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Volumn 12, Issue , 2011, Pages

Immunome database for marsupials and monotremes

Author keywords

[No Author keywords available]

Indexed keywords

CATHELICIDIN; CYTOKINE; DEFENSIN; PROTEIN;

EID: 80051785507     PISSN: None     EISSN: 14712172     Source Type: Journal    
DOI: 10.1186/1471-2172-12-48     Document Type: Article
Times cited : (23)

References (57)
  • 7
    • 33847254940 scopus 로고    scopus 로고
    • In silico identification of opossum cytokine genes suggests the complexity of the marsupial immune system rivals that of eutherian mammals
    • 10.1186/1745-7580-2-4, 1660534, 17094811
    • Wong E, Young L, Papenfuss A, Belov K. In silico identification of opossum cytokine genes suggests the complexity of the marsupial immune system rivals that of eutherian mammals. Immunome Research 2006, 2(1):4-4. 10.1186/1745-7580-2-4, 1660534, 17094811.
    • (2006) Immunome Research , vol.2 , Issue.1 , pp. 4-4
    • Wong, E.1    Young, L.2    Papenfuss, A.3    Belov, K.4
  • 9
    • 34248594184 scopus 로고    scopus 로고
    • Characterization of the opossum immune genome provides insights into the evolution of the mammalian immune system
    • 10.1101/gr.6121807, 1899125, 17495011
    • Belov K, Sanderson CE, Deakin JE, Wong ES, Assange D, McColl KA, Gout A, de Bono B, Barrow AD, Speed TP, et al. Characterization of the opossum immune genome provides insights into the evolution of the mammalian immune system. Genome Res 2007, 17(7):982-991. 10.1101/gr.6121807, 1899125, 17495011.
    • (2007) Genome Res , vol.17 , Issue.7 , pp. 982-991
    • Belov, K.1    Sanderson, C.E.2    Deakin, J.E.3    Wong, E.S.4    Assange, D.5    McColl, K.A.6    Gout, A.7    de Bono, B.8    Barrow, A.D.9    Speed, T.P.10
  • 10
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • 10.1093/nar/25.17.3389, 146917, 9254694
    • Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25(17):3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
    • (1997) Nucleic Acids Res , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 12
    • 68349158919 scopus 로고    scopus 로고
    • Identification of natural killer cell receptor clusters in the platypus genome reveals an expansion of C-type lectin genes
    • 10.1007/s00251-009-0386-7, 19597809
    • Wong ES, Sanderson CE, Deakin JE, Whittington CM, Papenfuss AT, Belov K. Identification of natural killer cell receptor clusters in the platypus genome reveals an expansion of C-type lectin genes. Immunogenetics 2009, 61(8):565-579. 10.1007/s00251-009-0386-7, 19597809.
    • (2009) Immunogenetics , vol.61 , Issue.8 , pp. 565-579
    • Wong, E.S.1    Sanderson, C.E.2    Deakin, J.E.3    Whittington, C.M.4    Papenfuss, A.T.5    Belov, K.6
  • 14
    • 0141993603 scopus 로고    scopus 로고
    • Evolution of the major histocompatibility complex: Isolation of class II beta cDNAs from two monotremes, the platypus and the short-beaked echidna
    • 10.1007/s00251-003-0598-1, 12942212
    • Belov K, Lam MKP, Hellman L, Colgan DJ. Evolution of the major histocompatibility complex: Isolation of class II beta cDNAs from two monotremes, the platypus and the short-beaked echidna. Immunogenetics 2003, 55(6):402-411. 10.1007/s00251-003-0598-1, 12942212.
    • (2003) Immunogenetics , vol.55 , Issue.6 , pp. 402-411
    • Belov, K.1    Lam, M.K.P.2    Hellman, L.3    Colgan, D.J.4
  • 15
    • 34047213024 scopus 로고    scopus 로고
    • Evolution of mammalian CD1: marsupial CD1 is not orthologous to the eutherian isoforms and is a pseudogene in the opossum Monodelphis domestica
    • 10.1111/j.1365-2567.2007.02545.x, 2265927, 17244156
    • Baker ML, Miller RD. Evolution of mammalian CD1: marsupial CD1 is not orthologous to the eutherian isoforms and is a pseudogene in the opossum Monodelphis domestica. Immunology 2007, 121(1):113-121. 10.1111/j.1365-2567.2007.02545.x, 2265927, 17244156.
