-
2
-
-
1642299704
-
The first plant type III polyketide synthase that catalyzes formation of aromatic heptaketide
-
Abe I, Utsumi Y, Oguro S, Noguchi H (2004) The first plant type III polyketide synthase that catalyzes formation of aromatic heptaketide. FEBS 562: 171-176.
-
(2004)
Febs
, vol.562
, pp. 171-176
-
-
Abe, I.1
Utsumi, Y.2
Oguro, S.3
Noguchi, H.4
-
3
-
-
24744454823
-
Engineered biosynthesis of plant polyketides: chain length control in octaketide-producing plant type III polyketide synthase
-
Abe I, Oguro S, Utsumi Y, Sano Y, Noguchi H (2005a) Engineered biosynthesis of plant polyketides: chain length control in octaketide-producing plant type III polyketide synthase. J Am Chem Soc 127: 12709-12716.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 12709-12716
-
-
Abe, I.1
Oguro, S.2
Utsumi, Y.3
Sano, Y.4
Noguchi, H.5
-
4
-
-
13444282087
-
A plant type III polyketide synthase that produces pentaketide chromone
-
Abe I, Utsumi Y, Oguro S, Morita H, Sano Y, Noguchi H (2005b) A plant type III polyketide synthase that produces pentaketide chromone. J Am Chem Soc 127: 1362-1363.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 1362-1363
-
-
Abe, I.1
Utsumi, Y.2
Oguro, S.3
Morita, H.4
Sano, Y.5
Noguchi, H.6
-
5
-
-
34248526212
-
Structure-based engineering of a plant type III polyketide synthase: formation of an unnatural nonaketide naphthopyrone
-
Abe I, Morita H, Oguro S, Noma H, Wanibuchi K, Kawahara N, Goda Y, Noguchi H, Kohno T (2007) Structure-based engineering of a plant type III polyketide synthase: formation of an unnatural nonaketide naphthopyrone. J Am Chem Soc 129: 5976-5980.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 5976-5980
-
-
Abe, I.1
Morita, H.2
Oguro, S.3
Noma, H.4
Wanibuchi, K.5
Kawahara, N.6
Goda, Y.7
Noguchi, H.8
Kohno, T.9
-
6
-
-
0036811712
-
Marine tannins: the importance of a mechanistic framework for predicting ecological roles
-
Arnold TM, Targett NC (2002) Marine tannins: the importance of a mechanistic framework for predicting ecological roles. J Chem Ecol 28: 1919-1934.
-
(2002)
J Chem Ecol
, vol.28
, pp. 1919-1934
-
-
Arnold, T.M.1
Targett, N.C.2
-
7
-
-
33747598945
-
Biosynthesis of Dictyostelium discoideum differentiation-inducing factor by a hybrid type I fatty acid-type III polyketide synthase
-
Austin MB, Saito T, Bowman ME, Haydock S, Kato A, Moore BS, Kay RR, Noel JP (2006) Biosynthesis of Dictyostelium discoideum differentiation-inducing factor by a hybrid type I fatty acid-type III polyketide synthase. Nat Chem Biol 2: 494-502.
-
(2006)
Nat Chem Biol
, vol.2
, pp. 494-502
-
-
Austin, M.B.1
Saito, T.2
Bowman, M.E.3
Haydock, S.4
Kato, A.5
Moore, B.S.6
Kay, R.R.7
Noel, J.P.8
-
8
-
-
0034991149
-
Phylogenetic relationships among algae based on complete large-subunit rRNA sequences
-
Ben Ali A, De Baere R, van der Auwera G, De Wachter R, van de Peer Y (2001) Phylogenetic relationships among algae based on complete large-subunit rRNA sequences. Int J Syst Evol Microbiol 51: 737-749.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 737-749
-
-
Ben Ali, A.1
de Baere, R.2
van der Auwera, G.3
de Wachter, R.4
van de Peer, Y.5
-
10
-
-
33745367094
-
A type III polyketide synthase from Wachendorfia thyrsiflora and its role in diarylheptanoid and phenylphenalenone biosynthesis
-
Brand S, Hölscher D, Schierhorn A, Svatoš A, Schröder J, Schneider B (2006) A type III polyketide synthase from Wachendorfia thyrsiflora and its role in diarylheptanoid and phenylphenalenone biosynthesis. Planta 224: 413-428.
