N.I. Vavilov's theory of centres of diversity in the light of current understanding of wheat diversity, domestication and evolution

Czech Journal of Genetics and Plant Breeding

Volumn 47, Issue SPEC. ISSUE 1, 2011, Pages

  Dvorak, J ^a   Luo, M Ch ^a   Akhunov, E D ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b KANSAS STATE UNIVERSITY   (United States)

Author keywords

Domestication; Emmer; Gene flow; Nucleotide diversity; Triticum aestivum; Triticum dicoccoides

Indexed keywords

TRITICUM AESTIVUM; TRITICUM DICOCCON; TRITICUM MONOCOCCUM; TRITICUM TURGIDUM SUBSP. DICOCCOIDES;

EID: 80052259153     PISSN: 12121975     EISSN: None     Source Type: Journal    
DOI: 10.17221/3249-cjgpb     Document Type: Article

References (37)

1. Akhunov E.D., Akhunova A.R., Dvorak J. (2005): BAC libraries of Triticum urartu, Aegilops speltoides and Ae. tauschii, the diploid ancestors of polyploid wheat. Theoretical and Applied Genetics, 111: 1617-1622.
2. Akhunov E.D., Akhunova A.R., Anderson O.D., Anderson J.A., Blake N., Clegg M.T., Coleman-Derr D., Conley E.J., Crossman C.C., Deal K.R., Dubcovsky J., Gill B.S., Gu Y.Q., Hadam J., Heo H., Huo N., Lazo G.R., Luo M.C., Ma Y.Q., Matthews D.E., McGuire P.E., Morrell P.L., Qualset C.O., Renfro J., Tabanao D., Talbert L.E., Tian C., Toleno D.M., Warburton M.L., You F.M., Zhang W., Dvorak J. (2010): Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics, 11: 702.
3. Balfourier F., Roussel V., Strelchenko P., Exbrayat-Vinson F., Sourdille P., Boutet G., Koenig J., Ravel C., Mitrofanova O., Beckert M., Charmet G. (2007): A worldwide bread wheat core collection arrayed in a 384-well plate. Theoretical and Applied Genetics, 114: 1265-1275.
4. Buckler E.S., Thornsberry J.M., Kresovich S. (2001): Molecular diversity, structure and domestication of grasses. Genetical Research, 77: 213-218.
5. Dvorak J., Luo M.-C. (1999): Evolution of free-threshing and hulled forms of Triticum aestivum: old problems and new tools. In: Caligari P.D.S., Brandham P.E. (eds): Wheat Taxonomy: the Legacy of John Percival. Academic Press, London, 127-136.
6. Dvorak J., Akhunov E.D. (2005): Tempos of deletions and duplications of gene loci in relation to recombina tion rate during diploid and polyploid evolution in the Aegilops-Triticum alliance. Genetics, 171: 323-332.
7. Dvorak J., Luo M.C., Yang Z.L., Zhang H.B. (1998): The structure of the Aegilops tauschii genepool and the evolution of hexaploid wheat. Theoretical and Applied Genetics, 97: 657-670.
8. Dvorak J., Akhunov E.D., Akhunov A.R., Deal K.R., Luo M.C. (2006): Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheat. Molecular Biology and Evolution, 23: 1386-1396.
9. Gokgol M. (1941): Über die Genzentrentheorie und den Ursprung des Weizens. Zeitschrift für Pflanzenzüchtung, 23: 562-578.
10. Gordon D. (2004): Viewing and editing assembled sequences using consed. In: Baxevanis A.D., Davison D.B. (eds): Current Protocols in Bioinformatics. John Wiley & Co., New York, 11.12.11-11.12.43.
11. Green P. (1998): swat/cross_match/phrap package. Available at http://bozeman.mbt.washington.edu/phrap.docs/phrap.html.
12. Harlan J.R. (1971): Agricultural origins: centers and noncenters. Science, 174: 468-474.
13. Harlan J.R. (1975): Crops and Man. American Society of Agronomy, Madison.
14. Haudry A., Cenci A., Ravel C., Bataillon T., Brunel D., Poncet C., Hochu I., Poirier S., Santoni S., Glemin S., David J. (2007): Grinding up wheat: a massive loss of nucleotide diversity since domestication. Molecular Biology and Evolution, 24: 1506-1517.
15. Heun M., Schafer-Pregel R., Klawan D., Castagna R., Accerbi M., Borghi B., Salamini F. (1997): Site of einkorn wheat domestication identified by DNA fingerprinting. Science, 278: 1312-1314.