    • (2007) Immunology , vol.121 , Issue.1 , pp. 113-121
    • Baker, M.L.1    Miller, R.D.2
  • 16
    • 27644540607 scopus 로고    scopus 로고
    • High variability in complementarity-determining regions compensates for a low number of V gene families in the lambda light chain locus of the platypus
    • 10.1002/eji.200425574, 16143985
    • Johansson J, Salazar JN, Aveskogh M, Munday B, Miller RD, Hellman L. High variability in complementarity-determining regions compensates for a low number of V gene families in the lambda light chain locus of the platypus. European Journal of Immunology 2005, 35(10):3008-3019. 10.1002/eji.200425574, 16143985.
    • (2005) European Journal of Immunology , vol.35 , Issue.10 , pp. 3008-3019
    • Johansson, J.1    Salazar, J.N.2    Aveskogh, M.3    Munday, B.4    Miller, R.D.5    Hellman, L.6
  • 17
    • 10944270616 scopus 로고    scopus 로고
    • The complexity of expressed kappa light chains in egg-laying mammals
    • 10.1007/s00251-004-0720-z, 15448942
    • Nowak MA, Parra ZE, Hellman L, Miller RD. The complexity of expressed kappa light chains in egg-laying mammals. Immunogenetics 2004, 56(8):555-563. 10.1007/s00251-004-0720-z, 15448942.
    • (2004) Immunogenetics , vol.56 , Issue.8 , pp. 555-563
    • Nowak, M.A.1    Parra, Z.E.2    Hellman, L.3    Miller, R.D.4
  • 18
    • 0037365250 scopus 로고    scopus 로고
    • Characterization of beta(2)-microglobulin coding sequence from three non-placental mammals: the duckbill platypus, the short-beaked echidna, and the grey short-tailed opossum
    • 10.1016/S0145-305X(02)00095-2, 12590975
    • Miska KB, Hellman L, Miller RD. Characterization of beta(2)-microglobulin coding sequence from three non-placental mammals: the duckbill platypus, the short-beaked echidna, and the grey short-tailed opossum. Developmental and Comparative Immunology 2003, 27(3):247-256. 10.1016/S0145-305X(02)00095-2, 12590975.
    • (2003) Developmental and Comparative Immunology , vol.27 , Issue.3 , pp. 247-256
    • Miska, K.B.1    Hellman, L.2    Miller, R.D.3
  • 19
    • 0036379191 scopus 로고    scopus 로고
    • The major histocompatibility complex in monotremes: an analysis of the evolution of Mhc class I genes across all three mammalian subclasses
    • 10.1007/s00251-002-0484-2, 12242589
    • Miska KB, Harrison GA, Hellman L, Miller RD. The major histocompatibility complex in monotremes: an analysis of the evolution of Mhc class I genes across all three mammalian subclasses. Immunogenetics 2002, 54(6):381-393. 10.1007/s00251-002-0484-2, 12242589.
    • (2002) Immunogenetics , vol.54 , Issue.6 , pp. 381-393
    • Miska, K.B.1    Harrison, G.A.2    Hellman, L.3    Miller, R.D.4
  • 21
    • 0034778192 scopus 로고    scopus 로고
    • Molecular characterisation of the tammar wallaby (Macropus eugenii) CD3 epsilon chain cDNA
    • 10.1016/S0161-5890(01)00072-4, 11684291
    • Old JM, Deane EM, Harrison GA. Molecular characterisation of the tammar wallaby (Macropus eugenii) CD3 epsilon chain cDNA. Molecular Immunology 2001, 38(5):359-364. 10.1016/S0161-5890(01)00072-4, 11684291.