-
(2006)
Planta
, vol.224
, pp. 413-428
-
-
Brand, S.1
Hölscher, D.2
Schierhorn, A.3
Svatoš, A.4
Schröder, J.5
Schneider, B.6
-
11
-
-
61749085917
-
Eicosapentaenoic acid: possible precursor of the phloroglucinol derivatives isolated from the brown alga Zonaria tournefortii (J.V. Lamouroux) Montagne
-
El Hattab M, Bouzidi N, Ortalo-Magné A, Daghbouche Y, Richou M, Chitour SE, de Reviers B, Piovetti L (2009) Eicosapentaenoic acid: possible precursor of the phloroglucinol derivatives isolated from the brown alga Zonaria tournefortii (J. V. Lamouroux) Montagne. Biochem Syst Ecol 37: 55-58.
-
(2009)
Biochem Syst Ecol
, vol.37
, pp. 55-58
-
-
El Hattab, M.1
Bouzidi, N.2
Ortalo-Magné, A.3
Daghbouche, Y.4
Richou, M.5
Chitour, S.E.6
de Reviers, B.7
Piovetti, L.8
-
12
-
-
0000122573
-
PHYLIP-phylogeny inference package (Version 3.2)
-
Felsenstein J (1989) PHYLIP-phylogeny inference package (Version 3. 2). Cladistics 5: 164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
13
-
-
80051670394
-
Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis
-
Ferrer JL, Jez JM, Bowman ME, Dixon RA, Noel JP (1999) Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis. Nat Prod Rep 20: 79-110.
-
(1999)
Nat Prod Rep
, vol.20
, pp. 79-110
-
-
Ferrer, J.L.1
Jez, J.M.2
Bowman, M.E.3
Dixon, R.A.4
Noel, J.P.5
-
14
-
-
0036844888
-
Alteration of reaction and substrate specificity of a bacterial type III polyketide synthase by site-directed mutagenesis
-
Funa N, Ohnishi Y, Ebizuka Y, Horinouchi S (2002) Alteration of reaction and substrate specificity of a bacterial type III polyketide synthase by site-directed mutagenesis. Biochem J 367: 781-789.
-
(2002)
Biochem J
, vol.367
, pp. 781-789
-
-
Funa, N.1
Ohnishi, Y.2
Ebizuka, Y.3
Horinouchi, S.4
-
15
-
-
0031434336
-
Fucophlorethols from the brown algae Sargassum spinuligerum and Cystophora torulosa
-
Glombitza KW, Keusgen M, Hauperich S (1997) Fucophlorethols from the brown algae Sargassum spinuligerum and Cystophora torulosa. Phytochemistry 46: 1417-1422.
-
(1997)
Phytochemistry
, vol.46
, pp. 1417-1422
-
-
Glombitza, K.W.1
Keusgen, M.2
Hauperich, S.3
-
16
-
-
33644552441
-
Bacterial type III polyketide synthases: phylogenetic analysis and potential for the production of novel secondary metabolites by heterologous expression in pseudomonads
-
Gross F, Luniak N, Perlova O, Gaitatzis N, Jenke-Kodama H, Gerth K, Gottschalk D, Dittmann E, Müller R (2006) Bacterial type III polyketide synthases: phylogenetic analysis and potential for the production of novel secondary metabolites by heterologous expression in pseudomonads. Arch Microbiol 185: 28-38.
-
(2006)
Arch Microbiol
, vol.185
, pp. 28-38
-
-
Gross, F.1
Luniak, N.2
Perlova, O.3
Gaitatzis, N.4
Jenke-Kodama, H.5
Gerth, K.6
Gottschalk, D.7
Dittmann, E.8
Müller, R.9
-
17
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
-
Guex N, Peitsch MC (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18: 2714-2723.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
18
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41: 95-98.
-
(1999)
Nucl Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
19
-
-
0025606149
-
Molecular genetics of polyketides and its comparison to fatty acid biosynthesis
-
Hopwood DA, Sherman DH (1990) Molecular genetics of polyketides and its comparison to fatty acid biosynthesis. Annu Rev Genet 23: 37-66.
