Evaluating differentiation propensity of in-house derived human embryonic stem cell lines KIND-1 and KIND-2

In Vitro Cellular and Developmental Biology - Animal

Volumn 47, Issue 5-6, 2011, Pages 406-419

  Nagvenkar, Punam ^a   Pethe, Prasad ^a   Pawani, Harsha ^a   Telang, Jyoti ^a   Kumar, Neeraj ^a   Hinduja, Indira ^b   Zaveri, Kusum ^b   Bhartiya, Deepa ^a  

^a NATIONAL INSTITUTE FOR RESEARCH IN REPRODUCTIVE HEALTH   (India)

^b Inkus IVF Centre   (India)

Author keywords

Differentiation; Embryoid body; Human embryonic stem cell lines; Propensity

Indexed keywords

ANIMAL; ARTICLE; CELL DIFFERENTIATION; CELL LINE; CELL LINEAGE; CELL PROLIFERATION; CULTURE TECHNIQUE; CYTOLOGY; EMBRYOID BODY; EMBRYONIC STEM CELL; HUMAN; METABOLISM; MOUSE;

ANIMALS; CELL CULTURE TECHNIQUES; CELL DIFFERENTIATION; CELL LINE; CELL LINEAGE; CELL PROLIFERATION; EMBRYOID BODIES; EMBRYONIC STEM CELLS; HUMANS; MICE;

EID: 80051664687     PISSN: 10712690     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11626-011-9420-9     Document Type: Article

References (59)

