메뉴 건너뛰기




Volumn 39, Issue 13, 2011, Pages 5669-5681

A structural determinant required for RNA editing

Author keywords

[No Author keywords available]

Indexed keywords

4 AMINOBUTYRIC ACID A RECEPTOR ALPHA3; ADENOSINE;

EID: 80052210856     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr144     Document Type: Article
Times cited : (31)

References (40)
  • 1
    • 0035997389 scopus 로고    scopus 로고
    • RNA editing by adenosine deaminases that act on RNA
    • DOI 10.1146/annurev.biochem.71.110601.135501
    • Bass, B.L. (2002) RNA editing by adenosine deaminases that act on RNA. Annu. Rev. Biochem., 71, 817-846. (Pubitemid 34800236)
    • (2002) Annual Review of Biochemistry , vol.71 , pp. 817-846
    • Bass, B.L.1
  • 2
    • 0037449770 scopus 로고    scopus 로고
    • A-to-I RNA editing: Recent news and residual mysteries
    • DOI 10.1074/jbc.R200025200
    • Maas, S., Rich, A. and Nishikura, K. (2003) A-to-I RNA editing: recent news and residual mysteries. J. Biol. Chem., 278, 1391-1394. (Pubitemid 36801360)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.3 , pp. 1391-1394
    • Maas, S.1    Rich, A.2    Nishikura, K.3
  • 3
    • 0034612640 scopus 로고    scopus 로고
    • Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2
    • DOI 10.1038/35017558
    • Higuchi, M., Maas, S., Single, F.N., Hartner, J., Rozov, A., Burnashev, N., Feldmeyer, D., Sprengel, R. and Seeburg, P.H. (2000) Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2. Nature, 406, 78-81. (Pubitemid 30460214)
    • (2000) Nature , vol.406 , Issue.6791 , pp. 78-81
    • Higuchi, M.1    Maas, S.2    Single, F.N.3    Hartner, J.4    Rozov, A.5    Burnashev, N.6    Feldmeyer, D.7    Sprengel, R.8    Seeburg, P.H.9
  • 4
    • 0034682706 scopus 로고    scopus 로고
    • A-to-I pre-mRNA editing in Drosophila is primarily involved in adult nervous system function and integrity
    • Palladino, M.J., Keegan, L.P., O'Connell, M.A. and Reenan, R.A. (2000) A-to-I pre-mRNA editing in Drosophila is primarily involved in adult nervous system function and integrity. Cell, 102, 437-449.
    • (2000) Cell , vol.102 , pp. 437-449
    • Palladino, M.J.1    Keegan, L.P.2    O'Connell, M.A.3    Reenan, R.A.4
  • 5
    • 0034535312 scopus 로고    scopus 로고
    • Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis
    • DOI 10.1126/science.290.5497.1765
    • Wang, Q., Khillan, J., Gadue, P. and Nishikura, K. (2000) Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis. Science, 290, 1765-1768. (Pubitemid 32004807)
    • (2000) Science , vol.290 , Issue.5497 , pp. 1765-1768
    • Wang, Q.1    Khillan, J.2    Gadue, P.3    Nishikura, K.4
  • 6
    • 0037112823 scopus 로고    scopus 로고
    • RNA editing by ADARs is important for normal behavior in Caenorhabditis elegans
    • DOI 10.1093/emboj/cdf607
    • Tonkin, L.A., Saccomanno, L., Morse, D.P., Brodigan, T., Krause, M. and Bass, B.L. (2002) RNA editing by ADARs is important for normal behavior in Caenorhabditis elegans. EMBO J., 21, 6025-6035. (Pubitemid 35415321)
    • (2002) EMBO Journal , vol.21 , Issue.22 , pp. 6025-6035
    • Tonkin, L.A.1    Saccomanno, L.2    Morse, D.P.3    Brodigan, T.4    Krause, M.5    Bass, B.L.6
  • 7
    • 0042528670 scopus 로고    scopus 로고
    • Nervous system targets of RNA editing identified by comparative genomics
    • DOI 10.1126/science.1086763
    • Hoopengardner, B., Bhalla, T., Staber, C. and Reenan, R. (2003) Nervous system targets of RNA editing identified by comparative genomics. Science, 301, 832-836. (Pubitemid 36962624)
    • (2003) Science , vol.301 , Issue.5634 , pp. 832-836
    • Hoopengardner, B.1    Bhalla, T.2    Staber, C.3    Reenan, R.4
  • 9
    • 0034974268 scopus 로고    scopus 로고
    • Substrate recognition by ADAR1 and ADAR2
