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Volumn 10, Issue 40, 2011, Pages 7723-7726

Microsatellite markers: An important fingerprinting tool for characterization of crop plants

Author keywords

Allelic diversity; Co dominance; Genetic diversity; Microsatellites; Polymorphism; Simple sequence repeat

Indexed keywords

BARLEY; CODOMINANCE; CROP; DNA FINGERPRINTING; GENETIC MARKER; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GENOTYPE; MICROSATELLITE MARKER; NONHUMAN; PLANT BREEDING; PLANT GENOME; REVIEW; SIMPLE SEQUENCE REPEAT; SPECIES DIFFERENCE; WHEAT;

EID: 79961133782     PISSN: 16845315     EISSN: None     Source Type: Journal    
DOI: 10.5897/ajbx10.021     Document Type: Review
Times cited : (11)

References (54)
  • 1
    • 0031018376 scopus 로고    scopus 로고
    • Highly polymorphic microsatellites of rice consist of AT repeats, and a classification of closely related cultivars with these microsatellite loci
    • Akagi H, Yokozeki Y, Inagaki A, Fujimura T (1997). Highly polymorphic microsatellites of rice consist of AT repeats, and a classification of closely related cultivars with these microsatellite loci. Theor. Appl. Genet. 94: 61-67.
    • (1997) Theor. Appl. Genet , vol.94 , pp. 61-67
    • Akagi, H.1    Yokozeki, Y.2    Inagaki, A.3    Fujimura, T.4
  • 2
    • 0033120907 scopus 로고    scopus 로고
    • Application of restriction fragment fingerprinting with a rice microsatellite sequence to assembling rice YAC clones
    • Ashikawa I, Kurata N, Saji S, Umehara Y, Sasaki T (1999). Application of restriction fragment fingerprinting with a rice microsatellite sequence to assembling rice YAC clones. Genome, 42: 330-337.
    • (1999) Genome , vol.42 , pp. 330-337
    • Ashikawa, I.1    Kurata, N.2    Saji, S.3    Umehara, Y.4    Sasaki, T.5
  • 4
    • 0343049121 scopus 로고    scopus 로고
    • Molecular characterization of the genetic integrity of wheat (Triticum aestivum L.) germplasm after long-term maintenance
    • Borner A, Chebotar S, Korzun V (2000). Molecular characterization of the genetic integrity of wheat (Triticum aestivum L.) germplasm after long-term maintenance. Theor. Appl. Genet. 100: 494-497.
    • (2000) Theor. Appl. Genet , vol.100 , pp. 494-497
    • Borner, A.1    Chebotar, S.2    Korzun, V.3
  • 6
    • 0028146860 scopus 로고
    • Determination of evolutionary relationships among sheep breeds using microsatellites
    • Buchanan FC, Adams LJ, Littlejohn R.P, Maddox JF, Crawford AM (1994). Determination of evolutionary relationships among sheep breeds using microsatellites. Genomics, 22: 397-403.
    • (1994) Genomics , vol.22 , pp. 397-403
    • Buchanan, F.C.1    Adams, L.J.2    Littlejohn, R.P.3    Maddox, J.F.4    Crawford, A.M.5
  • 10
    • 0035739815 scopus 로고    scopus 로고
    • Preliminary analysis of microsatellite markers derived from sugarcane expressed sequence tags (ESTs)
    • Da Silva JAG (2001) Preliminary analysis of microsatellite markers derived from sugarcane expressed sequence tags (ESTs). Genet. Mol. Biol. 24: 1-4.
    • (2001) Genet. Mol. Biol , vol.24 , pp. 1-4
    • da Silva, J.A.G.1
  • 11
    • 0034524275 scopus 로고    scopus 로고
    • Sequence variations at a complex microsatellite locus in rice and its conservation in cereals
    • Davierwala AP, Ramakrishna W, Ranjekar PK, Gupta VS (2000). Sequence variations at a complex microsatellite locus in rice and its conservation in cereals. Theor. Appl. Genet. 101(8): 1291-1298.
    • (2000) Theor. Appl. Genet , vol.101 , Issue.8 , pp. 1291-1298
    • Davierwala, A.P.1    Ramakrishna, W.2    Ranjekar, P.K.3    Gupta, V.S.4
  • 12
    • 0031773382 scopus 로고    scopus 로고
    • Genetic linkage map of peach (Prunus persica L. Batsch) using morphological and molecular markers
    • Dirlewanger E, Pronier V, Parvery C, Rothan C, Guye A, Monet R (1998). Genetic linkage map of peach (Prunus persica L. Batsch) using morphological and molecular markers. Theor. Appl. Genet. 97(5-6): 888-895.
    • (1998) Theor. Appl. Genet , vol.97 , Issue.5-6 , pp. 888-895
    • Dirlewanger, E.1    Pronier, V.2    Parvery, C.3    Rothan, C.4    Guye, A.5    Monet, R.6
  • 13
    • 0030775733 scopus 로고    scopus 로고
