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Volumn 63, Issue 3, 2011, Pages 399-431

Selective sweeps for recessive alleles and for other modes of dominance

Author keywords

Beneficial mutation; Genealogy; Genetic hitchhiking; Recessive allele; Selective sweep

Indexed keywords

ALLELE; ARTICLE; BIOLOGICAL MODEL; COMPUTER SIMULATION; GENETIC SELECTION; GENETIC VARIABILITY; RECESSIVE GENE;

EID: 80051667912     PISSN: 03036812     EISSN: 14321416     Source Type: Journal    
DOI: 10.1007/s00285-010-0382-4     Document Type: Article
Times cited : (21)

References (35)
  • 1
    • 0031673084 scopus 로고    scopus 로고
    • The effect of hitch-hiking on neutral genealogies
    • Barton N (1998) The effect of hitch-hiking on neutral genealogies. Genet Res 72: 123-133.
    • (1998) Genet Res , vol.72 , pp. 123-133
    • Barton, N.1
  • 2
    • 4644336663 scopus 로고    scopus 로고
    • Coalescence in a random background
    • Barton N, Etheridge A, Sturm A (2004) Coalescence in a random background. Ann Appl Probab 14(2): 754-785.
    • (2004) Ann Appl Probab , vol.14 , Issue.2 , pp. 754-785
    • Barton, N.1    Etheridge, A.2    Sturm, A.3
  • 3
    • 0000569949 scopus 로고
    • Fixation probabilities of additive alleles in diploid populations
    • Bürger R, Ewens W (1995) Fixation probabilities of additive alleles in diploid populations. J Math Biol 33: 557-575.
    • (1995) J Math Biol , vol.33 , pp. 557-575
    • Bürger, R.1    Ewens, W.2
  • 4
    • 55949127642 scopus 로고    scopus 로고
    • Positive Darwinian selection at single amino acid sites conferring plant virus resistance
    • Cavatorta J, Savage A, Yeam I, Gray S, Jahn M (2008) Positive Darwinian selection at single amino acid sites conferring plant virus resistance. J Mol Evol 67: 551-559.
    • (2008) J Mol Evol , vol.67 , pp. 551-559
    • Cavatorta, J.1    Savage, A.2    Yeam, I.3    Gray, S.4    Jahn, M.5
  • 5
    • 0032474823 scopus 로고    scopus 로고
    • Adaptive evolution: the struggle for dominance
    • Charlesworth B (1998) Adaptive evolution: the struggle for dominance. Curr Biol 8(14): R502-R504.
    • (1998) Curr Biol , vol.8 , Issue.14 , pp. 502-504
    • Charlesworth, B.1
  • 6
    • 0035601317 scopus 로고    scopus 로고
    • Occupation time fluctuations in branching systems
    • Dawson D, Gorostiza L, Wakolbinger A (2001) Occupation time fluctuations in branching systems. J Theor Probab 14: 729-796.
    • (2001) J Theor Probab , vol.14 , pp. 729-796
    • Dawson, D.1    Gorostiza, L.2    Wakolbinger, A.3
  • 8
    • 33746888732 scopus 로고    scopus 로고
    • An approximate sampling formula under genetic hitchhiking
    • Etheridge A, Pfaffelhuber P, Wakolbinger A (2006) An approximate sampling formula under genetic hitchhiking. Ann Appl Probab 16: 685-729.
    • (2006) Ann Appl Probab , vol.16 , pp. 685-729
    • Etheridge, A.1    Pfaffelhuber, P.2    Wakolbinger, A.3
  • 9
  • 10
    • 77955381733 scopus 로고    scopus 로고
    • MSMS: a coalescent simulation program including recombination, demographic structure, and selection at a single locus
    • Ewing G, Hermisson J (2010) MSMS: a coalescent simulation program including recombination, demographic structure, and selection at a single locus. Bioinformatics 26(16): 2064-2065.
    • (2010) Bioinformatics , vol.26 , Issue.16 , pp. 2064-2065
    • Ewing, G.1    Hermisson, J.2
  • 12
    • 0033911892 scopus 로고    scopus 로고
    • Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus
    • Hamblin M, Di Rienzo A (2000) Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus. Am J Hum Genet 66: 1669-1679.
    • (2000) Am J Hum Genet , vol.66 , pp. 1669-1679
    • Hamblin, M.1    Di Rienzo, A.2
  • 13
    • 18844439645 scopus 로고    scopus 로고
    • Soft sweeps: molecular population genetics of adaptation from standing genetic variation
    • Hermisson J, Pennings P (2005) Soft sweeps: molecular population genetics of adaptation from standing genetic variation. Genetics 169(4): 2335-2352.
    • (2005) Genetics , vol.169 , Issue.4 , pp. 2335-2352
    • Hermisson, J.1    Pennings, P.2
  • 14
    • 57349192138 scopus 로고    scopus 로고
    • The pattern of genetic hitchhiking under recurrent mutation
    • Hermisson J, Pfaffelhuber P (2008) The pattern of genetic hitchhiking under recurrent mutation. Electron J Probab 13(68): 2069-2106.
    • (2008) Electron J Probab , vol.13 , Issue.68 , pp. 2069-2106
    • Hermisson, J.1    Pfaffelhuber, P.2
  • 15
    • 23344438911 scopus 로고    scopus 로고
    • Distinguishing between selective sweeps and demography using DNA polymorphism data
    • Jensen J, Kim Y, Bauer DuMont V, Aquadro C, Bustamante C (2005) Distinguishing between selective sweeps and demography using DNA polymorphism data. Genetics 170: 1401-1410.
    • (2005) Genetics , vol.170 , pp. 1401-1410
    • Jensen, J.1    Kim, Y.2    Bauer Dumont, V.3    Aquadro, C.4    Bustamante, C.5
  • 16
    • 0024372736 scopus 로고
    • The 'Hitchhiking effect' revisited
    • Kaplan N, Hudson R, Langley C (1989) The 'Hitchhiking effect' revisited. Genetics 123: 887-899.
    • (1989) Genetics , vol.123 , pp. 887-899
    • Kaplan, N.1    Hudson, R.2    Langley, C.3
  • 18
    • 0036189827 scopus 로고    scopus 로고
    • Detecting a local signature of genetic hitchhiking along a recombining chromosome
    • Kim Y, Stephan W (2002) Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765-777.
    • (2002) Genetics , vol.160 , pp. 765-777
    • Kim, Y.1    Stephan, W.2
  • 19
    • 0000800333 scopus 로고
    • On the probability of fixation of mutant genes in a population
    • Kimura M (1962) On the probability of fixation of mutant genes in a population. Genetics 47: 713-719.
    • (1962) Genetics , vol.47 , pp. 713-719
    • Kimura, M.1
  • 20
    • 77957159682 scopus 로고    scopus 로고
    • Evolution of the ancestral recombination graph along the genome in case of selective sweep
    • Leocard S, Pardoux E (2010) Evolution of the ancestral recombination graph along the genome in case of selective sweep. J Math Biol 61(6): 819-841.
    • (2010) J Math Biol , vol.61 , Issue.6 , pp. 819-841
    • Leocard, S.1    Pardoux, E.2
  • 21
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favorable gene
    • Maynard Smith J, Haigh J (1974) The hitch-hiking effect of a favorable gene. Genet Res 23: 23-35.
    • (1974) Genet Res , vol.23 , pp. 23-35
    • Maynard Smith, J.1    Haigh, J.2
  • 22
    • 34249005874 scopus 로고    scopus 로고
    • The structure of linkage disequilibrium around a selective sweep
    • McVean G (2007) The structure of linkage disequilibrium around a selective sweep. Genetics 175: 1395-1406.
    • (2007) Genetics , vol.175 , pp. 1395-1406
    • McVean, G.1
  • 25
    • 33646592536 scopus 로고    scopus 로고
    • Soft sweeps II-molecular population genetics of adaptation from recurrent mutation or migration