    • DOI 10.1017/S135583820101007X
    • Wong, S.K., Sato, S. and Lazinski, D.W. (2001) Substrate recognition by ADAR1 and ADAR2. RNA, 7, 846-858. (Pubitemid 32552872)
    • (2001) RNA , vol.7 , Issue.6 , pp. 846-858
    • Wong, S.K.1    Sato, S.2    Lazinski, D.W.3
  • 10
    • 0344035669 scopus 로고    scopus 로고
    • The importance of internal loops within RNA substrates of ADAR1
    • DOI 10.1006/jmbi.1999.2914
    • Lehmann, K.A. and Bass, B.L. (1999) The importance of internal loops within RNA substrates of ADAR1. J. Mol. Biol., 291, 1-13. (Pubitemid 29391401)
    • (1999) Journal of Molecular Biology , vol.291 , Issue.1 , pp. 1-13
    • Lehmann, K.A.1    Bass, B.L.2
  • 11
    • 24644519954 scopus 로고    scopus 로고
    • Structural biology: Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing
    • DOI 10.1126/science.1113150
    • Macbeth, M.R., Schubert, H.L., Vandemark, A.P., Lingam, A.T., Hill, C.P. and Bass, B.L. (2005) Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing. Science, 309, 1534-1539. (Pubitemid 41266474)
    • (2005) Science , vol.309 , Issue.5740 , pp. 1534-1539
    • Macbeth, M.R.1    Schubert, H.L.2    VanDemark, A.F.3    Lingam, A.T.4    Hill, C.P.5    Bass, B.L.6
  • 12
    • 66449091242 scopus 로고    scopus 로고
    • The fraction of RNA that folds into the correct branched secondary structure determines hepatitis delta virus type 3 RNA editing levels
    • Linnstaedt, S.D., Kasprzak, W.K., Shapiro, B.A. and Casey, J.L. (2009) The fraction of RNA that folds into the correct branched secondary structure determines hepatitis delta virus type 3 RNA editing levels. RNA, 15, 1177-1187.
    • (2009) RNA , vol.15 , pp. 1177-1187
    • Linnstaedt, S.D.1    Kasprzak, W.K.2    Shapiro, B.A.3    Casey, J.L.4
  • 13
    • 12344300804 scopus 로고    scopus 로고
    • Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome
    • Athanasiadis, A., Rich, A. and Maas, S. (2004) Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome. PLoS Biol., 2, e391.
    • (2004) PLoS Biol , vol.2
    • Athanasiadis, A.1    Rich, A.2    Maas, S.3
  • 14
    • 34247372269 scopus 로고    scopus 로고
    • A receptor subunit α3
    • DOI 10.1261/rna.349107
    • Ohlson, J., Pedersen, J.S., Haussler, D. and Ohman, M. (2007) Editing modifies the GABA(A) receptor subunit alpha3. RNA, 13, 698-703. (Pubitemid 46641528)
    • (2007) RNA , vol.13 , Issue.5 , pp. 698-703
    • Ohlson, J.1    Pedersen, J.S.2    Haussler, D.3    Ohman, M.4
  • 16
    • 66449129109 scopus 로고    scopus 로고
    • Large-scale mRNA sequencing determines global regulation of RNA editing during brain development
    • Wahlstedt, H., Daniel, C., Enstero, M. and Ohman, M. (2009) Large-scale mRNA sequencing determines global regulation of RNA editing during brain development. Genome Res., 19, 978-986.
    • (2009) Genome Res , vol.19 , pp. 978-986
    • Wahlstedt, H.1    Daniel, C.2    Enstero, M.3    Ohman, M.4
  • 17
    • 66349122954 scopus 로고    scopus 로고
    • Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing
    • Li, J.B., Levanon, E.Y., Yoon, J.K., Aach, J., Xie, B., Leproust, E., Zhang, K., Gao, Y. and Church, G.M. (2009) Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing. Science, 324, 1210-1213.
    • (2009) Science , vol.324 , pp. 1210-1213
    • Li, J.B.1    Levanon, E.Y.2    Yoon, J.K.3    Aach, J.4    Xie, B.5    Leproust, E.6    Zhang, K.7    Gao, Y.8    Church, G.M.9
  • 18
    • 61649118956 scopus 로고    scopus 로고
    • RNA editing of the GABA(A) receptor alpha3 subunit alters the 5680 Nucleic Acids Research 2011
    • functional properties of recombinant receptors 63
