-
1
-
-
67849106093
-
Grasping at shadows: revealing the elusive nature of essential genes
-
Msadek T, (2009) Grasping at shadows: revealing the elusive nature of essential genes. J Bacteriol 191: 4701-4704.
-
(2009)
J Bacteriol
, vol.191
, pp. 4701-4704
-
-
Msadek, T.1
-
2
-
-
67749135367
-
Conserved network of proteins essential for bacterial viability
-
Handford JI, Ize B, Buchanan G, Butland GP, Greenblatt J, et al. (2009) Conserved network of proteins essential for bacterial viability. J Bacteriol 191: 4732-4749.
-
(2009)
J Bacteriol
, vol.191
, pp. 4732-4749
-
-
Handford, J.I.1
Ize, B.2
Buchanan, G.3
Butland, G.P.4
Greenblatt, J.5
-
3
-
-
31544454747
-
Resuscitation of the viable but nonculturable state of Salmonella enterica serovar Oranienburg by recombinant resuscitation-promoting factor derived from Salmonella typhimurium strain LT2
-
Panutdaporn N, Kawamoto K, Asakura H, Makino SI, (2006) Resuscitation of the viable but nonculturable state of Salmonella enterica serovar Oranienburg by recombinant resuscitation-promoting factor derived from Salmonella typhimurium strain LT2. Int J Food Microbiol 106: 241-247.
-
(2006)
Int J Food Microbiol
, vol.106
, pp. 241-247
-
-
Panutdaporn, N.1
Kawamoto, K.2
Asakura, H.3
Makino, S.I.4
-
4
-
-
15944387317
-
The viable but nonculturable state in bacteria
-
Oliver JD, (2005) The viable but nonculturable state in bacteria. J Microbiol 43: 93-100.
-
(2005)
J Microbiol
, vol.43
, pp. 93-100
-
-
Oliver, J.D.1
-
5
-
-
77953206132
-
Recent findings on the viable but non culturable state in pathogenic bacteria
-
Oliver JD, (2010) Recent findings on the viable but non culturable state in pathogenic bacteria. FEMS Microbiol Rev 34: 415-425.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 415-425
-
-
Oliver, J.D.1
-
6
-
-
33744771516
-
Preliminary crystallographic analysis of the Escherichia coli YeaZ protein using the anomalous signal of a gadolinium derivative
-
Jeudy S, Stelter M, Coutard B, Kahn R, Abergel C, (2005) Preliminary crystallographic analysis of the Escherichia coli YeaZ protein using the anomalous signal of a gadolinium derivative. Acta Cryst F61: 848-851.
-
(2005)
Acta Cryst
, vol.F61
, pp. 848-851
-
-
Jeudy, S.1
Stelter, M.2
Coutard, B.3
Kahn, R.4
Abergel, C.5
-
7
-
-
77958054854
-
Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution
-
Xu Q, McMullan D, Jaroszewski L, Krishna SS, Elsliger M-A, et al. (2010) Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution. Acta Cryst F66: 1230-1236.
-
(2010)
Acta Cryst
, vol.F66
, pp. 1230-1236
-
-
Xu, Q.1
McMullan, D.2
Jaroszewski, L.3
Krishna, S.S.4
Elsliger, M.-A.5
-
8
-
-
33744832396
-
Structural characterization of Salmonella typhimurium YeaZ, an M22 O-sialoglycoprotein endopeptidase homolog
-
Nichols CE, Johnson C, Lockyer M, Charles IG, Lamb HK, et al. (2006) Structural characterization of Salmonella typhimurium YeaZ, an M22 O-sialoglycoprotein endopeptidase homolog. Proteins: Struct Funct Genet 64: 111-123.
-
(2006)
Proteins: Struct Funct Genet
, vol.64
, pp. 111-123
-
-
Nichols, C.E.1
Johnson, C.2
Lockyer, M.3
Charles, I.G.4
Lamb, H.K.5
-
9
-
-
79952281325
-
A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification
-
Yacoubi BE, Hatin I, Deutsch C, Kahveci T, Rousset J-P, et al. (2011) A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification. EMBO J 30: 882-893.
