of the norovirus variant GGII. 4 Hunter as early as January 2003. J Clin Microbiol 47: 421-429.
34. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
35. ter Waarbeek HL, Dukers-Muijrers NH, Vennema H, Hoebe CJ (2010) Waterborne gastroenteritis outbreak at a scouting camp caused by two norovirus genogroups: GI and GII. J Clin Virol 47: 268-272.
36. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
37. Tseng FC, Leon JS, MacCormack JN, Maillard JM, Moe CL (2007) Molecular epidemiology of norovirus gastroenteritis outbreaks in North Carolina, United States: 1995-2000. J Med Virol 79: 84-91.
38. Vinje J, Koopmans MP (1996) Molecular detection and epidemiology of small round-structured viruses in outbreaks of gastroenteritis in the Netherlands. J Infect Dis 174: 610-615.
39. Wadl M, Scherer K, Nielsen S, Diedrich S, Ellerbroek L, Frank C, Gatzer R, Hoehne M, Johne R, Klein G, Koch J, Schulenburg J, Thielbein U, Stark K, Bernard H (2010) Food-borne norovirus-outbreak at a military base, Germany, 2009. BMC Infect Dis 10: 30.
40. Wu FT, Oka T, Katayama K, Wu HS, Donald JD, Miyamura T, Takeda N, Hansman GS (2006) Genetic diversity of noroviruses in Taiwan between November 2004 and March 2005. Arch Virol 151: 1319-1327.
41. Xu J, Yang Y, Sun J, Ding Y (2009) Molecular epidemiology of norovirus infection among children with acute gastroenteritis in Shanghai, China, 2001-2005. J Med Virol 81: 1826-1830.
42. Yang Y, Xia M, Tan M, Huang P, Zhong W, Pang XL, Lee BE, Meller J, Wang T, Jiang X (2010) Genetic and phenotypic characterization of GII-4 noroviruses that circulated during 1987 to 2008. J Virol 84: 9595-9607.
43. Yoon JS, Lee SG, Hong SK, Lee SA, Jheong WH, Oh SS, Oh MH, Ko GP, Lee CH, Paik SY (2008) Molecular epidemiology of norovirus infections in children with acute gastroenteritis in South Korea in November 2005 through November 2006. J Clin Microbiol 46: 1474-1477.
44. Zheng DP, Ando T, Fankhauser RL, Beard RS, Glass RI, Monroe SS (2006) Norovirus classification and proposed strain nomenclature. Virology 346: 312-323.