    • Pennings P, Hermisson J (2006a) Soft sweeps II-molecular population genetics of adaptation from recurrent mutation or migration. Mol Biol Evol 23(5): 1076-1084.
    • (2006) Mol Biol Evol , vol.23 , Issue.5 , pp. 1076-1084
    • Pennings, P.1    Hermisson, J.2
  • 26
    • 33845971545 scopus 로고    scopus 로고
    • Soft sweeps III-the signature of positive selection from recurrent mutation
    • Pennings P, Hermisson J (2006b) Soft sweeps III-the signature of positive selection from recurrent mutation. PLoS Genet 2: e186.
    • (2006) PLoS Genet , vol.2
    • Pennings, P.1    Hermisson, J.2
  • 27
    • 34548061302 scopus 로고    scopus 로고
    • Approximating genealogies for partially linked neutral loci under a selective sweep
    • Pfaffelhuber P, Studeny A (2007) Approximating genealogies for partially linked neutral loci under a selective sweep. J Math Biol 55: 299-330.
    • (2007) J Math Biol , vol.55 , pp. 299-330
    • Pfaffelhuber, P.1    Studeny, A.2
  • 28
    • 7344226732 scopus 로고
    • The effect of strongly selected substitutions on neutral polymorphism: analytical results based on diffusion theory
    • Stephan W, Wiehe T, Lenz M (1992) The effect of strongly selected substitutions on neutral polymorphism: analytical results based on diffusion theory. Theor Popul Biol 41: 237-254.
    • (1992) Theor Popul Biol , vol.41 , pp. 237-254
    • Stephan, W.1    Wiehe, T.2    Lenz, M.3
  • 29
    • 33646180401 scopus 로고    scopus 로고
    • The hitchhiking effect on linkage disequilibrium between linked neutral loci
    • Stephan W, Song Y, Langley C (2006) The hitchhiking effect on linkage disequilibrium between linked neutral loci. Genetics 172: 2647-2663.
    • (2006) Genetics , vol.172 , pp. 2647-2663
    • Stephan, W.1    Song, Y.2    Langley, C.3
  • 30
    • 0021066244 scopus 로고
    • Evolutionary relationship of DN sequences in finite populations
    • Tajima F (1983) Evolutionary relationship of DN sequences in finite populations. Genetics 105: 437-460.
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 31
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 32
    • 33644778674 scopus 로고    scopus 로고
    • Directional positive selection on an allele of arbitrary dominance
    • Teshima K, Przeworski M (2006) Directional positive selection on an allele of arbitrary dominance. Genetics 172: 713-718.
    • (2006) Genetics , vol.172 , pp. 713-718
    • Teshima, K.1    Przeworski, M.2
  • 33
    • 33744815615 scopus 로고    scopus 로고
    • How reliable are empirical genomic scans for selective sweeps?
    • Teshima K, Coop G, Przeworski M (2006) How reliable are empirical genomic scans for selective sweeps?. Genome Res 16: 702-712.
    • (2006) Genome Res , vol.16 , pp. 702-712
    • Teshima, K.1    Coop, G.2    Przeworski, M.3
  • 34
    • 0036582076 scopus 로고    scopus 로고
    • Extinction time and age of an allele in a large finite population
    • van Herwaarden O, van der Wal N (2002) Extinction time and age of an allele in a large finite population. Theor Popul Biol 61: 311-318.
    • (2002) Theor Popul Biol , vol.61 , pp. 311-318
    • van Herwaarden, O.1    van der Wal, N.2
  • 35
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson G (1975) On the number of segregating sites in genetical models without recombination. Theor Popul Biol 7: 256-276.
    • (1975) Theor Popul Biol , vol.7 , pp. 256-276
    • Watterson, G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.