-
(2011)
EMBO J
, vol.30
, pp. 882-893
-
-
Yacoubi, B.E.1
Hatin, I.2
Deutsch, C.3
Kahveci, T.4
Rousset, J.-P.5
-
10
-
-
79959253559
-
The highly conserved KEOPS/EKC complex is essential for a universal tRNA modification, t6A
-
Srinivasan M, Mehta P, Yu Y, Prugar E, Koonin EV, et al. (2010) The highly conserved KEOPS/EKC complex is essential for a universal tRNA modification, t6A. EMBO J 29: 1-9.
-
(2010)
EMBO J
, vol.29
, pp. 1-9
-
-
Srinivasan, M.1
Mehta, P.2
Yu, Y.3
Prugar, E.4
Koonin, E.V.5
-
12
-
-
0035158122
-
Urkinase: structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases
-
Buss KA, Cooper DR, Ingram-Smith C, Ferry JG, Sanders DA, et al. (2001) Urkinase: structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases. J Bacteriol 183: 680-686.
-
(2001)
J Bacteriol
, vol.183
, pp. 680-686
-
-
Buss, K.A.1
Cooper, D.R.2
Ingram-Smith, C.3
Ferry, J.G.4
Sanders, D.A.5
-
13
-
-
0029948487
-
The sugar kinase/heat shock protein 70/actin superfamily: Implications of conserved structure for mechanism
-
Hurley JH, (1996) The sugar kinase/heat shock protein 70/actin superfamily: Implications of conserved structure for mechanism. Annu Rev Biophys Struct 25: 137-162.
-
(1996)
Annu Rev Biophys Struct
, vol.25
, pp. 137-162
-
-
Hurley, J.H.1
-
15
-
-
0026687729
-
An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin and hsp70 heat shock proteins
-
Bork P, Sander C, Valencia A, (1992) An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin and hsp70 heat shock proteins. Proc Natl Acad Sci USA 89: 7290-7294.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 7290-7294
-
-
Bork, P.1
Sander, C.2
Valencia, A.3
-
16
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ, (1997) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1997)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
17
-
-
0032961270
-
ESPript: analysis of multiple sequence alignments in PostScript
-
Gouet P, Courcelle E, Stuart DI, Metoz F, (1999) ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 15: 305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
18
-
-
54049140483
-
Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine
-
Mao DY, Neculai D, Downey M, Orlicky S, Haffani YZ, et al. (2008) Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine. Mol Cell 32: 259-275.
-
(2008)
Mol Cell
, vol.32
, pp. 259-275
-
-
Mao, D.Y.1
Neculai, D.2
Downey, M.3
Orlicky, S.4
Haffani, Y.Z.5
-
19
-
-
59749094748
-
The universal Kae1 protein and the associated Bud32 kinase (PRPK), a mysterious protein couple probably essential for genome maintenance in Archaea and Eukarya
-
Hecker A, Graille M, Madec E, Gadelle D, Le Cam E, et al. (2009) The universal Kae1 protein and the associated Bud32 kinase (PRPK), a mysterious protein couple probably essential for genome maintenance in Archaea and Eukarya. Biochem Soc Trans 37: 29-35.
-
(2009)
Biochem Soc Trans
, vol.37
, pp. 29-35
-
-
Hecker, A.1
Graille, M.2
Madec, E.3
Gadelle, D.4
Le Cam, E.5
-
20
-
-
79955663963
-
Purification, crystallization and preliminary X-ray crystallographic analysis of the putative Vibrio parahaemolyticus resuscitation promoting factor YeaZ
-
Aydin I, Dimitropoulos A, Chen SH, Thomas C, Roujeinikova A, (2011) Purification, crystallization and preliminary X-ray crystallographic analysis of the putative Vibrio parahaemolyticus resuscitation promoting factor YeaZ. Acta Cryst F67: 604-607.