1. Abeyta M. J.; Clark A. T.; Rodriguez R. T.; Bodnar M. S.; Pera R. A.; Firpo M. T. Unique gene expression signatures of independentlyderived human embryonic stem cell lines. Hum. Mol. Genet. 13: 601-608; 2004. (Pubitemid 38386590)
2. Arai A.; Yamamoto K.; Toyama J. Murine cardiac progenitor cells require visceral embryonic endoderm and primitive streak for terminal differentiation. Dev. Dyn. 210: 344-353; 1997. (Pubitemid 27498154)
3. Atlasi Y.; Mowla S. J.; Ziaee S. A.; Gokhale P. J.; Andrews P. W. OCT4 spliced variants are differentially expressed in human pluripotent and non-pluripotent cells. Stem Cells 26: 3068-3074; 2008.
4. Bain G.; Kitchens D.; Yao M.; Huettner J. E.; Gottlieb D. Embryonic stem cells express neuronal properties in vitro. Dev. Biol. 168: 342-357; 1995.
5. Beqqali A.; Kloots J.; Ward-van Oostwaard D.; Mummery C.; Passier R. Genome-wide transcriptional profiling of human embryonic stem cells differentiating to cardiomyocytes. Stem Cells 24: 1956-1967; 2006. (Pubitemid 44474172)
6. Bhattacharya B.; Cai J.; Luo Y.; Miura T.; Mejido J.; Brimble S. N.; Zeng X.; Schulz T. C.; Rao M. S.; Puri R. K. Comparison of the gene expression profile of undifferentiated human embryonic stem cell lines and differentiating embryoid bodies. BMC Dev. Biol. 5: 22; 2005.
7. Bhattacharya B.; Puri S.; Puri R. K. A review of gene expression profiling of human embryonic stem cell lines and their differentiated progeny. Curr. Stem Cell Res. Ther. 4: 98-106; 2009.
8. Bibikova M.; Chudin E.; Wu B.; Zhou L.; Garcia E. W.; Liu Y.; Shin S.; Plaia T. W.; Auerbach J. M.; Arking D. E.; Gonzalez R.; Crook J.; Davidson B.; Schulz T. C.; Robins A.; Khanna A.; Sartipy P.; Hyllner J.; Vanguri P.; Savant-Bhonsale S.; Smith A. K.; Chakravarti A.; Maitra A.; Rao M.; Barker D. L.; Loring J. F.; Fan J. B. Human embryonic stem cells have a unique epigenetic signature. Genome Res. 16: 1075-1083; 2006. (Pubitemid 44320394)
9. Burridge P. W.; Anderson D.; Priddle H.; Barbadillo Munoz M. D.; Chamberlain S.; Allegrucci C.; Young L. E.; Denning C. Improved human embryonic stem cell embryoid body homogeneity and cardiomyocyte differentiation from a novel V-96 plate aggregation system highlights interline variability. Stem Cells 25: 929-938; 2007. (Pubitemid 46572590)
10. Chen H. F.; Kuo H. C.; Chien C. L.; Shun C. T.; Yao Y. L.; Ip P. L.; Chuang C. Y.; Wang C. C.; Yang Y. S.; Ho H. N. Derivation, characterization and differentiation of human embryonic stem cells: comparing serum-containing versus serum-free media and evidence of germ cell differentiation. Hum. Reprod. 22: 567-577; 2007.
11. D'Amour K. A.; Bang A. G.; Eliazer S.; Kelly O. G.; Agulnick A. D.; Smart N. G.; Moorman M. A.; Kronn E.; Carpenter M. K.; Baetge E. E. Production of pancreatic hormone-expressing endocrine cells from human embryonic stem cells. Nat. Biotechnol. 24: 1392-1401; 2006. (Pubitemid 44722103)
12. Denning C.; Allegrucci C.; Priddle H.; Barbadillo-Munoz M. D.; Anderson D.; Self T.; Smith N. M.; Parkin C. T.; Young L. E. Common culture conditions for maintenance and cardiomyocyte differentiation of the human embryonic stem cell lines, BG01 and HUES-7. Int. J. Dev. Biol. 50: 27-37; 2006. (Pubitemid 43145107)
13. Feki A.; Hovatta O.; Jaconi M. Letter to the Editor: Derivation of human embryonic stem cell lines from single cells of 4-cell stage embryos: be aware of the risks. Hum. Reprod. 23: 2874; 2008.
14. Gan Q.; Yoshida T.; McDonald O. G.; Owens G. K. Concise review: epigenetic mechanisms contribute to pluripotency and cell lineage determination of embryonic stem cells. Stem Cells 25: 2-9; 2007. (Pubitemid 46052969)
15. Geens M.; Mateizel I.; Sermon K.; De Rycke M.; Spits C.; Cauffman G.; Devroey P.; Tournaye H.; Liebaers I.; Van de Velde H. Human embryonic stem cell lines derived from single blastomeres of two 4-cell stage embryos. Hum. Reprod. 24: 2709-2717; 2009.
16. Hart A. H.; Hartley L.; Ibrahim M.; Robb L. Identification, cloning and expression analysis of the pluripotency promoting Nanog genes in mouse and human. Dev. Dyn. 230: 187-198; 2004. (Pubitemid 38544086)
17. Hoffman L. M.; Carpenter M. K. Human embryonic stem cell stability. Stem Cell Rev. 1: 139-144; 2005. (Pubitemid 43074198)
18. Hoffman L. M.; Hall L.; Batten J. L.; Young H.; Pardasani D.; Baetge E. E.; Lawrence J.; Carpenter M. K. X-inactivation status varies in human embryonic stem cell lines. Stem Cells 23: 1468-1478; 2005. (Pubitemid 41740996)
