-
2
-
-
58149216546
-
RNA stability: Is it the endo' the world as we know it?
-
Wilusz J. RNA stability: is it the endo' the world as we know it? Nat. Struct. Mol. Biol. 16 2009 9 10
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 9-10
-
-
Wilusz, J.1
-
3
-
-
77956034926
-
Novel endoribonucleases as central players in various pathways of eukaryotic RNA metabolism
-
Tomecki R., and Dziembowski A. Novel endoribonucleases as central players in various pathways of eukaryotic RNA metabolism RNA 16 2010 1692 1724
-
(2010)
RNA
, vol.16
, pp. 1692-1724
-
-
Tomecki, R.1
Dziembowski, A.2
-
4
-
-
75149146546
-
Endoribonucleases-enzymes gaining spotlight in mRNA metabolism
-
Li W.M., Barnes T., and Lee C.H. Endoribonucleases-enzymes gaining spotlight in mRNA metabolism FEBS J. 277 2010 627 641
-
(2010)
FEBS J.
, vol.277
, pp. 627-641
-
-
Li, W.M.1
Barnes, T.2
Lee, C.H.3
-
5
-
-
57149118430
-
A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity
-
Nakamura T., and Sugita M. A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity FEBS Lett. 582 2008 4163 4168
-
(2008)
FEBS Lett.
, vol.582
, pp. 4163-4168
-
-
Nakamura, T.1
Sugita, M.2
-
6
-
-
58049190896
-
The tumor marker human placental protein 11 is an endoribonuclease
-
Laneve P., Gioia U., Ragno R., Altieri F., Di Franco C., and Santini T. The tumor marker human placental protein 11 is an endoribonuclease J. Biol. Chem. 283 2008 34712 34719
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 34712-34719
-
-
Laneve, P.1
Gioia, U.2
Ragno, R.3
Altieri, F.4
Di Franco, C.5
Santini, T.6
-
7
-
-
58149236691
-
The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities
-
Schaeffer D., Tsanova B., Barbas A., Reis F.P., Dastidar E.G., and Sanchez-Rotunno M. The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities Nat. Struct. Mol. Biol. 16 2009 56 62
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 56-62
-
-
Schaeffer, D.1
Tsanova, B.2
Barbas, A.3
Reis, F.P.4
Dastidar, E.G.5
Sanchez-Rotunno, M.6
-
8
-
-
68449090733
-
C3PO, an endoribonuclease that promotes RNAi by facilitating RISC activation
-
Liu Y., Ye X., Jiang F., Liang C., Chen D., and Peng J. C3PO, an endoribonuclease that promotes RNAi by facilitating RISC activation Science 325 2009 750 753
-
(2009)
Science
, vol.325
, pp. 750-753
-
-
Liu, Y.1
Ye, X.2
Jiang, F.3
Liang, C.4
Chen, D.5
Peng, J.6
-
10
-
-
70349168646
-
The role of mammalian ribonucleases (RNases) in cancer
-
Kim W.C., and Lee C.H. The role of mammalian ribonucleases (RNases) in cancer Biochim. Biophys. Acta 1796 2009 99 113
-
(2009)
Biochim. Biophys. Acta
, vol.1796
, pp. 99-113
-
-
Kim, W.C.1
Lee, C.H.2
-
11
-
-
0017948303
-
Inhibition of cell-free protein synthesis by pppA2′p5′ A2′p5′A: A novel oligonucleotide synthesized by interferon-treated L cell extracts
-
Clemens M.J., and Williams B.R. Inhibition of cell-free protein synthesis by pppA2′p5′A2′p5′A: a novel oligonucleotide synthesized by interferon-treated L cell extracts Cell 13 1978 565 572
-
(1978)
Cell
, vol.13
, pp. 565-572
-
-
Clemens, M.J.1
Williams, B.R.2
-
12
-
-
67650472415
-
Ribosomal protein mRNAs are primary targets of regulation in RNase-L-induced senescence
-
Andersen J.B., Mazan-Mamczarz K., Zhan M., Gorospe M., and Hassel B.A. Ribosomal protein mRNAs are primary targets of regulation in RNase-L-induced senescence RNA Biol. 6 2009 305 315
-
(2009)
RNA Biol.