-
(1990)
Annu Rev Genet
, vol.23
, pp. 37-66
-
-
Hopwood, D.A.1
Sherman, D.H.2
-
20
-
-
11844253269
-
Exploiting the reaction flexibility of a type III polyketide synthase through in vitro pathway manipulation
-
Jeong J-C, Srinivasan A, Grüschow S, Bach H, Sherman DH, Dordick JS (2005) Exploiting the reaction flexibility of a type III polyketide synthase through in vitro pathway manipulation. J Am Chem Soc 127: 64-65.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 64-65
-
-
Jeong, J.-C.1
Srinivasan, A.2
Grüschow, S.3
Bach, H.4
Sherman, D.H.5
Dordick, J.S.6
-
21
-
-
0034526571
-
Structural control of polyketide formation in plant-specific polyketide synthases
-
Jez JM, Austin MB, Ferrer J-L, Bowman ME, Schröder J, Noel JP (2000) Structural control of polyketide formation in plant-specific polyketide synthases. Chem Biol 7: 919-930.
-
(2000)
Chem Biol
, vol.7
, pp. 919-930
-
-
Jez, J.M.1
Austin, M.B.2
Ferrer, J.-L.3
Bowman, M.E.4
Schröder, J.5
Noel, J.P.6
-
22
-
-
0035846573
-
Structure-guided programming of polyketide chain-length determination in chalcone synthase
-
Jez JM, Bowman ME, Noel JP (2001a) Structure-guided programming of polyketide chain-length determination in chalcone synthase. Biochemistry 40: 14829-14838.
-
(2001)
Biochemistry
, vol.40
, pp. 14829-14838
-
-
Jez, J.M.1
Bowman, M.E.2
Noel, J.P.3
-
23
-
-
0035543841
-
Structure and mechanism of chalcone synthase-like polyketide synthases
-
Jez JM, Ferrer J-L, Bowman ME, Austin MB, Schröder J, Dixon RA, Noel JP (2001b) Structure and mechanism of chalcone synthase-like polyketide synthases. J Ind Microbiol Biotech 27: 393-398.
-
(2001)
J Ind Microbiol Biotech
, vol.27
, pp. 393-398
-
-
Jez, J.M.1
Ferrer, J.-L.2
Bowman, M.E.3
Austin, M.B.4
Schröder, J.5
Dixon, R.A.6
Noel, J.P.7
-
24
-
-
0037117475
-
Expanding the biosynthetic repertoire of plant type III polyketide synthases by altering starter molecule specificity
-
Jez JM, Bowman ME, Noel JP (2002) Expanding the biosynthetic repertoire of plant type III polyketide synthases by altering starter molecule specificity. Proc Natl Acad Sci USA 99: 5319-5324.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 5319-5324
-
-
Jez, J.M.1
Bowman, M.E.2
Noel, J.P.3
-
25
-
-
0030880571
-
A phloroglucinol derivative from the brown alga Sargassum spinuligerum
-
Keusgen M, Falk M, Walter JA, Glombitza KW (1997) A phloroglucinol derivative from the brown alga Sargassum spinuligerum. Phytochemistry 46: 341-345.
-
(1997)
Phytochemistry
, vol.46
, pp. 341-345
-
-
Keusgen, M.1
Falk, M.2
Walter, J.A.3
Glombitza, K.W.4
-
26
-
-
0000724125
-
Fatty acid composition of seven Sargassum species
-
Khotimchenko SV (2008) fatty acid composition of seven Sargassum species. Phytochemistry 30: 2639-2641.
-
(2008)
Phytochemistry
, vol.30
, pp. 2639-2641
-
-
Khotimchenko, S.V.1
-
28
-
-
12844249594
-
Starter substrate specificities of wild-type and mutant polyketide synthases from Rutaceae
-
Lukačin R, Schreiner S, Silber K, Matern U (2005) Starter substrate specificities of wild-type and mutant polyketide synthases from Rutaceae. Phytochemistry 66: 277-284.
