Effects of selective logging on the mating system and pollen dispersal of Hymenaea courbaril L. (Leguminosae) in the Eastern Brazilian Amazon as revealed by microsatellite analysis

Forest Ecology and Management

Volumn 262, Issue 9, 2011, Pages 1758-1765

  Carneiro, F S ^a   Lacerda, A E B ^b   Lemes, M R ^c   Gribel, R ^c   Kanashiro, M ^d   Wadt, L H O ^e   Sebbenn, A M ^f  

^a SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

^b EMBRAPA CERRADOS   (Brazil)

^c INSTITUTO NACIONAL DE PESQUISAS DA AMAZÔNIA   (Brazil)

^d EMBRAPA AMAZÔNIA ORIENTAL   (Brazil)

^e EMBRAPA ACRE   (Brazil)

^f Instituto Florestal de Sao Paulo   (Brazil)

Author keywords

Gene flow; Jatob ; Pollen dispersal; Reduced impact logging; SSR loci; Tropical trees

Indexed keywords

GENE FLOWS; POLLEN DISPERSAL; REDUCED-IMPACT LOGGING; SSR LOCI; TROPICAL TREE;

BIODIVERSITY; DNA SEQUENCES; FORESTRY; GENES; PLANT EXTRACTS; SEED;

POPULATION STATISTICS;

AUTOGAMY; DISPERSAL; EFFECTIVE POPULATION SIZE; EPISODIC EVENT; GENE FLOW; GENETIC MARKER; LEGUME; SELECTIVE LOGGING; TROPICAL FOREST;

BIODIVERSITY; BIOLOGICAL POPULATIONS; BRAZIL; EXTRACTIVES; FORESTRY; GENES; LOGGING; NUCLEIC ACIDS; PLANTS; POLLEN; RIVERS; SEEDS; STATISTICS; TROPICAL ATMOSPHERES;

AMAZONAS [BRAZIL]; BRAZIL;

FABACEAE; HYMENAEA; HYMENAEA COURBARIL;

EID: 80051940699     PISSN: 03781127     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.foreco.2011.07.023     Document Type: Article

References (44)

