메뉴 건너뛰기




Volumn 55, Issue 3, 2007, Pages 299-330

Approximating genealogies for partially linked neutral loci under a selective sweep

Author keywords

Ancestral recombination graph; Diffusion approximation; Genetic hitchhiking; Random background; Selective sweep; Yule process

Indexed keywords

ALGORITHM; ALLELE; ANIMAL; ARTICLE; BIOLOGICAL MODEL; GENE LINKAGE DISEQUILIBRIUM; GENETIC LINKAGE; GENETIC RECOMBINATION; GENETIC SELECTION; GENETIC VARIABILITY; GENETICS; HAPLOIDY; METHODOLOGY; PEDIGREE; POPULATION GENETICS; PROBABILITY;

EID: 34548061302     PISSN: 03036812     EISSN: 14321416     Source Type: Journal    
DOI: 10.1007/s00285-007-0085-7     Document Type: Article
Times cited : (11)

References (26)
  • 1
    • 0031673084 scopus 로고    scopus 로고
    • The effect of hitch-hiking on neutral genealogies
    • Barton N. (1998). The effect of hitch-hiking on neutral genealogies. Gen. Res. 72: 123-133
    • (1998) Gen. Res. , vol.72 , pp. 123-133
    • Barton, N.1
  • 2
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • International HapMap Consortium
    • International HapMap Consortium. A haplotype map of the human genome. Nature 437(7063), 1299-1320 (2005)
    • (2005) Nature , vol.437 , Issue.7063 , pp. 1299-1320
  • 4
    • 0010800576 scopus 로고
    • Weighted occupation time for branching particle systems and a representation for the supercritical superprocess
    • 2
    • Evans S.N., O'Connell N. (1994). Weighted occupation time for branching particle systems and a representation for the supercritical superprocess. Can. Math. Bull. 37(2): 187-196
    • (1994) Can. Math. Bull. , vol.37 , pp. 187-196
    • Evans, S.N.1    O'Connell, N.2
  • 6
    • 0033911640 scopus 로고    scopus 로고
    • Hitchhiking under positive darwinian selection
    • Fay J.C., Wu C.-I. (2000). Hitchhiking under positive darwinian selection. Genetics 155: 1405-1413
    • (2000) Genetics , vol.155 , pp. 1405-1413
    • Fay, J.C.1    Wu, C.-I.2
  • 8
    • 0345274562 scopus 로고    scopus 로고
    • The frequency spectrum of a mutation and its age, in a general diffusion model
    • 2
    • Griffiths R.C. (2003). The frequency spectrum of a mutation and its age, in a general diffusion model. Theo. Pop. Biol. 64(2): 241-251
    • (2003) Theo. Pop. Biol. , vol.64 , pp. 241-251
    • Griffiths, R.C.1
  • 9
    • 0020744702 scopus 로고
    • Properties of a neutral allele model with intragenic recombination
    • Hudson R.R. (1983). Properties of a neutral allele model with intragenic recombination. Theo. Pop. Biol. 23: 183-201
    • (1983) Theo. Pop. Biol. , vol.23 , pp. 183-201
    • Hudson, R.R.1
  • 10
    • 0023815589 scopus 로고
    • The coalescent process in models with selection
    • Kaplan N.L., Darden T., Hudson R.R. (1988). The coalescent process in models with selection. Genetics 120: 819-829
    • (1988) Genetics , vol.120 , pp. 819-829
    • Kaplan, N.L.1    Darden, T.2    Hudson, R.R.3
  • 11
    • 0024372736 scopus 로고
    • The 'Hitchhiking effect' revisited
    • Kaplan N.L., Hudson R.R., Langley C.H. (1989). The 'Hitchhiking effect' revisited. Genetics 123: 887-899
    • (1989) Genetics , vol.123 , pp. 887-899
    • Kaplan, N.L.1    Hudson, R.R.2    Langley, C.H.3
  • 13
    • 0036189827 scopus 로고    scopus 로고
    • Detecting a local signature of genetic hitchhiking along a recombining chromosome
    • Kim Y., Stephan W. (2002). Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765-777
    • (2002) Genetics , vol.160 , pp. 765-777
    • Kim, Y.1    Stephan, W.2
  • 15
    • 0002907949 scopus 로고