-
(2005)
Phytochemistry
, vol.66
, pp. 277-284
-
-
Lukačin, R.1
Schreiner, S.2
Silber, K.3
Matern, U.4
-
29
-
-
38949095007
-
Direct transfer of starter substrate from type I fatty acid synthase to type III polyketide synthases in phenolic lipid synthesis
-
Miyanaga A, Funa N, Awakawa T, Horinouchi S (2008) Direct transfer of starter substrate from type I fatty acid synthase to type III polyketide synthases in phenolic lipid synthesis. Proc Natl Acad Sci USA 105: 871-876.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 871-876
-
-
Miyanaga, A.1
Funa, N.2
Awakawa, T.3
Horinouchi, S.4
-
30
-
-
57349162065
-
Structure function analysis of novel type III polyketide synthases from Arabidopsis thaliana
-
Mizuuchi Y, Shimokawa Y, Wanibuchi K, Noguchi H, Abe I (2008) Structure function analysis of novel type III polyketide synthases from Arabidopsis thaliana. Biol Pharm Bull 31: 2205-2210.
-
(2008)
Biol Pharm Bull
, vol.31
, pp. 2205-2210
-
-
Mizuuchi, Y.1
Shimokawa, Y.2
Wanibuchi, K.3
Noguchi, H.4
Abe, I.5
-
31
-
-
0035825480
-
Discovery of a new bacterial polyketide biosynthetic pathway
-
Moore BS, Hopke JN (2001) Discovery of a new bacterial polyketide biosynthetic pathway. Chem Biochem 2: 35-38.
-
(2001)
Chem Biochem
, vol.2
, pp. 35-38
-
-
Moore, B.S.1
Hopke, J.N.2
-
32
-
-
34247239393
-
Structural insight into chain-length control and product specificity of pentaketide chromone synthase from Aloe arborescens
-
Morita H, Kondo S, Oguro S, Noguchi H, Sugio S, Abe I, Kohno T (2007) Structural insight into chain-length control and product specificity of pentaketide chromone synthase from Aloe arborescens. Chem Biol 14: 359-369.
-
(2007)
Chem Biol
, vol.14
, pp. 359-369
-
-
Morita, H.1
Kondo, S.2
Oguro, S.3
Noguchi, H.4
Sugio, S.5
Abe, I.6
Kohno, T.7
-
33
-
-
0035834039
-
Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites
-
Ōmura S, Ikeda H, Ishikawa J, Hanamoto A, Takahashi C, Shinose M, Takahashi Y, Horikawa H, Nakazawa H, Osonoe T, Kikuchi H, Shiba T, Sakaki Y, Hattori M (2001) Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites. Proc Natl Acad Sci USA 98: 12215-12220.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 12215-12220
-
-
Omura, S.1
Ikeda, H.2
Ishikawa, J.3
Hanamoto, A.4
Takahashi, C.5
Shinose, M.6
Takahashi, Y.7
Horikawa, H.8
Nakazawa, H.9
Osonoe, T.10
Kikuchi, H.11
Shiba, T.12
Sakaki, Y.13
Hattori, M.14
-
34
-
-
0030203863
-
TREEVIEW: an application to display phylogenetic trees on personal computers
-
Page RDM (1996) TREEVIEW: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12: 357-358.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 357-358
-
-
Page, R.D.M.1
-
35
-
-
0035102454
-
Biosynthesis of polyketides in heterologous hosts
-
Pfeifer BA, Khosla C (2001) Biosynthesis of polyketides in heterologous hosts. Microbiol Mol Biol Rev 65: 106-118.
-
(2001)
Microbiol Mol Biol Rev
, vol.65
, pp. 106-118
-
-
Pfeifer, B.A.1
Khosla, C.2
-
36
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
37
-
-
4344585355
-
A novel tunnel in mycobacterial type III polyketide synthase reveals the structural basis for generating diverse metabolites
-
Sankaranarayanam R, Saxena P, Marathe UB, Gokhale RS, Shanmugam VM, Rukmini R (2004) A novel tunnel in mycobacterial type III polyketide synthase reveals the structural basis for generating diverse metabolites. Nat Struct Mol Biol 11: 894-900.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 894-900
-
-
Sankaranarayanam, R.1
Saxena, P.2
Marathe, U.B.3
Gokhale, R.S.4
Shanmugam, V.M.5
Rukmini, R.6
-
38
-
-
0242666130
-
A new family of type III polyketide synthases in mycobacterium tuberculosis
-
Saxena P, Yadav G, Mohanty D, Gokhale R (2003) A new family of type III polyketide synthases in mycobacterium tuberculosis. J Biol Chem 278: 44780-44790.