1. André T., Lemes M.R., Grogan J., Gribel R. Post-logging loss of genetic diversity in a mahogany (Swietenia macrophylla King, Meliaceae) population in Brazilian Amazonia. For. Ecol. Manage. 2008, 255:340-435.
2. Bawa K.S. Breeding systems of tree species of a lowland tropical community. Evolution 1974, 28:85-92.
3. Bittencourt J.M., Sebbenn A.M. Patterns of pollen and seed dispersal in a small fragmented population of a wind pollinated Araucaria angustifolia in southern Brazil. Heredity 2007, 99:580-591. 10.1038/sj.hdy.6801019.
4. Carneiro F.S., Degen B., Kanashiro M., de Lacerda A.E.B., Sebbenn A.M. High levels of pollen dispersal detected through paternity analysis from a continuous Symphonia globulifera population in the Brazilian Amazon. For. Ecol. Manage. 2009, 258:1260-1266.
5. Ciampi A.Y., Gaiotto F., Saganuma E. Desenvolvimento e caracterização de marcadores Microssatélites para Hymenaea courbaril. Genet. Mol. Biol. 2000, 23:216.
6. Cockerham C.C. Variance of gene frequencies. Evolution 1969, 23:72-84.
7. Degen B., Blanc L., Caron H., Maggie L., Kremer A., Gourlet-Fleury S. Impact of selective logging on genetic composition and demographic structure of four tropical tree species. Biol. Conser. 2006, 131:386-401.
8. Dow B.D., Ashley M.V. Microsatellite analysis of seed dispersal and parentage of sampling in bur oak, Quercus macrocarpa. Mol. Ecol. 1996, 5:615-627.
9. Doyle J.J., Doyle J.L. Isolation of plant DNA from fresh tissue. Focus 1990, 12:13-15.
10. Dunphy B.K., Hamrick J.L., Schwagerl J. A comparison of direct and indirect measures of gene flow in the bat-pollinated tree Hymenaea courbaril in the dry forest life zone of south-western Puerto Rico. Int. J. Plant Sci. 2004, 165:427-436.
11. Ferreira, M.E., Grattapaglia, D., 1998. Introdução ao uso de marcadores moleculares em análise genética. EMBRAPA-CENARGEN, Brasília.
12. Fuchs E.J., Lobo J.A., Quesada M. Effects of forest fragmentationion and flowering phenology on the reproductive success and mating patterns of the tropical dry forest tree Pachira quinata. Conser. Biol. 2003, 17:149-157.
13. Gibbs P.E., Oliveira P.E., Bianchi M.B. Postzygotic control of selfing in Hymenaea stigonocarpa (Leguminosae, Caesalpinioideae), a bat-pollinated tree of the Brazilian cerrados. Int. J. Plant Sci. 1999, 160:72-78.
14. Goudet J. Fstat. (Version 2.9.3.2.): a computer program to calculate F-statistics. J. Hered. 1995, 86:485-486.
15. Hanson T.R., Brunsfeld S.J., Finegan B., Waits L.P. Pollen dispersal and genetic structure of the tropical tree Dipteryx panamensis in a fragmented Costa Rican landscape. Mol. Ecol. 2008, 17:2060-2073. 10.1111/j.1365-294X.2008.03726.x.
16. Hardy O., Vekemans X. SPAGeDI: a versatile computer program to analyze spatial genetic structure at the individual or population levels. Mol. Ecol. Notes 2002, 2:618-620. 10.1046/j.1471-8286.2002.00305.x.
17. IBAMA, 2004. Floresta Nacional do Tapajós - plano de manejo. p. 373.
18. Kanashiro M., Thompson I.S., Yared J.A.G., Loveless M.D., Coventry P., Martins-da-Silva R.C.V., Degen B., Amaral W.A. Improving conservation values of managed forest: the Dendrogene Project in the Brazilian Amazon. Unasylva 2002, 209:26-33.
19. Kitamura K., Rahman M.Y.B.A., Ochiai Y., Yoshimaru H. Estimation of the outcrossing Rate on Dryobalanops aromatica Gaertn. F. in Primary and Secondary Forests in Brunei, Borneo, Southeast Asia. Plant Spec. Biol. 1994, 9:37-41. 10.1111/j.1442-1984.1994.tb00080.x.
20. Lacerda A.E.B. Ecological and Genetic Impacts of Reduced-Impact Logging in the Brazilian Amazon forest - the Case of Hymenaea courbaril L. PhD 2007, University of Reading, UK.
21. Lacerda A.E.B., Kanashiro M., Sebbenn A.M. Long-pollen movement and deviation of random mating in a low-density continuous population of Hymenaea courbaril in the Brazilian Amazon. Biotropica 2008, 40:462-470.
22. Lacerda A.E.B., Kanashiro M., Sebbenn A.M. Effects of selective logging on genetic diversity and spatial genetic structure of a Hymenaea courbaril population in the Brazilian Amazon Forest. For. Ecol. Manage. 2008, 255:1034-1043.
23. Latouche-Hallé C., Ramboer A., Bandou E., Caron H., Kremer A. Long-distance pollen flow and tolerance to selfing in a neotropical tree species. Mol. Ecol. 2004, 13:1055-1064.