    • The interaction of selection and linkage. I. General considerations; Heterotic models
    • Lewontin R.C. (1964). The interaction of selection and linkage. I. General considerations; Heterotic models. Genetics 49: 49-67
    • (1964) Genetics , vol.49 , pp. 49-67
    • Lewontin, R.C.1
  • 16
    • 26444508054 scopus 로고    scopus 로고
    • Maximum-likelihood methods for detecting recent positive selection and localizing the selected site in a genome
    • Li H., Stephan W. (2005). Maximum-likelihood methods for detecting recent positive selection and localizing the selected site in a genome. Genetics 171: 377-384
    • (2005) Genetics , vol.171 , pp. 377-384
    • Li, H.1    Stephan, W.2
  • 17
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favorable gene
    • Maynard Smith J., Haigh J. (1974). The hitch-hiking effect of a favorable gene. Gen. Res. 23: 23-35
    • (1974) Gen. Res. , vol.23 , pp. 23-35
    • Maynard Smith, J.1    Haigh, J.2
  • 20
    • 21344496367 scopus 로고
    • Yule process approximaion for the skeleton of a branching process
    • O'Connell N. (1993). Yule process approximaion for the skeleton of a branching process. J. Appl. Prob. 30: 725-729
    • (1993) J. Appl. Prob. , vol.30 , pp. 725-729
    • O'Connell, N.1
  • 21
    • 33845728921 scopus 로고    scopus 로고
    • Approximate genealogies under genetic hitchhiking
    • in press
    • Pfaffelhuber, P., Haubold, B., Wakolbinger, A.: Approximate genealogies under genetic hitchhiking. Genetics (2006, in press)
    • (2006) Genetics
    • Pfaffelhuber, P.1    Haubold, B.2    Wakolbinger, A.3
  • 22
    • 33645215107 scopus 로고    scopus 로고
    • Positive selection can create false hotspots of recombination
    • 3
    • Reed F.A., Tishkoff S.A. (2006). Positive selection can create false hotspots of recombination. Genetics 172(3): 2011-2014
    • (2006) Genetics , vol.172 , pp. 2011-2014
    • Reed, F.A.1    Tishkoff, S.A.2
  • 23
    • 0001085724 scopus 로고
    • On the genealogy of nested subsamples from a haploid population
    • Saunders I.W., Tavaré S., Watterson G.A. (1984). On the genealogy of nested subsamples from a haploid population. Adv. Appl. Probab. 16: 471-491
    • (1984) Adv. Appl. Probab. , vol.16 , pp. 471-491
    • Saunders, I.W.1    Tavaré, S.2    Watterson, G.A.3
  • 24
    • 32144441885 scopus 로고    scopus 로고
    • Random partitions approximating the coalescence of lineages during a selective sweep
    • Schweinsberg J., Durrett R. (2005). Random partitions approximating the coalescence of lineages during a selective sweep. Ann. Appl. Probab. 15: 1591-1651
    • (2005) Ann. Appl. Probab. , vol.15 , pp. 1591-1651
    • Schweinsberg, J.1    Durrett, R.2
  • 25
    • 33646180401 scopus 로고    scopus 로고
    • The hitchhiking effect on linkage disequilibrium between linked neutral loci
    • Stephan W., Song Y., Langley C. (2006). The hitchhiking effect on linkage disequilibrium between linked neutral loci. Genetics 172: 2647-2663
    • (2006) Genetics , vol.172 , pp. 2647-2663
    • Stephan, W.1    Song, Y.2    Langley, C.3
  • 26
    • 7344226732 scopus 로고
    • The effect of strongly selected substitutions on neutral polymorphism: Analytical results based on diffusion theory
    • Stephan W., Wiehe T., Lenz M. (1992). The effect of strongly selected substitutions on neutral polymorphism: analytical results based on diffusion theory. Theo. Pop. Biol. 41: 237-254
    • (1992) Theo. Pop. Biol. , vol.41 , pp. 237-254
    • Stephan, W.1    Wiehe, T.2    Lenz, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.