Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples

Journal of Clinical Microbiology

Volumn 49, Issue 9, 2011, Pages 3268-3275

  Cheval, Justine ^a,e   Sauvage, Virginie ^a   Frangeul, Lionel ^a   Dacheux, Laurent ^a   Guigon, Ghislaine ^a   Dumey, Nicolas ^b   Pariente, Kevin ^a   Rousseaux, Claudine ^a   Dorange, Fabien ^b   Berthet, Nicolas ^c   Brisse, Sylvain ^a   Moszer, Ivan ^a   Bourhy, Hervé ^a   Manuguerra, Claude Jean ^a   Lecuit, Marc ^a   Burguiere, Ana ^a   Caro, Valérie ^a   Eloit, Marc ^a,d  

^a INSTITUT PASTEUR   (France)

^b Texcell   (France)

^c CNRS   (France)

^d ECOLE NATIONALE VÉTÉRINAIRE D ALFORT   (France)

^e Pathoquest   (France)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; DOUBLE STRANDED RNA; SINGLE STRANDED DNA; SINGLE STRANDED RNA;

ANALYZER; ARTICLE; BLOOD CULTURE; BOVINE DIARRHEA VIRUS; CEREBROSPINAL FLUID CULTURE; CONTIG MAPPING; CONTROLLED STUDY; CYTOMEGALOVIRUS; GENOME ANALYSIS; HELA CELL; HEPATITIS B VIRUS; HEPATITIS C VIRUS; HERPES SIMPLEX VIRUS 1; HIGH THROUGHPUT SEQUENCING; HUMAN; HUMAN ADENOVIRUS 5; HUMAN CELL; HUMAN PARVOVIRUS B19; INFLUENZA VIRUS A H3N8; INFLUENZA VIRUS B; LIMIT OF DETECTION; NONHUMAN; POLIOMYELITIS VIRUS; PRIORITY JOURNAL; PYROSEQUENCING; QUANTITATIVE ANALYSIS; RABIES VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SENSITIVITY ANALYSIS; SEQUENCE DATABASE; VIRUS CONCENTRATION; VIRUS DETECTION; VIRUS GENOME; VIRUS IDENTIFICATION; VIRUS LOAD;

DNA, VIRAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; REAL-TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, VIRAL; SENSITIVITY AND SPECIFICITY; VIROLOGY; VIRUSES;

EID: 80052221189     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00850-11     Document Type: Article

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