    • Nimmich, M.L., Heidelberg, L.S. and Fisher, J.L. (2009) RNA editing of the GABA(A) receptor alpha3 subunit alters the 5680 Nucleic Acids Research, 2011, Vol. 39, No. 13 functional properties of recombinant receptors. Neurosci. Res., 63, 288-293.
    • (2009) Neurosci. Res. , vol.39 , Issue.13 , pp. 288-293
    • Nimmich, M.L.1    Heidelberg, L.S.2    Fisher, J.L.3
  • 19
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • DOI 10.1093/nar/gkg595
    • Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res., 31, 3406-3415. (Pubitemid 37442169)
    • (2003) Nucleic Acids Research , vol.31 , Issue.13 , pp. 3406-3415
    • Zuker, M.1
  • 20
    • 78049279838 scopus 로고    scopus 로고
    • Probing RNA structure within living cells
    • Liebeg, A. and Waldsich, C. (2009) Probing RNA structure within living cells. Methods Enzymol., 468, 219-238.
    • (2009) Methods Enzymol , vol.468 , pp. 219-238
    • Liebeg, A.1    Waldsich, C.2
  • 21
    • 33751099081 scopus 로고    scopus 로고
    • RNA aptamers binding the double-stranded RNA-binding domain
    • DOI 10.1261/rna.125506
    • Hallegger, M., Taschner, A. and Jantsch, M.F. (2006) RNA aptamers binding the double-stranded RNA-binding domain. RNA, 12, 1993-2004. (Pubitemid 44771758)
    • (2006) RNA , vol.12 , Issue.11 , pp. 1993-2004
    • Hallegger, M.1    Taschner, A.2    Jantsch, M.F.3
  • 22
    • 38649084399 scopus 로고    scopus 로고
    • A-to-I editing sites are a genomically encoded G: Implications for the evolutionary significance and identification of novel editing sites
    • DOI 10.1261/rna.797108
    • Tian, N., Wu, X., Zhang, Y. and Jin, Y. (2008) A-to-I editing sites are a genomically encoded G: implications for the evolutionary significance and identification of novel editing sites. RNA, 14, 211-216. (Pubitemid 351171581)
    • (2008) RNA , vol.14 , Issue.2 , pp. 211-216
    • Tian, N.1    Wu, X.2    Zhang, Y.3    Jin, Y.4
  • 23
    • 17844397456 scopus 로고    scopus 로고
    • A novel RNA pentaloop fold involved in targeting ADAR2
    • DOI 10.1261/rna.7276805
    • Stefl, R. and Allain, F.H. (2005) A novel RNA pentaloop fold involved in targeting ADAR2. RNA, 11, 592-597. (Pubitemid 40594327)
    • (2005) RNA , vol.11 , Issue.5 , pp. 592-597
    • Stefl, R.1    Allain, F.H.-T.2
  • 24
    • 0033962272 scopus 로고    scopus 로고
    • A phylogenetic analysis reveals an unusual sequence conservation within introns involved in RNA editing
    • DOI 10.1017/S1355838200991921
    • Aruscavage, P.J. and Bass, B.L. (2000) A phylogenetic analysis reveals an unusual sequence conservation within introns involved in RNA editing. RNA, 6, 257-269. (Pubitemid 30091596)
    • (2000) RNA , vol.6 , Issue.2 , pp. 257-269
    • Aruscavage, P.J.1    Bass, B.L.2
  • 25
    • 15244351357 scopus 로고    scopus 로고
    • Molecular determinants and guided evolution of species-specific RNA editing
    • DOI 10.1038/nature03364
    • Reenan, R.A. (2005) Molecular determinants and guided evolution of species-specific RNA editing. Nature, 434, 409-413. (Pubitemid 40469187)
    • (2005) Nature , vol.434 , Issue.7031 , pp. 409-413
    • Reenan, R.A.1
  • 26
    • 1042289731 scopus 로고    scopus 로고
    • Structure and Sequence Determinants Required for the RNA Editing of ADAR2 Substrates
    • DOI 10.1074/jbc.M310068200
    • Dawson, T.R., Sansam, C.L. and Emeson, R.B. (2004) Structure and sequence determinants required for the RNA editing of ADAR2 substrates. J. Biol. Chem., 279, 4941-4951. (Pubitemid 38199090)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.6 , pp. 4941-4951
    • Dawson, T.R.1    Sansam, C.L.2    Emeson, R.B.3
  • 28
    • 48549095628 scopus 로고    scopus 로고
    • Lower GC-content in editing exons: Implications for regulation by molecular characteristics maintained by selection