    • (2001) Molecular Immunology , vol.38 , Issue.5 , pp. 359-364
    • Old, J.M.1    Deane, E.M.2    Harrison, G.A.3
  • 23
    • 2342665492 scopus 로고    scopus 로고
    • Interferon alpha/beta genes from a marsupial, Macropus eugenii
    • 10.1016/j.dci.2004.02.002, 15183033
    • Harrison GA, McNicol KA, Deane EM. Interferon alpha/beta genes from a marsupial, Macropus eugenii. Developmental and Comparative Immunology 2004, 28(9):927-940. 10.1016/j.dci.2004.02.002, 15183033.
    • (2004) Developmental and Comparative Immunology , vol.28 , Issue.9 , pp. 927-940
    • Harrison, G.A.1    McNicol, K.A.2    Deane, E.M.3
  • 25
    • 0032922450 scopus 로고    scopus 로고
    • Conservation of 3' untranslated region elements in tammar wallaby (Macropus eugenii) TNF-alpha mRNA
    • 10.1007/s002510050521, 10199924
    • Harrison GA, Broughton MJ, Young LJ, Cooper DW, Deane EM. Conservation of 3' untranslated region elements in tammar wallaby (Macropus eugenii) TNF-alpha mRNA. Immunogenetics 1999, 49(5):464-467. 10.1007/s002510050521, 10199924.
    • (1999) Immunogenetics , vol.49 , Issue.5 , pp. 464-467
    • Harrison, G.A.1    Broughton, M.J.2    Young, L.J.3    Cooper, D.W.4    Deane, E.M.5
  • 27
    • 0033104326 scopus 로고    scopus 로고
    • Molecular cloning and physiological effects of brushtail possum interleukin-1beta
    • 10.1016/S0165-2427(99)00004-5, 10206203
    • Wedlock DN, Goh LP, Parlane NA, Buddle BM. Molecular cloning and physiological effects of brushtail possum interleukin-1beta. Veterinary Immunology and Immunopathology 1999, 67(4):359-372. 10.1016/S0165-2427(99)00004-5, 10206203.
    • (1999) Veterinary Immunology and Immunopathology , vol.67 , Issue.4 , pp. 359-372
    • Wedlock, D.N.1    Goh, L.P.2    Parlane, N.A.3    Buddle, B.M.4
  • 28
    • 0029884134 scopus 로고    scopus 로고
    • Molecular cloning and characterization of tumor necrosis factor alpha (TNF-alpha) from the Australian common brushtail possum, Trichosurus vulpecula
    • 10.1038/icb.1996.20, 8724002
    • Wedlock DN, Aldwell FE, Buddle BM. Molecular cloning and characterization of tumor necrosis factor alpha (TNF-alpha) from the Australian common brushtail possum, Trichosurus vulpecula. Immunology and Cell Biology 1996, 74(2):151-158. 10.1038/icb.1996.20, 8724002.
    • (1996) Immunology and Cell Biology , vol.74 , Issue.2 , pp. 151-158
    • Wedlock, D.N.1    Aldwell, F.E.2    Buddle, B.M.3
  • 29
    • 0033968026 scopus 로고    scopus 로고
    • CDNA cloning, characterization, expression and recombinant protein production of leukemia inhibitory factor (LIF) from the marsupial, the brushtail possum (Trichosurus vulpecula)
    • 10.1016/S0378-1119(99)00513-2, 10675625
    • Cui S, Selwood L. cDNA cloning, characterization, expression and recombinant protein production of leukemia inhibitory factor (LIF) from the marsupial, the brushtail possum (Trichosurus vulpecula). Gene 2000, 243(1-2):167-178. 10.1016/S0378-1119(99)00513-2, 10675625.
