-
1
-
-
32144432437
-
The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling
-
DOI 10.1093/bioinformatics/bti770
-
Arnold, K., L. Bordoli, J. Kopp, and T. Schwede. 2006. The SWISS-MODEL workspace: A web-based environment for protein structure homology modeling. Bioinformatics 22:195-201. (Pubitemid 43205406)
-
(2006)
Bioinformatics
, vol.22
, Issue.2
, pp. 195-201
-
-
Arnold, K.1
Bordoli, L.2
Kopp, J.3
Schwede, T.4
-
2
-
-
35948972766
-
Role of a qnr-like, gene in the intrinsic resistance of Enterococcus faecalis to fluoroquinolones
-
DOI 10.1128/AAC.00274-07
-
Arsène, S, and R. Leclercq. 2007. Role of a qnr-like gene in the intrinsic resistance of Enterococcus faecalis to fluoroquinolones. Antimicrob. Agents Chemother. 51:3254-3258. (Pubitemid 350067537)
-
(2007)
Antimicrobial Agents and Chemotherapy
, vol.51
, Issue.9
, pp. 3254-3258
-
-
Arsene, S.1
Leclercq, R.2
-
3
-
-
67650465659
-
QMEANclust: Estimation of protein model quality by combining a composite scoring function with structural density information
-
Benkert, P., T. Schwede, and S C E Tosatto. 2009. QMEANclust: Estimation of protein model quality by combining a composite scoring function with structural density information. BMC Struct. Biol. 9:35.
-
(2009)
BMC Struct. Biol.
, vol.9
, pp. 35
-
-
Benkert, P.1
Schwede, T.2
Tosatto, S.C.E.3
-
4
-
-
77954142688
-
Homology modeling and docking study of xanthine oxidase of Arthrobacter sp. XL26
-
Bodade, R G, S D Beedkar, A V Manwar, and C N Khobragade. 2010. Homology modeling and docking study of xanthine oxidase of Arthrobacter sp. XL26. Int. J. Biol. Macromol. 47:298-303.
-
(2010)
Int. J. Biol. Macromol.
, vol.47
, pp. 298-303
-
-
Bodade, R.G.1
Beedkar, S.D.2
Manwar, A.V.3
Khobragade, C.N.4
-
5
-
-
59749091684
-
QnrD, a novel gene conferring transferable quinolone resistance in Salmonella enterica serovar Kentucky and Bovismorbificans strains of human origin
-
Cavaco, L M, H. Hasman, S. Xia, and F M Aarestrup. 2009. qnrD, a novel gene conferring transferable quinolone resistance in Salmonella enterica serovar Kentucky and Bovismorbificans strains of human origin. Antimicrob. Agents Chemother. 53:603-608.
-
(2009)
Antimicrob. Agents Chemother.
, vol.53
, pp. 603-608
-
-
Cavaco, L.M.1
Hasman, H.2
Xia, S.3
Aarestrup, F.M.4
-
7
-
-
12944275537
-
Cloning of a novel gene for quinolone resistance from a transferable plasmid in Shigella flexneri 2b
-
DOI 10.1128/AAC.49.2.801-803.2005
-
Hata, M., et al. 2005. Cloning of a novel gene for quinolone resistance from a transferable plasmid in Shigella flexneri 2b. Antimicrob. Agents Chemother. 49:801-803. (Pubitemid 40175702)
-
(2005)
Antimicrobial Agents and Chemotherapy
, vol.49
, Issue.2
, pp. 801-803
-
-
Hata, M.1
Suzuki, M.2
Matsumoto, M.3
Takahashi, M.4
Sato, K.5
Ibe, S.6
Sakae, K.7
-
8
-
-
78650631542
-
Structural and biochemical analysis of the pentapeptide repeat protein EfsQnr, a potent DNA gyrase inhibitor
-
Hegde, S S, M W Vetting, L A Mitchenall, A. Maxwell, and J S Blanchard. 2011. Structural and biochemical analysis of the pentapeptide repeat protein EfsQnr, a potent DNA gyrase inhibitor. Antimicrob. Agents Chemother. 55:110-117.
-
(2011)
Antimicrob. Agents Chemother.