24. Lee Y.T., Langenheim J.H. A systematic Revision of the genus Hymenaea (Leguminosae; Caesalpinioideae; Detarieae) 1975, vol. 69. University of California Publications in Botany, pp. 1-109.
25. Lemes M.R., Grattapaglia D., Grogan J., Proctor J., Gribel R. Flexible mating system in a logged population of Swietenia macrophylla King (Meliaceae): implications for the management of a threatened neotropical tree species. Plant. Ecol. 2007, 192:169-179.
26. Lobo J., Barrantes G., Castillo M., Quesada R., Maldonado T., Fuchs E.J., Solís S., Quesada M. Effects of selective logging on the abundance, regeneration and short-term survival of Caryocar costaricence (Caryocaceae) and Peltogyne purpurea (Caesalpinaceae), two endemic timber species of southern Central América. For. Ecol. Manage. 2007, 245:88-95.
27. Lourmas M., Kjellberg F., Dessard H., Joly H.I., Chevallier M.-H. Reduced density due to logging and its consequence on mating system and pollen flow in the African mahogany Entandrophragma cylindricum. Heredity 2007, 99:151-160.
28. Marshall T.C., Slate J., Kruuk L.E.B., Pemberton J.M. Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 1998, 7:639-655.
29. Meagher T.R., Thompson E. The relationship between single parents and parent pair genetic likelihoods in genealogy reconstruction. Theor. Pop. Biol. 1986, 29:87-106.
30. Moraes, M.L.T., Sebbenn A.M., 2011. Pollen dispersal between isolated trees in the Brazilian Savannah: A Case Study of the Neotropical Tree Hymenaea stigonocarpa. Biotropica. doi: 10.1111/j.1744-7429.2010.00679.x.
31. Murawski D.A., Hamrick J.L. The effect of the density of flowering individuals on the mating system of the nine tropical tree species. Heredity 1991, 67:167-174.
32. Nielsen R., Tarpy D.R., Reeve H.K. Estimating effective paternity number in social insects and the effective number of alleles in a population. Mol. Ecol. 2003, 12:3157-3164. 10.1046/j.1365-294X.2003.01994.x.
33. Nunney L., Campbell K.A. Assessing minimum viable population size: demography meets population genetics. Trends. Ecol. Evol. 1993, 8:234-239.
34. Obayashi K., Kalasa J., Armesto J.J., Collins S.L. The ecological concept of disturbance and its expression at various hierarchical levels. Inter. J. Plan. Sci. 2002, 163:151-158.
35. Rajora O.P., Pluhar S.A. Genetic diversity impacts of forest fire, forest harvesting, and alternative reforestation practices in black spruce (Picea mariana). Theor. Appl. Genet. 2003, 106:1203-1212.
36. Ritland K. Correlated matings in the partial selfer Mimulus guttatus. Evolution 1989, 43:848-859.
37. Ritland K. 2002. Extensions of models for the estimation of mating systems using n independent loci. Heredity 2002, 88:221-228.
38. Ritland K., Jain S. A model for the estimation of outcrossing rate and gene frequencies using independent loci. Heredity 1981, 47:35-52.
39. Sebbenn A.M. Sistema de reprodução em espécies arbóreas tropicais e suas implicações para a seleção de árvores matrizes para reflorestamentos ambientais. Pomares de Sementes de Espécies Florestais Nativas 2006, 93-138. FUPEF, Curitiba. A.R. Higa, L.D. Silva (Eds.).
40. Sebbenn A.M., Degen B., Azevedo V.C.R., Silva M., Lacerda A.E.B., Ciampi A.Y., Kanashiro M., Carneiro F.S., Tompson I., Loveless M.D. Modelling the long-term impact of selective logging on genetic diversity and demographic structure of four tropical tree species in the Amazon forest. For. Ecol. Manage. 2008, 254:335-349.
41. Silva M.B., Kanashiro M., Ciampi A.Y., Tompson I., Sebbenn A.M. Genetic effects of selective logging and pollen gene flow in a low-density population of the dioecious tropical tree Bagassa guianensis in the Brazilian Amazon. For. Ecol. Manage. 2008, 255:1548-1558. 10.1016/j.foreco.2007.11.012.
42. Sokal R.R., Rohlf F.J. Biometry: principles and practices of statistics in biological research 1995, W.H. Freeman and Company, New York. third ed.
43. Vinson, C.C., 2009. Impact of selective logging on inbreeding and gene flow in two Amazonian timber species with contrasting ecological and reproductive characteristics. PhD. Thesis, University of Oxford, Oxford, p. 172.
44. Wernsdörfer H., Caron H., Gerber S., Cornu G., Rossi V., Mortier F., Gourlet-Fleury S. Relationships between demography and gene flow and their importance for the conservation of tree populations in tropical forests under selective felling regimes. Conser. Genet. 2010, 12:15-29. 10.1007/s10592-009-9983-0.