, vol.6
, pp. 305-315
-
-
Andersen, J.B.1
Mazan-Mamczarz, K.2
Zhan, M.3
Gorospe, M.4
Hassel, B.A.5
-
13
-
-
65049090018
-
RNase L downmodulation of the RNA-binding protein, HuR, and cellular growth
-
Al-Ahmadi W., Al-Haj L., Al-Mohanna F.A., Silverman R.H., and Khabar K.S. RNase L downmodulation of the RNA-binding protein, HuR, and cellular growth Oncogene 28 2009 1782 1791
-
(2009)
Oncogene
, vol.28
, pp. 1782-1791
-
-
Al-Ahmadi, W.1
Al-Haj, L.2
Al-Mohanna, F.A.3
Silverman, R.H.4
Khabar, K.S.5
-
14
-
-
33847381588
-
C-Src Activates Endonuclease-Mediated mRNA Decay
-
DOI 10.1016/j.molcel.2007.01.026, PII S1097276507000494
-
Peng Y., and Schoenberg D.R. c-Src activates endonuclease-mediated mRNA decay Mol. Cell 25 2007 779 787 (Pubitemid 46341917)
-
(2007)
Molecular Cell
, vol.25
, Issue.5
, pp. 779-787
-
-
Peng, Y.1
Schoenberg, D.R.2
-
15
-
-
67651149733
-
Identification of apurinic/apyrimidinic endonuclease (APE1) as the endoribonuclease that cleaves c-myc mRNA
-
Barnes T., Kim W.C., Mantha A., Kim S.E., Izumi T., Sankar M., and Lee C.H. Identification of apurinic/apyrimidinic endonuclease (APE1) as the endoribonuclease that cleaves c-myc mRNA Nucleic Acids Res. 37 2009 3946 3958
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 3946-3958
-
-
Barnes, T.1
Kim, W.C.2
Mantha, A.3
Kim, S.E.4
Izumi, T.5
Sankar, M.6
Lee, C.H.7
-
16
-
-
14044269479
-
The intracellular localization of APE1/Ref-1: More than a passive phenomenon?
-
DOI 10.1089/ars.2005.7.367
-
Tell G., Damante G., Caldwell D., and Kelley M.R. The intracellular localization of APE1/Ref-1: more than a passive phenomenon? Antioxid. Redox Signal. 7 2005 367 384 (Pubitemid 40279805)
-
(2005)
Antioxidants and Redox Signaling
, vol.7
, Issue.3-4
, pp. 367-384
-
-
Tell, G.1
Damante, G.2
Caldwell, D.3
Kelley, M.R.4
-
18
-
-
0034719372
-
DNA-bound structures and mutants reveal abasic DNA binding by APE1 DNA repair and coordination
-
DOI 10.1038/35000249
-
Mol C.D., Izumi T., Mitra S., and Tainer J.A. DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination Nature 403 2000 451 456 (Pubitemid 30073097)
-
(2000)
Nature
, vol.403
, Issue.6768
, pp. 451-456
-
-
Mol, C.D.1
Izumi, T.2
Mitra, S.3
Talner, J.A.4
-
19
-
-
0029972312
-
Asparagine 212 is essential for abasic site recognition by the human DNA repair endonuclease HAP1
-
DOI 10.1093/nar/24.21.4217
-
Rothwell D.G., and Hickson I.D. Asparagine 212 is essential for abasic site recognition by the human DNA repair endonuclease HAP1 Nucleic Acids Res. 24 1996 4217 4221 (Pubitemid 26377338)
-
(1996)
Nucleic Acids Research
, vol.24
, Issue.21
, pp. 4217-4221
-
-
Rothwell, D.G.1
Hickson, L.D.2
-
20
-
-
84961981834
-
Elements in abasic site recognition by the major human and Escherichia coli apurinic/apyrimidinic endonucleases
-
DOI 10.1093/nar/26.11.2771
-
Erzberger J.P., Barsky D., Schärer O.D., Colvin M.E., and Wilson D.M. III Elements in abasic site recognition by the major human and Escherichia coli apurinic/apyrimidinic endonucleases Nucleic Acids Res. 26 1998 2771 2778 (Pubitemid 28297395)
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.11
, pp. 2771-2778
-
-
Erzberger, J.P.1
Barsky, D.2
Scharer, O.D.3
Colvin, M.E.4
Wilson III, D.M.5
-
21
-
-
0033538343
-
2+ and specific amino acid residues in the catalytic reaction of the major human abasic endonuclease: New insights from EDTA-resistant incision of acyclic abasic site analogs and site-directed mutagenesis
-
DOI 10.1006/jmbi.1999.2888
-
2+ and specific amino acid residues in the catalytic reaction of the major human abasic endonuclease: new insights from EDTA-resistant incision of acyclic abasic site analogs and site-directed mutagenesis J. Mol. Biol. 290 1999 447 457 (Pubitemid 29324829)
-
(1999)
Journal of Molecular Biology
, vol.290
, Issue.2
, pp. 447-457
-
-
Erzberger, J.P.1
Wilson III, D.M.2
-
22
-
-
0034668113
-
Functional characterization of APE1 variants identified in the human population