, vol.55
, pp. 110-117
-
-
Hegde, S.S.1
Vetting, M.W.2
Mitchenall, L.A.3
Maxwell, A.4
Blanchard, J.S.5
-
9
-
-
33645752522
-
QnrB, another plasmid-mediated gene for quinolone resistance
-
Jacoby, G A, et al. 2006. qnrB, another plasmid-mediated gene for quinolone resistance. Antimicrob. Agents Chemother. 50:1178-1182.
-
(2006)
Antimicrob. Agents Chemother.
, vol.50
, pp. 1178-1182
-
-
Jacoby, G.A.1
-
11
-
-
76749157808
-
Homology modeling of phosphoryl thymidine kinase of enterohemorrhagic Escherichia coil OH: 157
-
Kaistha, S D, and R. Sinha. 2009. Homology modeling of phosphoryl thymidine kinase of enterohemorrhagic Escherichia coil OH: 157. Bioinformation 3:240-243.
-
(2009)
Bioinformation
, vol.3
, pp. 240-243
-
-
Kaistha, S.D.1
Sinha, R.2
-
12
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski, R A, M W MacArthur, D. Moss, and J M Thornton. 1993. PROCHECK: A program to check the stereochemical quality of protein structures. J. Appl. Cryst. 26:283-291.
-
(1993)
J. Appl. Cryst.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.3
Thornton, J.M.4
-
13
-
-
0032515790
-
Quinolone resistance from a transferable plasmid
-
DOI 10.1016/S0140-6736(97)07322-4
-
Martínez-Martínez, L., A. Pascual, and G A Jacoby. 1998. Quinolone resistance from a transferable plasmid. Lancet 351:797-799. (Pubitemid 28112342)
-
(1998)
Lancet
, vol.351
, Issue.9105
, pp. 797-799
-
-
Martinez-Martinez, L.1
Pascual, A.2
Jacoby, G.A.3
-
14
-
-
0032540222
-
Assessing protein structures with a non-local atomic interaction energy
-
DOI 10.1006/jmbi.1998.1665
-
Melo, F, and E. Feytmans. 1998. Assessing protein structures with a nonlocal atomic interaction energy. J. Mol. Biol. 277:1141-1152. (Pubitemid 28190852)
-
(1998)
Journal of Molecular Biology
, vol.277
, Issue.5
, pp. 1141-1152
-
-
Melo, F.1
Feytmans, E.2
-
15
-
-
29444442953
-
Vibrionaceae as a possible source of Qnr-like quinolone resistance determinants
-
DOI 10.1093/jac/dki371
-
Poirel, L., A A Liard, J M Rodríguez-Martínez, and P. Nordmann. 2005. Vibrionaceae as a possible source of Qnr-like quinolone resistance determinants. J. Antimicrob. Chemother. 56:1118-1121. (Pubitemid 43009831)
-
(2005)
Journal of Antimicrobial Chemotherapy
, vol.56
, Issue.6
, pp. 1118-1121
-
-
Poirel, L.1
Liard, A.2
Rodriguez-Martinez, J.-M.3
Nordmann, P.4
-
16
-
-
65749112554
-
Mutational analysis of quinolone resistance in the plasmid-encoded pentapeptide repeat proteins QnrA, QnrB and QnrS
-
Rodríguez-Martínez, J M, et al. 2009. Mutational analysis of quinolone resistance in the plasmid-encoded pentapeptide repeat proteins QnrA, QnrB and QnrS. J. Antimicrob. Chemother. 63:1128-1134.
-
(2009)
J. Antimicrob. Chemother.
, vol.63
, pp. 1128-1134
-
-
Rodríguez-Martínez, J.M.1
-
17
-
-
44449159307
-
Qnr-like pentapeptide repeat proteins in Gram-positive bacteria
-
DOI 10.1093/jac/dkn115
-
Rodríguez-Martínez, J M, et al. 2008. Qnr-like pentapeptide repeat proteins in Gram-positive bacteria. J. Antimicrob. Chemother. 61:1240-1243. (Pubitemid 351753588)
-
(2008)
Journal of Antimicrobial Chemotherapy
, vol.61
, Issue.6
, pp. 1240-1243
-
-
Rodriguez-Martinez, J.M.1
Velasco, C.2
Briales, A.3
Garcia, I.4
Conejo, M.C.5
Pascual, A.6
-
18
-
-
0028871814
-
Evaluation of comparative protein modeling by MODELLER
-
Sali, A., L. Potterton, F. Yuan, H. Van Vlijmen, and M. Karplus. 1995. Evaluation of comparative protein modeling by MODELLER. Proteins 23:318-326.
