메뉴 건너뛰기




Volumn 6, Issue 2, 2000, Pages 257-269

A phylogenetic analysis reveals an unusual sequence conservation within introns involved in RNA editing

Author keywords

ADAR; Adenosine deaminase; Evolution; Glutamate receptor; Inosine

Indexed keywords

ADENOSINE DEAMINASE; AMINO ACID; DNA; GLUTAMATE RECEPTOR; MESSENGER RNA PRECURSOR; RIBOSOME RNA; TRANSFER RNA;

EID: 0033962272     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838200991921     Document Type: Article
Times cited : (59)

References (30)
  • 2
    • 0030914301 scopus 로고    scopus 로고
    • RNA editing and hypermutation by adenosine deamination
    • Bass BL. 1997. RNA editing and hypermutation by adenosine deamination. Trends Biochem Sci 22:157-162.
    • (1997) Trends Biochem Sci , vol.22 , pp. 157-162
    • Bass, B.L.1
  • 4
    • 0029610443 scopus 로고
    • Early-onset epilepsy and postnatal lethality associated with an editing-deficient GluR-B allele in mice
    • Brusa R, Zimmermann F, Koh DS, Feldmeyer D, Gass P, Seeburg PH, Sprengel R. 1995. Early-onset epilepsy and postnatal lethality associated with an editing-deficient GluR-B allele in mice. Science 270:1677-1680.
    • (1995) Science , vol.270 , pp. 1677-1680
    • Brusa, R.1    Zimmermann, F.2    Koh, D.S.3    Feldmeyer, D.4    Gass, P.5    Seeburg, P.H.6    Sprengel, R.7
  • 6
    • 0027339321 scopus 로고
    • 2+ permeability of unedited and edited versions of the kainate selective glutamate receptor GluR6
    • 2+ permeability of unedited and edited versions of the kainate selective glutamate receptor GluR6. Proc Natl Acad Sci USA 90:755-759.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 755-759
    • Egebjerg, J.1    Heinemann, S.F.2
  • 7
    • 0028261409 scopus 로고
    • Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
    • Gutell RR, Larsen N, Woese CR. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol Rev 58:10-26.
    • (1994) Microbiol Rev , vol.58 , pp. 10-26
    • Gutell, R.R.1    Larsen, N.2    Woese, C.R.3
  • 8
    • 0030722935 scopus 로고    scopus 로고
    • Long human-mouse sequence alignments reveal novel regulatory elements: A reason to sequence the mouse genome
    • Hardison RC, Oeltjen J, Miller W. 1997. Long human-mouse sequence alignments reveal novel regulatory elements: A reason to sequence the mouse genome. Genome Res 7:959-966.
    • (1997) Genome Res , vol.7 , pp. 959-966
    • Hardison, R.C.1    Oeltjen, J.2    Miller, W.3
  • 9
    • 0027772363 scopus 로고
    • RNA editing of AMPA receptor subunit GluR-B: A base-paired intron-exon structure determines position and efficiency
    • Higuchi M, Single FN, Kohler M, Sommer B, Sprengel R, Seeburg PH. 1993. RNA editing of AMPA receptor subunit GluR-B: A base-paired intron-exon structure determines position and efficiency. Cell 75:1361-1370.
    • (1993) Cell , vol.75 , pp. 1361-1370
    • Higuchi, M.1    Single, F.N.2    Kohler, M.3    Sommer, B.4    Sprengel, R.5    Seeburg, P.H.6
  • 11
    • 0028228507 scopus 로고
    • Purification of the Xenopus laevis double-stranded RNA adenosine deaminase
    • Hough RF, Bass BL. 1994. Purification of the Xenopus laevis double-stranded RNA adenosine deaminase. J Biol Chem 269:9933-9939.
    • (1994) J Biol Chem , vol.269 , pp. 9933-9939
    • Hough, R.F.1    Bass, B.L.2
  • 12
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 13
    • 0029164978 scopus 로고
    • Human and rodent DNA sequence comparisons: A mosaic model of genomic evolution
    • Koop BF. 1995. Human and rodent DNA sequence comparisons: A mosaic model of genomic evolution. Trends Genet 11:367-371.
    • (1995) Trends Genet , vol.11 , pp. 367-371
    • Koop, B.F.1
  • 14
    • 0032580152 scopus 로고    scopus 로고
    • A molecular timescale for vertebrate evolution
    • Kumar S, Hedges SB. 1998. A molecular timescale for vertebrate evolution. Nature 392:917-920.
    • (1998) Nature , vol.392 , pp. 917-920
    • Kumar, S.1    Hedges, S.B.2
  • 15
    • 0031732680 scopus 로고    scopus 로고
    • Molecular analysis of AMPA-specific receptors: Subunit composition, editing, and calcium influx determination in small amounts of tissue
    • Lee JC, Greig A, Ravindranathan A, Parks TN, Rao MS. 1998. Molecular analysis of AMPA-specific receptors: Subunit composition, editing, and calcium influx determination in small amounts of tissue. Brain Res Brain Res Protoc 3:142-154.
    • (1998) Brain Res Brain Res Protoc , vol.3 , pp. 142-154
    • Lee, J.C.1    Greig, A.2    Ravindranathan, A.3    Parks, T.N.4    Rao, M.S.5
  • 16
    • 0344035669 scopus 로고    scopus 로고
    • The importance of internal loops within RNA substrates of ADAR1
    • Lehmann K, Bass B. 1999. The importance of internal loops within RNA substrates of ADAR1. J Mol Biol 291:1-13.