-
Hadi M.Z., Coleman M.A., Fidelis K., Mohrenweiser H.W., and Wilson D.M. III Functional characterization of APE1 variants identified in the human population Nucleic Acids Res. 28 2000 3871 3879
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3871-3879
-
-
Hadi, M.Z.1
Coleman, M.A.2
Fidelis, K.3
Mohrenweiser, H.W.4
Wilson III, D.M.5
-
23
-
-
0034607548
-
Mapping the protein-DNA interface and the metal-binding site of the major human apurinic/apyrimidinic endonuclease
-
Nguyen L.H., Barsky D., Erzberger J.P., and Wilson D.M. III Mapping the protein-DNA interface and the metal-binding site of the major human apurinic/apyrimidinic endonuclease J. Mol. Biol. 298 2000 447 459
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 447-459
-
-
Nguyen, L.H.1
Barsky, D.2
Erzberger, J.P.3
Wilson III, D.M.4
-
25
-
-
0026004662
-
Two distinct human DNA diesterases that hydrolyze 3β-blocking deoxyribose fragments from oxidized DNA
-
Chen D.S., Herman T., and Demple B. Two distinct human DNA diesterases that hydrolyze 3′-blocking deoxyribose fragments from oxidized DNA Nucleic Acids Res. 19 1991 5907 5914 (Pubitemid 21913003)
-
(1991)
Nucleic Acids Research
, vol.19
, Issue.21
, pp. 5907-5914
-
-
Chen, D.S.1
Herman, T.2
Demple, B.3
-
26
-
-
0029001186
-
Incision activity of human apurinic endonuclease (Ape) at abasic site analogs in DNA
-
Wilson D.M. III, Takeshita M., Grollman A.P., and Demple B. Incision activity of human apurinic endonuclease (Ape) at abasic site analogs in DNA J. Biol. Chem. 270 1995 16002 16007
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 16002-16007
-
-
Wilson III, D.M.1
Takeshita, M.2
Grollman, A.P.3
Demple, B.4
-
27
-
-
0030788621
-
3'-Phosphodiesterase activity of human apurinic/apyrimidinic endonuclease at DNA double-strand break ends
-
DOI 10.1093/nar/25.12.2495
-
Suh D., Wilson D.M. III, and Povirk L.F. 3′-Phosphodiesterase activity of human apurinic/apyrimidinic endonuclease at DNA double-strand break ends Nucleic Acids Res. 25 1997 2495 2500 (Pubitemid 27303712)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.12
, pp. 2495-2500
-
-
Suh, D.1
Wilson III, D.M.2
Povirk, L.F.3
-
28
-
-
0028342951
-
Repair of oxidative damage to DNA: Enzymology and biology
-
Demple B., and Harrison L. Repair of oxidative damage to DNA: enzymology and biology Annu. Rev. Biochem. 63 1994 915 948 (Pubitemid 24218652)
-
(1994)
Annual Review of Biochemistry
, vol.63
, pp. 915-948
-
-
Demple, B.1
Harrison, L.2
-
29
-
-
0029010778
-
Site-directed mutagenesis of the human DNA repair enzyme HAP1: Identification of residues important for AP endonuclease and RNase H activity
-
Barzilay G., Walker L.J., Robson C.N., and Hickson I.D. Site-directed mutagenesis of the human DNA repair enzyme HAP1: identification of residues important for AP endonuclease and RNase H activity Nucleic Acids Res. 23 1995 1544 1550
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 1544-1550
-
-
Barzilay, G.1
Walker, L.J.2
Robson, C.N.3
Hickson, I.D.4
-
30
-
-
0038043250
-
The exonuclease activity of human apurinic/apyrimidinic endonuclease (APE1). Biochemical properties and inhibition by the natural dinucleotide Gp4G
-
Chou K.M., and Cheng Y.C. The exonuclease activity of human apurinic/apyrimidinic endonuclease (APE1). Biochemical properties and inhibition by the natural dinucleotide Gp4G J. Biol. Chem. 278 2003 18289 18296
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 18289-18296
-
-
Chou, K.M.1
Cheng, Y.C.2
-
31
-
-
43049167396
-
Characterization of abasic endoribonuclease activity of human Ape1 on alternative substrates, as well as effects of ATP and sequence context on AP site incision
-
Berquist B.R., McNeill D.R., and Wilson D.M. III Characterization of abasic endoribonuclease activity of human Ape1 on alternative substrates, as well as effects of ATP and sequence context on AP site incision J. Mol. Biol. 379 2008 17 27
-
(2008)