-
(2011)
Acta Cryst
, vol.F67
, pp. 604-607
-
-
Aydin, I.1
Dimitropoulos, A.2
Chen, S.H.3
Thomas, C.4
Roujeinikova, A.5
-
21
-
-
0029109468
-
Protein-protein interfactions: A review of protein dimer structures
-
Jones S, Thornton JM, (1995) Protein-protein interfactions: A review of protein dimer structures. Prog Biophys Mol Biol 63: 31-65.
-
(1995)
Prog Biophys Mol Biol
, vol.63
, pp. 31-65
-
-
Jones, S.1
Thornton, J.M.2
-
22
-
-
3142666890
-
Structural characterization of the stringent response related exopolyphosphatase/guanosine pentaphosphate phosphohydrolase protein family
-
Kristensen O, Laurberg M, Liljas A, Kastrup JS, Gajhede M, (2004) Structural characterization of the stringent response related exopolyphosphatase/guanosine pentaphosphate phosphohydrolase protein family. Biochemistry 43: 8894-8900.
-
(2004)
Biochemistry
, vol.43
, pp. 8894-8900
-
-
Kristensen, O.1
Laurberg, M.2
Liljas, A.3
Kastrup, J.S.4
Gajhede, M.5
-
23
-
-
0141788221
-
Involvement of rpoS in the survival of Escherichia coli in the viable but nonculturable state
-
Boaretti M, Lleò MM, Bonato B, Signoretto C, Canepari P, (2003) Involvement of rpoS in the survival of Escherichia coli in the viable but nonculturable state. Environ Microbiol 5: 986-996.
-
(2003)
Environ Microbiol
, vol.5
, pp. 986-996
-
-
Boaretti, M.1
Lleò, M.M.2
Bonato, B.3
Signoretto, C.4
Canepari, P.5
-
24
-
-
37549035447
-
Structure of the PPX/GPPA phosphatase from Aquifex aeolicus in complex with the alarmone ppGpp
-
Kristensen O, Ross B, Gajhede M, (2008) Structure of the PPX/GPPA phosphatase from Aquifex aeolicus in complex with the alarmone ppGpp. J Mol Biol 375: 1469-1476.
-
(2008)
J Mol Biol
, vol.375
, pp. 1469-1476
-
-
Kristensen, O.1
Ross, B.2
Gajhede, M.3
-
25
-
-
23844546311
-
Likelihood-enhanced fast translation functions
-
McCoy AJ, Grosse-Kunstleve RW, Storoni LC, Read RJ, (2005) Likelihood-enhanced fast translation functions. Acta Cryst D61: 458-464.
-
(2005)
Acta Cryst
, vol.D61
, pp. 458-464
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Storoni, L.C.3
Read, R.J.4
-
26
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P, Cowtan K, (2004) Coot: model-building tools for molecular graphics. Acta Crystallogr D60: 2126-2132.
-
(2004)
Acta Crystallogr
, vol.D60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
27
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews BW, (1968) Solvent content of protein crystals. J Mol Biol 33: 491-497.
-
(1968)
J Mol Biol
, vol.33
, pp. 491-497
-
-
Matthews, B.W.1
-
28
-
-
0028103275
-
The CCP4 suite: programs for protein crystallography
-
Collaborative Computational Project Number 4
-
Collaborative Computational Project Number 4 (1994) The CCP4 suite: programs for protein crystallography. Acta Cryst D50: 760-763.
-
(1994)
Acta Cryst
, vol.D50
, pp. 760-763
-
-
-
29
-
-
0035182073
-
Use of tls parameters to model anisotropic displacements in macromolecular refinement
-
Winn MD, Isupov MN, Murshudov GN, (2001) Use of tls parameters to model anisotropic displacements in macromolecular refinement. Acta Crystallogr D57: 122-133.
-
(2001)
Acta Crystallogr
, vol.D57
, pp. 122-133
-
-
Winn, M.D.1
Isupov, M.N.2
Murshudov, G.N.3
-
30
-
-
34547592557
-
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
-
Davis IW, Leaver-Fay A, Chen VB, Block JN, Kapral GJ, et al. (2007) MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res 35: W375-W383.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
|