    • (2000) Gene , vol.243 , Issue.1-2 , pp. 167-178
    • Cui, S.1    Selwood, L.2
  • 30
    • 0041328963 scopus 로고    scopus 로고
    • Cloning of IgE from the echidna (Tachyglossus aculeatus) and a comparative analysis of epsilon chains from all three extant mammalian lineages
    • 10.1016/S0145-305X(03)00084-3, 12962983
    • Vernersson M, Aveskogh M, Hellman L. Cloning of IgE from the echidna (Tachyglossus aculeatus) and a comparative analysis of epsilon chains from all three extant mammalian lineages. Developmental and Comparative Immunology 2004, 28(1):61-75. 10.1016/S0145-305X(03)00084-3, 12962983.
    • (2004) Developmental and Comparative Immunology , vol.28 , Issue.1 , pp. 61-75
    • Vernersson, M.1    Aveskogh, M.2    Hellman, L.3
  • 31
    • 33645890593 scopus 로고    scopus 로고
    • TCR gamma chain diversity in the spleen of the duckbill platypus (Ornithorhynchus anatinus)
    • 10.1016/j.dci.2005.10.002, 16303181
    • Parra ZE, Arnold T, Nowak MA, Hellman L, Miller RD. TCR gamma chain diversity in the spleen of the duckbill platypus (Ornithorhynchus anatinus). Developmental and Comparative Immunology 2006, 30(8):699-710. 10.1016/j.dci.2005.10.002, 16303181.
    • (2006) Developmental and Comparative Immunology , vol.30 , Issue.8 , pp. 699-710
    • Parra, Z.E.1    Arnold, T.2    Nowak, M.A.3    Hellman, L.4    Miller, R.D.5
  • 33
    • 0038105552 scopus 로고    scopus 로고
    • Primary structure and variation of the T-cell receptor delta-chain from a marsupial, Macropus eugenii
    • 10.1016/S0165-2478(03)00072-5, 12880681
    • Harrison GA, Taylor CL, Miller RD, Deane EM. Primary structure and variation of the T-cell receptor delta-chain from a marsupial, Macropus eugenii. Immunology Letters 2003, 88(2):117-125. 10.1016/S0165-2478(03)00072-5, 12880681.
    • (2003) Immunology Letters , vol.88 , Issue.2 , pp. 117-125
    • Harrison, G.A.1    Taylor, C.L.2    Miller, R.D.3    Deane, E.M.4
  • 35
    • 62549090544 scopus 로고    scopus 로고
    • The marsupial CD8 gene locus: molecular cloning and expression analysis of the alpha and beta sequences in the gray short-tailed opossum (Monodelphis domestica) and the tammar wallaby (Macropus eugenii)
    • 10.1016/j.vetimm.2008.12.003, 19135263
    • Duncan LG, Nair SV, Deane EM. The marsupial CD8 gene locus: molecular cloning and expression analysis of the alpha and beta sequences in the gray short-tailed opossum (Monodelphis domestica) and the tammar wallaby (Macropus eugenii). Veterinary Immunology and Immunopathology 2009, 129(1-2):14-27. 10.1016/j.vetimm.2008.12.003, 19135263.
    • (2009) Veterinary Immunology and Immunopathology , vol.129 , Issue.1-2 , pp. 14-27
    • Duncan, L.G.1    Nair, S.V.2    Deane, E.M.3
  • 36
    • 33744829018 scopus 로고    scopus 로고
    • Isolation of major histocompatibility complex Class I genes from the tammar wallaby (Macropus eugenii)
    • 10.1007/s00251-006-0107-4, 16568263
    • Siddle HV, Deakin JE, Baker ML, Miller RD, Belov K. Isolation of major histocompatibility complex Class I genes from the tammar wallaby (Macropus eugenii). Immunogenetics 2006, 58(5-6):487-493. 10.1007/s00251-006-0107-4, 16568263.