-
(2003)
J Biol Chem
, vol.278
, pp. 44780-44790
-
-
Saxena, P.1
Yadav, G.2
Mohanty, D.3
Gokhale, R.4
-
39
-
-
0040241878
-
A family of plant-specific polyketide synthases: facts and predictions
-
Schröder J (1997) A family of plant-specific polyketide synthases: facts and predictions. Trends Plant Sci 2: 373-378.
-
(1997)
Trends Plant Sci
, vol.2
, pp. 373-378
-
-
Schröder, J.1
-
40
-
-
0000427346
-
Biosynthesis of aromatic polyketides
-
Shen B (2000) Biosynthesis of aromatic polyketides. Top Curr Chem 109: 1-51.
-
(2000)
Top Curr Chem
, vol.109
, pp. 1-51
-
-
Shen, B.1
-
41
-
-
33746589549
-
Phloroglucinol compounds of natural origins
-
Singh IP, Bharate SB (2006) Phloroglucinol compounds of natural origins. Nat Prod Rep 23: 558-591.
-
(2006)
Nat Prod Rep
, vol.23
, pp. 558-591
-
-
Singh, I.P.1
Bharate, S.B.2
-
42
-
-
0016736883
-
Chemical syntheses and properties of hydroxycinnamoyl-coenzyme a derivatives
-
Stöckigt J, Zenk MH (1975) Chemical syntheses and properties of hydroxycinnamoyl-coenzyme a derivatives. Z Naturforsch 30c: 352-358.
-
(1975)
Z Naturforsch
, vol.30 c
, pp. 352-358
-
-
Stöckigt, J.1
Zenk, M.H.2
-
43
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
44
-
-
33846781472
-
An acridone-producing novel multifunctional type III polyketide synthase from Huperzia serrata
-
Wanibuchi K, Zhang P, Abe T, Morita H, Kohno T, Chen G, Noguchi H, Abe I (2007) An acridone-producing novel multifunctional type III polyketide synthase from Huperzia serrata. FEBS 274: 1073-1082.
-
(2007)
Febs
, vol.274
, pp. 1073-1082
-
-
Wanibuchi, K.1
Zhang, P.2
Abe, T.3
Morita, H.4
Kohno, T.5
Chen, G.6
Noguchi, H.7
Abe, I.8
-
46
-
-
0036011081
-
Biosynthesis of flavonoids and effects of stress
-
Winkel-Shirley B (2002) Biosynthesis of flavonoids and effects of stress. Curr Opin Plant Biol 5: 218-223.
-
(2002)
Curr Opin Plant Biol
, vol.5
, pp. 218-223
-
-
Winkel-Shirley, B.1
-
47
-
-
34249071274
-
Analyses of expressed sequence tags (ESTs) from Sargassum binderi (Phaeophyta)
-
Wong TK-M, Ho C-L, Lee W-W, Rahim RA, Phang S-M (2007) Analyses of expressed sequence tags (ESTs) from Sargassum binderi (Phaeophyta). J Phycol 43: 528-534.
-
(2007)
J Phycol
, vol.43
, pp. 528-534
-
-
Wong, T.K.-M.1
Ho, C.-L.2
Lee, W.-W.3
Rahim, R.A.4
Phang, S.-M.5
-
48
-
-
0035896547
-
-
Zhang YM, Rao MS, Heath RJ, Price AC, Olson AJ, Rock CO, White SW (2001) J Biol Chem 276: 8231-8238.
-
(2001)
J Biol Chem
, vol.276
, pp. 8231-8238
-
-
Zhang, Y.M.1
Rao, M.S.2
Heath, R.J.3
Price, A.C.4
Olson, A.J.5
Rock, C.O.6
White, S.W.7
|