J. Mol. Biol.
, vol.379
, pp. 17-27
-
-
Berquist, B.R.1
McNeill, D.R.2
Wilson III, D.M.3
-
32
-
-
73549114235
-
Endoribonuclease activity of human apurinic/apyrimidinic endonuclease 1 revealed by a real-time fluorometric assay
-
Kim S.E., Gorrell A., Rader S.D., and Lee C.H. Endoribonuclease activity of human apurinic/apyrimidinic endonuclease 1 revealed by a real-time fluorometric assay Anal. Biochem. 398 2010 69 75
-
(2010)
Anal. Biochem.
, vol.398
, pp. 69-75
-
-
Kim, S.E.1
Gorrell, A.2
Rader, S.D.3
Lee, C.H.4
-
33
-
-
0029128447
-
Identification of critical active-site residues in the multifunctional human DNA repair enzyme HAP1
-
Barzilay G., Mol C.D., Robson C.N., Walker L.J., Cunningham R.P., Tainer J.A., and Hickson I.D. Identification of critical active-site residues in the multifunctional human DNA repair enzyme HAP1 Nat. Struct. Biol. 2 1995 561 568
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 561-568
-
-
Barzilay, G.1
Mol, C.D.2
Robson, C.N.3
Walker, L.J.4
Cunningham, R.P.5
Tainer, J.A.6
Hickson, I.D.7
-
34
-
-
42749086668
-
Unusual role of a cysteine residue in substrate binding and activity of human AP-endonuclease 1
-
Mantha A.K., Oezguen N., Bhakat K.K., Izumi T., Braun W., and Mitra S. Unusual role of a cysteine residue in substrate binding and activity of human AP-endonuclease 1 J. Mol. Biol. 379 2008 28 37
-
(2008)
J. Mol. Biol.
, vol.379
, pp. 28-37
-
-
Mantha, A.K.1
Oezguen, N.2
Bhakat, K.K.3
Izumi, T.4
Braun, W.5
Mitra, S.6
-
35
-
-
34047188544
-
CRD-BP shields c-myc and MDR-1 RNA from endonucleolytic attack by a mammalian endoribonuclease
-
DOI 10.1093/nar/gkl1148
-
Sparanese D., and Lee C.H. CRD-BP shields c-myc and MDR-1 RNA from endonucleolytic attack by a mammalian endoribonuclease Nucleic Acids Res. 35 2007 1209 1221 (Pubitemid 46522973)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.4
, pp. 1209-1221
-
-
Sparanese, D.1
Lee, C.H.2
-
36
-
-
0030839750
-
Abasic site binding by the human apurinic endonuclease, Ape, and determination of the DNA contact sites
-
DOI 10.1093/nar/25.5.933
-
Wilson D.M. III, Takeshita M., and Demple B. Abasic site binding by the human apurinic endonuclease, Ape, and determination of the DNA contact sites Nucleic Acids Res. 25 1997 933 939 (Pubitemid 27298260)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.5
, pp. 933-939
-
-
Wilson III, D.M.1
Takeshita, M.2
Demple, B.3
-
37
-
-
38349138832
-
Dipole-dipole interaction stabilizes the transition state of apurinic/apyrimidinic endonuclease-abasic site interaction
-
Adhikari S., Uren A., and Roy R. Dipole-dipole interaction stabilizes the transition state of apurinic/apyrimidinic endonuclease-abasic site interaction J. Biol. Chem. 283 2008 1334 1339
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 1334-1339
-
-
Adhikari, S.1
Uren, A.2
Roy, R.3
-
38
-
-
41749083469
-
Interaction of APE1 and other repair proteins with DNA duplexes imitating intermediates of DNA repair and replication
-
DOI 10.1007/s10541-008-3004-7
-