    • Cao, J., Wu, X. and Jin, Y. (2008) Lower GC-content in editing exons: implications for regulation by molecular characteristics maintained by selection. Gene, 421, 14-19.
    • (2008) Gene , vol.421 , pp. 14-19
    • Cao, J.1    Wu, X.2    Jin, Y.3
  • 29
    • 73349128788 scopus 로고    scopus 로고
    • Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA
    • Enstero, M., Daniel, C., Wahlstedt, H., Major, F. and Ohman, M. (2009) Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA. Nucleic Acids Res., 37, 6916-6926.
    • (2009) Nucleic Acids Res , vol.37 , pp. 6916-6926
    • Enstero, M.1    Daniel, C.2    Wahlstedt, H.3    Major, F.4    Ohman, M.5
  • 31
    • 0032535613 scopus 로고    scopus 로고
    • Molecular basis of double-stranded RNA-protein interactions: Structure of a dsRNA-binding domain complexed with dsRNA
    • DOI 10.1093/emboj/17.24.7505
    • Ryter, J.M. and Schultz, S.C. (1998) Molecular basis of double-stranded RNA-protein interactions: structure of a dsRNA-binding domain complexed with dsRNA. EMBO J., 17, 7505-7513. (Pubitemid 29002717)
    • (1998) EMBO Journal , vol.17 , Issue.24 , pp. 7505-7513
    • Ryter, J.M.1    Schultz, S.C.2
  • 32
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • DOI 10.1038/35053110
    • Bernstein, E., Caudy, A.A., Hammond, S.M. and Hannon, G.J. (2001) Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature, 409, 363-366. (Pubitemid 32151243)
    • (2001) Nature , vol.409 , Issue.6818 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 34
    • 33845315229 scopus 로고    scopus 로고
    • Editor meets silencer: Crosstalk between RNA editing and RNA interference
    • DOI 10.1038/nrm2061, PII NRM2061
    • Nishikura, K. (2006) Editor meets silencer: crosstalk between RNA editing and RNA interference. Nature Rev., 7, 919-931. (Pubitemid 44871418)
    • (2006) Nature Reviews Molecular Cell Biology , vol.7 , Issue.12 , pp. 919-931
    • Nishikura, K.1
  • 35
    • 0344305774 scopus 로고    scopus 로고
    • Mutations in RNAi Rescue Aberrant Chemotaxis of ADAR Mutants
    • DOI 10.1126/science.1091340
    • Tonkin, L.A. and Bass, B.L. (2003) Mutations in RNAi rescue aberrant chemotaxis of ADAR mutants. Science, 302, 1725. (Pubitemid 37505729)
    • (2003) Science , vol.302 , Issue.5651 , pp. 1725
    • Tonkin, L.A.1    Bass, B.L.2
  • 36
    • 0036810232 scopus 로고    scopus 로고
    • The role of RNA editing by ADARs in RNAi
    • DOI 10.1016/S1097-2765(02)00649-4
    • Knight, S.W. and Bass, B.L. (2002) The role of RNA editing by ADARs in RNAi. Mol. Cell, 10, 809-817. (Pubitemid 35335636)
    • (2002) Molecular Cell , vol.10 , Issue.4 , pp. 809-817
    • Knight, S.W.1    Bass, B.L.2
  • 37
    • 0035542769 scopus 로고    scopus 로고
    • RNAi is antagonized by A-〉I hyper-editing
    • Scadden, A.D. and Smith, C.W. (2001) RNAi is antagonized by A-〉I hyper-editing. EMBO Rep., 2, 1107-1111.
    • (2001) EMBO Rep. , vol.2 , pp. 1107-1111
    • Scadden, A.D.1    Smith, C.W.2
  • 39
    • 57849167057 scopus 로고    scopus 로고
    • A new function for the RNA-editing enzyme ADAR1
    • Iizasa, H. and Nishikura, K. (2009) A new function for the RNA-editing enzyme ADAR1. Nature Immunol., 10, 16-18.
    • (2009) Nature Immunol , vol.10 , pp. 16-18
    • Iizasa, H.1    Nishikura, K.2
  • 40
    • 57849136005 scopus 로고    scopus 로고
    • ADAR1 is essential for the maintenance of hematopoiesis and suppression of interferon signaling
    • Hartner, J.C., Walkley, C.R., Lu, J. and Orkin, S.H. (2009) ADAR1 is essential for the maintenance of hematopoiesis and suppression of interferon signaling. Nature Immunol., 10, 109-115.
    • (2009) Nature Immunol , vol.10 , pp. 109-115
    • Hartner, J.C.1    Walkley, C.R.2    Lu, J.3    Orkin, S.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.