-
(1995)
Proteins
, vol.23
, pp. 318-326
-
-
Sali, A.1
Potterton, L.2
Yuan, F.3
Van Vlijmen, H.4
Karplus, M.5
-
19
-
-
52949122901
-
Predictive analysis of transmissible quinolone resistance indicates Stenotrophomonas maltophilia as a potential source of a novel family of Qnr determinants
-
Sanchez, M B, A. Hernandez, J M Rodríguez-Martínez, L. Martínez-Martínez, and J L Martínez. 2008. Predictive analysis of transmissible quinolone resistance indicates Stenotrophomonas maltophilia as a potential source of a novel family of Qnr determinants. BMC Microbiol. 8:148.
-
(2008)
BMC Microbiol.
, vol.8
, pp. 148
-
-
Sanchez, M.B.1
Hernandez, A.2
Rodríguez-Martínez, J.M.3
Martínez-Martínez, L.4
Martínez, J.L.5
-
20
-
-
78249252070
-
A novel family (QnrAS) of plasmid-mediated quinolone resistance determinant
-
Sun, H I, et al. 2010. A novel family (QnrAS) of plasmid-mediated quinolone resistance determinant. Int. J. Antimicrob. Agents. 36:578-579.
-
(2010)
Int. J. Antimicrob. Agents.
, vol.36
, pp. 578-579
-
-
Sun, H.I.1
-
22
-
-
21444434094
-
Interaction of the plasmid-encoded quinolone resistance protein QnrA with Escherichia coli topoisomerase IV
-
DOI 10.1128/AAC.49.7.3050-3052.2005
-
Tran, J H, G A Jacoby, and D C Hooper. 2005. Interaction of the plasmid-encoded quinolone resistance protein QnrA with Escherichia coil topoisomerase IV. Antimicrob. Agents Chemother. 49:3050-3052. (Pubitemid 40917639)
-
(2005)
Antimicrobial Agents and Chemotherapy
, vol.49
, Issue.7
, pp. 3050-3052
-
-
Tran, J.H.1
Jacoby, G.A.2
Hooper, D.C.3
-
24
-
-
30144433013
-
Pentapeptide repeat proteins
-
DOI 10.1021/bi052130w
-
Vetting, M W, et al. 2006. Pentapeptide repeat proteins. Biochemistry 45:1-10. (Pubitemid 43054077)
-
(2006)
Biochemistry
, vol.45
, Issue.1
, pp. 1-10
-
-
Vetting, M.W.1
Hegde, S.S.2
Fajardo, J.E.3
Fiser, A.4
Roderick, S.L.5
Takiff, H.E.6
Blanchard, J.S.7
-
25
-
-
66149096176
-
New plasmid-mediated quinolone resistance gene, qnrC, found in a clinical isolate of Proteus mirabilis
-
Wang, M., et al. 2009. New plasmid-mediated quinolone resistance gene, qnrC, found in a clinical isolate of Proteus mirabilis. Antimicrob. Agents Chemother. 53:1892-1897.
-
(2009)
Antimicrob. Agents Chemother.
, vol.53
, pp. 1892-1897
-
-
Wang, M.1
-
26
-
-
79956033121
-
Structural insights into quinolone antibiotic resistance mediated by pentapeptide repeat proteins: Conserved surface loops direct the activity of a Qnr protein from a Gram-negative bacterium
-
Xiong, X., E H Bromley, P. Oelschlaeger, D N Woolfson, and J. Spencer. 2011. Structural insights into quinolone antibiotic resistance mediated by pentapeptide repeat proteins: Conserved surface loops direct the activity of a Qnr protein from a Gram-negative bacterium. Nucleic Acids Res. 39:3917-3927.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 3917-3927
-
-
Xiong, X.1
Bromley, E.H.2
Oelschlaeger, P.3
Woolfson, D.N.4
Spencer, J.5
-
27
-
-
0036838311
-
Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction
-
DOI 10.1110/ps.0217002
-
Zhou, H, and Y. Zhou. 2002. Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction. Protein Sci. 11:2714-2726. (Pubitemid 35191145)
-
(2002)
Protein Science
, vol.11
, Issue.11
, pp. 2714-2726
-
-
Zhou, H.1
Zhou, Y.2
|