16. Huang S., Sirikhachornkit A., Su X., Faris J., Gill B.S., Haselkorn R., Gornicki P. (2002): Genes encoding plastid acetyl-CoA carboxylase and 3-phopshoglycerate kinase of the Triticum/Aegilops complex and the evolutionary history of polyploid wheat. Proceedings of the National Academy of Sciences of the United States of America, 99: 8133-8138.
17. Hyten D.L., Song Q.J., Zhu Y.L., Choi I.Y., Nelson R.L., Costa J.M., Specht J.E., Shoemaker R.C., Cregan P.B. (2006): Impacts of genetic bottlenecks on soybean genome diversity. Proceedings of the National Academy of Sciences of the United States of America, 103: 16666-16671.
18. Kihara H. (1944): Discovery of the DD-analyser, one of the ancestors of Triticum vulgare (Japanese). Agriculture and Horticulture (Tokyo), 19: 13-14.
19. Kilian B., Ozkan H., Walther A., Kohl J., Dagan T., Salamini F., Martin W. (2007): Molecular diversity at 18 loci in 321 wild and 92 domesticate lines reveal no reduction of nucleotide diversity during Triticum monococcum (einkorn) domestication: Implications for the origin of agriculture. Molecular Biology and Evolution, 24: 2657-2668.
20. Luo M.C., Yang Z.L., You F.M., Kawahara T., Waines J.G., Dvorak J. (2007): The structure of wild and domesticated emmer wheat populations, gene flow between them, and the site of emmer domestication. Theoretical and Applied Genetics, 114: 947-959.
21. Luo M.C., Deal K.R., Akhunov E.D., Akhunova A.R., Anderson O.D., Anderson J.A., Blake N., Clegg M.T., Coleman-Derr D., Conley E.E., Crossman C.C., Dubcovsky J., Gill B.S., Gu Y.Q., Hadam J., Heo H.Y., Huo N., Lazo G., Ma Y.Q., Matthews D.E., McGuire P.E., Morrell P.L., Qualset C.O., Renfro J., Tabanao D., Talbert L.E., Tian C., Toleno D.M., Warburton M.L., You F.M., Zhang W.J., Dvorak J. (2009): Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae. Proceedings of the National Academy of Sciences of the United States of America, 106: 15780-15785.
22. McFadden E.S., Sears E.R. (1946): The origin of Triticum spelta and its free-threshing hexaploid relatives. Journal of Heredity, 37: 81-89, 107-116.
23. st Int. Workshop Hulled Wheats. International Plant Genetic Resources Institute, Rome, Castelvecchio Pacoli, Tuscany, 41-100.
24. Ozkan H., Brandolini A., Pozzi C., Effgen S., Wunder J., Salamini F. (2005): A reconsideration of the domestication geography of tetraploid wheat. Theoretical and Applied Genetics, 110: 1052-1060.
25. Schiemann E. (1939): Gedanken zur Genzentrentheorie Vavilovs. Naturwissenschaften, 27: 377-383.
26. Tajima F. (1983): Evolutionary relationship of DNA sequences in finite populations. Genetics, 105: 437-460.
27. Tajima F. (1989): Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123: 585-595.
28. Tsunewaki K. (1966): Comparative gene analysis of common wheat and its ancestal species. II. Waxiness, growth habit and awnedness. Japanese Journal of Botany, 19: 175-229.
29. rd Int. Wheat Genetic Symposium. Australian Academy of Sciences, Canberra, 71-85.
30. Vavilov N.I. (1926): Studies on the origin of cultivated plants. (Russian) Bulletin of Applied Botany and Plant Breeding, 14: 1-245.
31. Vavilov N.I. (1992): Origin and Geography of Cultivated Plants. Cambridge University Press, Cambridge.
32. Watterson G.A. (1975): On the number of segregating sites in genetical models without recombination. Theoretical Population Biology, 7: 256-276.
33. Wheat SNP Database. Available at http://probes.pw.usda.gov:8080/snpworld/Search
34. Wright S.I., Bi I.V., Schroeder S.G., Yamasaki M., Doebley J.F., McMullen M.D., Gaut B S. (2005): The effects of artificial selection on the maize genome. Science, 308: 1310-1314.
35. th Int. Plant and Animal Genome Conference. Scherago International, Inc., San Diego.
36. Zohary D. (1970): Centers of diversity and centers of origin. In: Frankel O.H., Bennett E. (eds): Genetic Resources in Plants-their Exploration and Conservation. Blackwell Science Publishing, Oxford, 33-42.
37. Zohary D., Hopf M. (1994): Domestication of Plants in the Old World. Clarendon Press, Oxford.