Dyrkheeva N.S., Khodyreva S.N., and Lavrik O.I. Interaction of APE1 and other repair proteins with DNA duplexes imitating intermediates of DNA repair and replication Biochemistry (Moscow) 73 2008 261 272 (Pubitemid 351490973)
-
(2008)
Biochemistry (Moscow)
, vol.73
, Issue.3
, pp. 261-272
-
-
Dyrkheeva, N.S.1
Khodyreva, S.N.2
Lavrik, O.I.3
-
39
-
-
0032515067
-
Rapid dissociation of human apurinic endonuclease (Ape1) from incised DNA induced by magnesium
-
DOI 10.1074/jbc.273.46.30360
-
Masuda Y., Bennett R.A.O., and Demple B. Rapid dissociation of human apurinic endonuclease (APE1) from incised DNA induced by magnesium J. Biol. Chem. 273 1998 30360 30365 (Pubitemid 28545506)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.46
, pp. 30360-30365
-
-
Masuda, Y.1
Bennett, R.A.O.2
Demple, B.3
-
40
-
-
0033586728
-
Single-turnover analysis of mutant human apurinic/apyrimidinic endonuclease
-
Lucas J.A., Masuda Y., Bennett R.A., Strauss N.S., and Strauss P.R. Single-turnover analysis of mutant human apurinic/apyrimidinic endonuclease Biochemistry 38 1999 4958 4964
-
(1999)
Biochemistry
, vol.38
, pp. 4958-4964
-
-
Lucas, J.A.1
Masuda, Y.2
Bennett, R.A.3
Strauss, N.S.4
Strauss, P.R.5
-
41
-
-
0030839013
-
Cleavage properties of an estrogen-regulated polysomal ribonuclease involved in the destabilization of albumin mRNA
-
DOI 10.1093/nar/25.4.735
-
Chernokalskaya E., Dompenciel R.E., and Schoenberg D.R. Cleavage properties of an estrogen-regulated polysomal ribonuclease involved in the destabilization of albumin mRNA Nucleic Acids Res. 25 1997 735 742 (Pubitemid 27299826)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.4
, pp. 735-742
-
-
Chernokalskaya, E.1
Dompenciel, R.2
Schoenberg, D.R.3
-
42
-
-
0038690166
-
Properties of and substrate determinants for the exonuclease activity of human apurinic endonuclease Ape1
-
DOI 10.1016/S0022-2836(03)00712-5
-
Wilson D.M. III Properties of and substrate determinants for the exonuclease activity of human apurinic endonuclease APE1 J. Mol. Biol. 330 2003 1027 1037 (Pubitemid 36818900)
-
(2003)
Journal of Molecular Biology
, vol.330
, Issue.5
, pp. 1027-1037
-
-
Wilson III, D.M.1
-
43
-
-
33847666362
-
Intracellular trafficking and regulation of mammalian AP-endonuclease 1 (APE1), an essential DNA repair protein
-
DOI 10.1016/j.dnarep.2006.10.010, PII S1568786406003193, Repair of small base lesions in DNA-from molecular biology to phenotype
-
Mitra S., Izumi T., Boldogh I., Bhakat K.K., Chattopadhyay R., and Szczesny B. Intracellular trafficking and regulation of mammalian AP-endoribonuclease 1 (APE1), and essential DNA repair protein DNA Repair 6 2007 461 469 (Pubitemid 46357051)
-
(2007)
DNA Repair
, vol.6
, Issue.4
, pp. 461-469
-
-
Mitra, S.1
Izumi, T.2
Boldogh, I.3
Bhakat, K.K.4
Chattopadhyay, R.5
Szczesny, B.6
-
44
-
-
0037034035
-
An exonucleolytic activity of human apurinic/apyrimidinic endonuclease on 3′ mispaired DNA
-
Chou K.M., and Cheng Y.C. An exonucleolytic activity of human apurinic/apyrimidinic endonuclease on 3′ mispaired DNA Nature 415 2002 655 659
-
(2002)
Nature
, vol.415
, pp. 655-659
-
-
Chou, K.M.1
Cheng, Y.C.2
|