19. Hyslop L.; Stojkovic M.; Armstrong L.; Walter T.; Stojkovic P.; Przyborski S.; Herbert M.; Murdoch A.; Strachan T.; Lako M. Downregulation of NANOG induces differentiation of human embryonic stem cells to extraembryonic lineages. Stem Cells 23: 1035-1043; 2005. (Pubitemid 41377718)
20. Inamdar M. S.; Venu P.; Srinivas M. S.; Rao K.; VijayRaghavan K. Derivation and characterization of two sibling human embryonic stem cell lines from discarded grade III embryos. Stem Cells Dev. 18: 423-433; 2009.
21. Kim S. E.; Kim B. K.; Gil J. E.; Kim S. K.; Kim J. H. Comparative analysis of the developmental competence of three human embryonic stem cell lines in vitro. Mol. Cells 23: 49-56; 2007.
22. Klimanskaya I.; Chung Y.; Becker S.; Lu S. J.; Lanza R. Derivation of human embryonic stem cells from single blastomeres. Nat. Protoc. 2: 1963-1972; 2007. (Pubitemid 47308135)
23. Kumar N.; Hinduja I.; Nagvenkar P.; Pillai L.; Zaveri K.; Mukadam L.; Telang J.; Desai S.; Mangoli V.; Mangoli R.; Padgaonkar S.; Kaur G.; Puri C.; Bhartiya D. Derivation and characterization of two genetically unique human embryonic stem cell Lines on inhouse- derived human feeders. Stem Cells Dev. 18: 67-77; 2009.
24. Lagarkova M. A.; Volchkov P. Y.; Lyakisheva A. V.; Philonenko E. S.; Kiselev S. L. Diverse epigenetic profile of novel human embryonic stem cell lines. Cell Cycle 5: 416-420; 2006.
25. Lakshmipathy U.; Love B.; Adams C.; Thyagarajan B.; Chesnut J. D. Micro RNA profiling: an easy and rapid method to screen and characterize stem cell populations. Meth. Mol. Biol. 407: 97-114; 2007a.
26. Lakshmipathy U.; Love B.; Goff L. A.; Jornsten R.; Graichen R.; Hart R. P.; Chestnut J. D. MicroRNA expression pattern of undifferentiated and differentiated human embryonic stem cells. Stem Cells Dev. 16: 1003-1016; 2007b.
27. Li J. Y.; Pu M. T.; Hirasawa R.; Li B. Z.; Huang Y. N.; Zeng R.; Jing N. H.; Chen T.; Li E.; Sasaki H.; Xu G. L. Synergistic function of DNA methyltransferases Dnmt3a and Dnmt3b in the methylation of Oct4 and Nanog. Mol. Cell. Biol. 27: 8748-8759; 2007.
28. Loser P.; Schirm J.; Guhr A.; Wobus A. M.; Kurtz A. Human embryonic stem cell lines and their use in international research. Stem Cells 28: 240-246; 2010.
29. Lough J.; Sugi Y. Endoderm and heart development. Dev. Dyn. 217: 327-342; 2000. (Pubitemid 30185557)
30. Mandal A.; Bhowmik S.; Patki A.; Viswanathan C.; Majumdar A. S. Derivation, characterization, and gene expression profile of two new human ES cell lines from India. Stem Cell Res. 5: 173-187; 2010.
31. Mandal A.; Tipnis S.; Pal R.; Ravindran G.; Bose B.; Patki A.; Rao M. S.; Khanna A. Characterization and in vitro differentiation potential of a new human embryonic stem cell line, ReliCellhES1. Differentiation 74: 81-90; 2006. (Pubitemid 43376168)
32. Mehta A.; Mathew S.; Viswanathan C.; Sen Majumdar A. Intrinsic properties and external factors determine differentiation bias of human embryonic stem cell lines. Cell Biol. Int. 34: 1021-1031; 2010.
33. Mikkola M.; Olsson C.; Palgi J.; Ustinov J.; Palomaki; Horelli- Kuitunen N.; Knuutila S.; Lundin K.; Otonkoski T.; Tuuri T. Distinct differentiation characteristics of individual human embryonic stem cell lines. BMC Dev. Biol. 6: 40; 2006.
34. Mummery C.; Ward D.; Passier R. Differentiation of human embryonic stem cells to cardiomyocytes by co-culture with endoderm in serum-free medium. Curr. Protoc. Stem Cell Biol. Chap 1: Unit 1F.2; 2007.
35. Mummery C.; Ward-van Oostwaard D.; Doevendans P.; Spijker P.; van den Brink S.; Hassink R.; van der Heyden M.; Opthof T.; PeraM.; de la Riviere A. B.; Passier R.; Tertoolen L. Differentiation of human embryonic stem cells to cardiomyocytes: role of coculture with visceral endoderm-like cells. Circulation 107: 2733- 2740; 2003. (Pubitemid 36667249)
36. Nascone N.; Mercola M. An inductive role for the endoderm in Xenopus cardiogenesis. Development 121: 515-523; 1995.
37. Niwa H.; Miyazaki J.; Smith A. G. Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells. Nat. Genet. 24: 372-376; 2000. (Pubitemid 30187435)
38. Oh S. K.; Kim H. S.; Ahn H. J.; Seol H. W.; Kim Y. Y.; Park Y. B.; Yoon C. J.; Kim D. W.; Kim S. H.; Moon S. Y. Derivation and characterization of new human embryonic stem cell lines: SNUhES1, SNUhES2, and SNUhES3. Stem Cells 23: 211-219; 2005.
39. Osafune K.; Caron L.; Borowiak M.; Martinez R. J.; Fitz-Gerald C. S.; Sato Y.; Cowan C. A.; Chien K. R.; Melton D. A. Marked differences in differentiation propensity among human embryonic stem cell lines. Nat. Biotechnol. 26: 313-315; 2008. (Pubitemid 351355125)