    • (2006) Immunogenetics , vol.58 , Issue.5-6 , pp. 487-493
    • Siddle, H.V.1    Deakin, J.E.2    Baker, M.L.3    Miller, R.D.4    Belov, K.5
  • 37
    • 35449006702 scopus 로고    scopus 로고
    • Analysis of the expression of immunoglobulins throughout lactation suggests two periods of immune transfer in the tammar wallaby (Macropus eugenii)
    • 10.1016/j.vetimm.2007.07.008, 17727962
    • Daly KA, Digby M, Lefèvre C, Mailer S, Thomson P, Nicholas K, Williamson P. Analysis of the expression of immunoglobulins throughout lactation suggests two periods of immune transfer in the tammar wallaby (Macropus eugenii). Veterinary Immunology and Immunopathology 2007, 120(3-4):187-200. 10.1016/j.vetimm.2007.07.008, 17727962.
    • (2007) Veterinary Immunology and Immunopathology , vol.120 , Issue.3-4 , pp. 187-200
    • Daly, K.A.1    Digby, M.2    Lefèvre, C.3    Mailer, S.4    Thomson, P.5    Nicholas, K.6    Williamson, P.7
  • 39
    • 68249162079 scopus 로고    scopus 로고
    • Evolution of the opossum major histocompatibility complex: evidence for diverse alternative splice patterns and low polymorphism among class I genes
    • 2753908, 19191910, e418-431
    • Baker ML, Melman SD, Huntley J, Miller RD. Evolution of the opossum major histocompatibility complex: evidence for diverse alternative splice patterns and low polymorphism among class I genes. Immunology 2009, 128(1 Suppl):e418-431-e418-431. 2753908, 19191910.
    • (2009) Immunology , vol.128 , Issue.1 SUPPL
    • Baker, M.L.1    Melman, S.D.2    Huntley, J.3    Miller, R.D.4
  • 40
    • 0034237113 scopus 로고    scopus 로고
    • Immunological protection of the vulnerable marsupial pouch young: two periods of immune transfer during lactation in Trichosurus vulpecula (brushtail possum)
    • 10.1016/S0145-305X(00)00012-4, 10785274
    • Adamski FM, Demmer J. Immunological protection of the vulnerable marsupial pouch young: two periods of immune transfer during lactation in Trichosurus vulpecula (brushtail possum). Developmental and Comparative Immunology 2000, 24(5):491-502. 10.1016/S0145-305X(00)00012-4, 10785274.
    • (2000) Developmental and Comparative Immunology , vol.24 , Issue.5 , pp. 491-502
    • Adamski, F.M.1    Demmer, J.2
  • 41
    • 72949113843 scopus 로고    scopus 로고
    • Cloning and structural analysis of two highly divergent IgA isotypes, IgA1 and IgA2 from the duck billed platypus, Ornithorhynchus anatinus
    • 10.1016/j.molimm.2009.10.007, 19913303
    • Vernersson M, Belov K, Aveskogh M, Hellman L. Cloning and structural analysis of two highly divergent IgA isotypes, IgA1 and IgA2 from the duck billed platypus, Ornithorhynchus anatinus. Molecular Immunology 2010, 47(4):785-791. 10.1016/j.molimm.2009.10.007, 19913303.
    • (2010) Molecular Immunology , vol.47 , Issue.4 , pp. 785-791
    • Vernersson, M.1    Belov, K.2    Aveskogh, M.3    Hellman, L.4
  • 42
    • 0025949734 scopus 로고
    • MHC class II genes of a marsupial, the red-necked wallaby (Macropus rufogriseus): identification of new gene families
    • Schneider S, Vincek V, Tichy H, Figueroa F, Klein J. MHC class II genes of a marsupial, the red-necked wallaby (Macropus rufogriseus): identification of new gene families. Molecular Biology and Evolution 1991, 8(6):753-766.
    • (1991) Molecular Biology and Evolution , vol.8 , Issue.6 , pp. 753-766
    • Schneider, S.1    Vincek, V.2    Tichy, H.3    Figueroa, F.4    Klein, J.5
  • 44
    • 0032534688 scopus 로고    scopus 로고
    • Marsupial light chains: complexity and conservation of lambda in the opossum Monodelphis domestica
    • Lucero JE, Rosenberg GH, Miller RD. Marsupial light chains: complexity and conservation of lambda in the opossum Monodelphis domestica. Journal of Immunology (Baltimore, Md: 1950) 1998, 161(12):6724-6732.