    • (1999) J Mol Biol , vol.291 , pp. 1-13
    • Lehmann, K.1    Bass, B.2
  • 18
    • 0025232746 scopus 로고
    • Evolution of large-subunit rRNA structure. The diversification of divergent D3 domain among major phylogenetic groups
    • Michot B, Qu LH, Bachellerie JP. 1990. Evolution of large-subunit rRNA structure. The diversification of divergent D3 domain among major phylogenetic groups. Eur J Biochem 108:219-229.
    • (1990) Eur J Biochem , vol.108 , pp. 219-229
    • Michot, B.1    Qu, L.H.2    Bachellerie, J.P.3
  • 19
    • 0019830772 scopus 로고
    • Secondary structure of 16S ribosomal RNA
    • Noller HF, Woese CR. 1981. Secondary structure of 16S ribosomal RNA. Science 212:403-411.
    • (1981) Science , vol.212 , pp. 403-411
    • Noller, H.F.1    Woese, C.R.2
  • 20
    • 0031194892 scopus 로고    scopus 로고
    • RNA editing: Rewriting receptors
    • O'Connell MA. 1997. RNA editing: Rewriting receptors. Curr Biol 7:R437-R439.
    • (1997) Curr Biol , vol.7
    • O'Connell, M.A.1
  • 21
    • 0001899745 scopus 로고    scopus 로고
    • Probing RNAstructure, function, and history by comparative analysis
    • Gesteland RF, Cech TR, Atkins JF, eds. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press
    • Pace N, Thomas B, Woese C. 1999. Probing RNAstructure, function, and history by comparative analysis. In: Gesteland RF, Cech TR, Atkins JF, eds. The RNA world. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press, pp 113-141.
    • (1999) The RNA World , pp. 113-141
    • Pace, N.1    Thomas, B.2    Woese, C.3
  • 22
    • 0029670855 scopus 로고    scopus 로고
    • cDNA cloning of chick brain alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors reveals conservation of structure, function and post-transcriptional processes with mammalian receptors
    • Paperna T, Lamed Y, Teichberg VI. 1996. cDNA cloning of chick brain alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors reveals conservation of structure, function and post-transcriptional processes with mammalian receptors. Brain Res Mol Brain Res 36:101-113.
    • (1996) Brain Res Mol Brain Res , vol.36 , pp. 101-113
    • Paperna, T.1    Lamed, Y.2    Teichberg, V.I.3
  • 23
    • 0032481315 scopus 로고    scopus 로고
    • Inosine exists in mRNA at tissue-specific levels and is most abundant in brain mRNA
    • Paul MS, Bass BL. 1998. Inosine exists in mRNA at tissue-specific levels and is most abundant in brain mRNA. EMBO J 17:1120-1127.
    • (1998) EMBO J , vol.17 , pp. 1120-1127
    • Paul, M.S.1    Bass, B.L.2
  • 24
    • 0027967784 scopus 로고
    • Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase
    • Poison AG, Bass BL. 1994. Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase. EMBO J 13:5701-5711.
    • (1994) EMBO J , vol.13 , pp. 5701-5711
    • Poison, A.G.1    Bass, B.L.2
  • 25
    • 0029940185 scopus 로고    scopus 로고
    • RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase
    • Poison AG, Bass BL, Casey JL. 1996. RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase. Nature 380: 454-456.
    • (1996) Nature , vol.380 , pp. 454-456
    • Poison, A.G.1    Bass, B.L.2    Casey, J.L.3
  • 26
    • 0016912825 scopus 로고
    • Transfer RNA: Molecular structure, sequence, and properties
    • Rich A, RajBhandary UL. 1976. Transfer RNA: Molecular structure, sequence, and properties. Annu Rev Biochem 45:805-860.
    • (1976) Annu Rev Biochem , vol.45 , pp. 805-860
    • Rich, A.1    RajBhandary, U.L.2
  • 27
    • 0032077722 scopus 로고    scopus 로고
    • RNA editing of brain glutamate receptor channels: Mechanism and physiology
    • Seeburg PH, Higuchi M, Sprengel R. 1998. RNA editing of brain glutamate receptor channels: Mechanism and physiology. Brain Res Rev 26:217-229.
    • (1998) Brain Res Rev , vol.26 , pp. 217-229
    • Seeburg, P.H.1    Higuchi, M.2    Sprengel, R.3
  • 28
    • 0000127073 scopus 로고
    • Sequence-specific recognition of double helical nucleic acids by proteins
    • Seeman NC, Rosenberg JM, Rich A. 1976. Sequence-specific recognition of double helical nucleic acids by proteins. Proc Natl Acad Sci USA 73:804-808.
    • (1976) Proc Natl Acad Sci USA , vol.73 , pp. 804-808
    • Seeman, N.C.1    Rosenberg, J.M.2    Rich, A.3
  • 30
    • 0030894825 scopus 로고    scopus 로고
    • Purification and characterization of a human RNA adenosine deaminase for glutamate receptor B pre-mRNA editing
    • Yang JH, Sklar P, Axel R, Maniatis T. 1997. Purification and characterization of a human RNA adenosine deaminase for glutamate receptor B pre-mRNA editing. Proc Natl Acad Sci USA 94:4354-4359.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 4354-4359
    • Yang, J.H.1    Sklar, P.2    Axel, R.3    Maniatis, T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.