40. Pal R.; Totey S.; Mamidi M. K.; Bhat V. S.; Totey S. Propensity of human embryonic stem cell lines during early stage of lineage specification controls their terminal differentiation into mature cell types. Exp. Biol. Med. 234: 1230-1243; 2009.
41. Park Y. B.; Kim Y. Y.; Oh S. K.; Chung S. G.; Ku S. Y.; Kim S. H.; Choi Y. M.; Moon S. Y. Alterations of proliferative and differentiation potentials of human embryonic stem cells during long-term culture. Exp. Mol. Med. 40: 98-108; 2008.
42. Pekkanen-Mattila M.; Kerkela E.; Tanskanen J. M.; Pietila M.; Pelto- Huikko M.; Hyttinen J.; Skottman H.; Suuronen R.; Aalto-Setala K. Substantial variation in the cardiac differentiation of human embryonic stem cell lines derived and propagated under the same conditions-a comparison of multiple cell lines. Ann. Med. 41: 360-370; 2009.
43. Pevny L. H.; Sockanathan S.; Placzek M.; Lovell-Badge R. A role of SOX1 in neural determination. Development 125: 1967- 1978; 1998.
44. Rohwedel J.; Maltsev V.; Bober E.; Arnold H. H.; Hescheler J.; Wobus A. M. Muscle cell differentiation of embryonic stem cells reflects myogenesis in vivo: developmentally regulated expression of myogenic determination genes and functional expression of ionic currents. Dev. Biol. 164: 87-101; 1994. (Pubitemid 24234337)
45. Saga Y.; Miyagawa-Tomita S.; Takagi A.; Kitajima S.; Miyazaki J.; Inoue I. MesP1 is expressed in the heart precursor cells and required for the formation of a single heart tube. Development 126: 3437-3447; 1999. (Pubitemid 29396783)
46. Schuldiner M.; Yanuka O.; Itskovitz-Eldor J.; Melton D. A.; Benvenisty N. Effects of eight growth factors on the differentiation of cells derived from human embryonic stem cells. PNAS 97: 11307-11312; 2000.
47. Schultheiss T. M.; Xydas S.; Lassar A. B. Induction of avian cardiac myogenesis by anterior endoderm. Development 121: 4203- 4214; 1995. (Pubitemid 26007371)
48. Skottman H.; Mikkola M.; Lundin K.; Olsson C.; Stromberg A. M.; Tuuri T.; Otonkoski T.; Hovatta O.; Lahesmaa R. Gene expression signatures of seven individual human embryonic stem cell lines. Stem Cells 23: 1343-1356; 2005. (Pubitemid 41504922)
49. Slager H. G.; Van Inzen W.; Freund E.; Van der Eijnden-Van Raaij A. J.; Mummery C. L. Transforming growth factor-beta in the early mouse embryo: implications for the regulation of muscle formation and implantation. Dev. Genet. 14: 212-224; 1993. (Pubitemid 23219920)
50. Strelchenko N.; Verlinsky O.; Kukharenko V.; Verlisnky Y. Moruladerived embryonic stem cells. Reprod. Biomed. Online 9: 623- 629; 2004.
51. Tavakoli T.; Xu X.; Derby E.; Serebryakova Y.; Reid Y.; Rao M. S.; Mattson M. P.; Ma W. Self-renewal and differentiation capabilities are variable between human embryonic stem cell lines I3, I6 and BG01V. BMC Cell Biol. 10: 44; 2009.
52. Thomson J. A.; Itskovitz-Eldor J.; Shapiro S. S.; Waknitz M. A.; Swiergiel J. J.;Marshall V. S.; Jones J. M. Embryonic stemcell lines derived from human blastocysts. Science 282: 1145-1147; 1998. (Pubitemid 28516247)
53. Tropepe V.; Hitoshi S.; Sirard C.; Mak T. W.; Rossant J.; van der Kooy D. Direct neural fate specification from embryonic stem cells: A primitive mammalian neural stem cell stage acquired through a default mechanism. Neuron 30: 65-78; 2001. (Pubitemid 32441677)
54. Venu P.; Chakraborty S.; Inamdar M. S. Analysis of long-term culture properties and pluripotent character of two sibling human embryonic stem cell lines derived from discarded embryos. In Vitro Cell. Dev. Biol. Anim. 46: 200-205; 2010.
55. Weitzer W. Embryonic stem cell-derived embryoid bodies: An in vitro model of eutherian pregastrulation development and early gastrulation. Handb. Exp. Pharmacol. 174: 21-51; 2006.
56. Yao S.; Chen S.; Clark J.; Hao E.; Beattie G. M.; Hayek A.; Ding S. Long-term self-renewal and directed differentiation of human embryonic stem cells in chemically defined conditions. PNAS 103: 6907-6912; 2006.
57. Zeineddine D.; Papadimou E.; Chebli K.; Gineste M.; Liu J.; Grey C.; Thurig S.; Behfar A.; Wallace V. A.; Skerjanc I. S.; Puceat M. Oct3/4 dose dependently regulates specification of embryonic stem cells towards a cardiac lineage and early heart development. Dev. Cell 11: 535-546; 2006. (Pubitemid 44430895)
58. Zhang X.; Stojkovic P.; Przyborski S.; Cooke M.; Armstrong L.; Lako M.; Stojkovic M. Derivation of human embryonic stem cells from developing and arrested embryos. Stem Cells 24: 2669-2676; 2006. (Pubitemid 46070118)
59. Zhou J.; Ou-Yang Q.; Li J.; Zhou X. Y.; Lin G.; Lu G. X. Human feeder cells support establishment and definitive endoderm differentiation of human embryonic stem cells. Stem Cells Dev. 17: 737-749; 2008.