    • (1998) Journal of Immunology (Baltimore, Md: 1950) , vol.161 , Issue.12 , pp. 6724-6732
    • Lucero, J.E.1    Rosenberg, G.H.2    Miller, R.D.3
  • 45
    • 34249282383 scopus 로고    scopus 로고
    • Molecular characterisation and expression of CD4 in two distantly related marsupials: the gray short-tailed opossum (Monodelphis domestica) and tammar wallaby (Macropus eugenii)
    • 10.1016/j.molimm.2007.04.013, 17521733
    • Duncan LG, Nair SV, Deane EM. Molecular characterisation and expression of CD4 in two distantly related marsupials: the gray short-tailed opossum (Monodelphis domestica) and tammar wallaby (Macropus eugenii). Molecular Immunology 2007, 44(15):3641-3652. 10.1016/j.molimm.2007.04.013, 17521733.
    • (2007) Molecular Immunology , vol.44 , Issue.15 , pp. 3641-3652
    • Duncan, L.G.1    Nair, S.V.2    Deane, E.M.3
  • 47
    • 80052814135 scopus 로고    scopus 로고
    • Django
    • Django. , http://www.djangoproject.com/
  • 48
    • 80052808612 scopus 로고    scopus 로고
    • SQLite
    • SQLite. , http://sqlite.org/
  • 49
    • 0036087630 scopus 로고    scopus 로고
    • CDD: a database of conserved domain alignments with links to domain three-dimensional structure
    • 10.1093/nar/30.1.281, 99109, 11752315
    • Marchler-Bauer A, Panchenko AR, Shoemaker BA, Thiessen PA, Geer LY, Bryant SH. CDD: a database of conserved domain alignments with links to domain three-dimensional structure. Nucleic Acids Res 2002, 30(1):281-283. 10.1093/nar/30.1.281, 99109, 11752315.
    • (2002) Nucleic Acids Res , vol.30 , Issue.1 , pp. 281-283
    • Marchler-Bauer, A.1    Panchenko, A.R.2    Shoemaker, B.A.3    Thiessen, P.A.4    Geer, L.Y.5    Bryant, S.H.6
  • 50
    • 0032841938 scopus 로고    scopus 로고
    • Marsupial Mhc class I: classical sequences from the opossum, Monodelphis domestica
    • 10.1007/s002510050692, 10541813
    • Miska KB, Miller RD. Marsupial Mhc class I: classical sequences from the opossum, Monodelphis domestica. Immunogenetics 1999, 50(1-2):89-93. 10.1007/s002510050692, 10541813.
    • (1999) Immunogenetics , vol.50 , Issue.1-2 , pp. 89-93
    • Miska, K.B.1    Miller, R.D.2
  • 51
    • 15244344858 scopus 로고    scopus 로고
    • IRIS: a database surveying known human immune system genes
    • 10.1016/j.ygeno.2005.01.009, 15780753
    • Kelley J, de Bono B, Trowsdale J. IRIS: a database surveying known human immune system genes. Genomics 2005, 85(4):503-511. 10.1016/j.ygeno.2005.01.009, 15780753.
    • (2005) Genomics , vol.85 , Issue.4 , pp. 503-511
    • Kelley, J.1    de Bono, B.2    Trowsdale, J.3
  • 52
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • 10.1093/bioinformatics/14.9.755, 9918945
    • Eddy SR. Profile hidden Markov models. Bioinformatics 1998, 14(9):755-763. 10.1093/bioinformatics/14.9.755, 9918945.
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 755-763
    • Eddy, S.R.1
  • 54
    • 84870490179 scopus 로고    scopus 로고
    • National Center for Biotechnology Information (NCBI)
    • National Center for Biotechnology Information (NCBI). , http://www.ncbi.nlm.nih.gov/
  • 55
    • 84874647456 scopus 로고    scopus 로고
    • HUGO Gene Nomenclature Committee
    • HUGO Gene Nomenclature Committee. , http://www.genenames.org/


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.