    • Automated sizing of fluorescent-labeled simple sequence repeat (SSR) markers to assay genetic variation in soybean
    • Diwan N, Cregan PB (1997). Automated sizing of fluorescent-labeled simple sequence repeat (SSR) markers to assay genetic variation in soybean. Theor. Appl. Genet. 95: 723-733.
    • (1997) Theor. Appl. Genet , vol.95 , pp. 723-733
    • Diwan, N.1    Cregan, P.B.2
  • 14
    • 0346949030 scopus 로고    scopus 로고
    • Isolation of EST-derived microsatellite markers for genotyping the A and B genomes of wheat
    • Eujayl I, Sorrells M, Baum M, Wolters P, Powell W (2002). Isolation of EST-derived microsatellite markers for genotyping the A and B genomes of wheat. Theor Appl Genet 104: 399-407.
    • (2002) Theor Appl Genet , vol.104 , pp. 399-407
    • Eujayl, I.1    Sorrells, M.2    Baum, M.3    Wolters, P.4    Powell, W.5
  • 16
    • 0029860985 scopus 로고    scopus 로고
    • Single locus microsatellites isolated using 5~-anchored PCR
    • Fisher PJ, Gardner RC, Richardson TE (1996). Single locus microsatellites isolated using 5~-anchored PCR. Nucleic Acids. Res. 24: 4369-4371.
    • (1996) Nucleic Acids. Res , vol.24 , pp. 4369-4371
    • Fisher, P.J.1    Gardner, R.C.2    Richardson, T.E.3
  • 18
    • 0038060807 scopus 로고    scopus 로고
    • Microsatellites inPlants: A new class of molecular markers
    • Gupta PK, Balyan HS, Sharma PC, Ramesh B (1996). Microsatellites inPlants: A new class of molecular markers. Curr. Sci. 70(1): 45-54.
    • (1996) Curr. Sci , vol.70 , Issue.1 , pp. 45-54
    • Gupta, P.K.1    Balyan, H.S.2    Sharma, P.C.3    Ramesh, B.4
  • 19
    • 0033780256 scopus 로고    scopus 로고
    • Microsatellite markers-A new tool for distinguishing diploid wheat species
    • Hammer K (2000). Microsatellite markers-A new tool for distinguishing diploid wheat species. Genet. Resour. Crop Evol. 47: 497-505.
    • (2000) Genet. Resour. Crop Evol , vol.47 , pp. 497-505
    • Hammer, K.1
  • 20
    • 0033844607 scopus 로고    scopus 로고
    • Molecular mapping of the wheat powdery mildew resistance gene Pm24 and marker validation for molecular breeding
    • Huang XQ, Hsam SLK, Zeller FJ, Wenzel G, Mohler V (2000). Molecular mapping of the wheat powdery mildew resistance gene Pm24 and marker validation for molecular breeding. Theor. Appl. Genet. 101(3): 407-414.
    • (2000) Theor. Appl. Genet , vol.101 , Issue.3 , pp. 407-414
    • Huang, X.Q.1    Hsam, S.L.K.2    Zeller, F.J.3    Wenzel, G.4    Mohler, V.5
  • 21
    • 0036943335 scopus 로고    scopus 로고
    • Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers
    • Huang XQ, Bo Arner MS, Roder, Ganal MW (2002). Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers. Theor. Appl. Genet. 105: 699-707.
    • (2002) Theor. Appl. Genet , vol.105 , pp. 699-707
    • Huang, X.Q.1    Bo Arner, M.S.2    Roder3    Ganal, M.W.4
  • 22
    • 70349387823 scopus 로고    scopus 로고
    • Molecular characterization of wheat germplasm using microsatellite markers
    • Ijaz S, Khan IA (2009). Molecular characterization of wheat germplasm using microsatellite markers. Genet. Mol. Res. 8(3): 809-815.
    • (2009) Genet. Mol. Res , vol.8 , Issue.3 , pp. 809-815
    • Ijaz, S.1    Khan, I.A.2
  • 23
    • 0043015531 scopus 로고    scopus 로고
    • Microsatellites, from molecules to populations and back
    • Jarne P, Lagoda JL (1996). Microsatellites, from molecules to populations and back. Trends Ecol. Evol. 11: 424-429.
    • (1996) Trends Ecol. Evol , vol.11 , pp. 424-429
    • Jarne, P.1    Lagoda, J.L.2
  • 25
    • 0031081111 scopus 로고    scopus 로고
    • Simple sequence repeats as a source of quantitative genetic variation
    • Kashi Y, King D, Soller M (1997). Simple sequence repeats as a source of quantitative genetic variation. Trends Genet. 13: 74-78.
    • (1997) Trends Genet , vol.13 , pp. 74-78
    • Kashi, Y.1    King, D.2    Soller, M.3
  • 26
    • 0027947880 scopus 로고
    • Application of molecular methods and statistical analysis for discrimination of accessions and clones of vetiver grass
    • Kresovich S, Lamboy WF, Li R, Ren J, Szewc-McFadden AK, Blick SM (1994). Application of molecular methods and statistical analysis for discrimination of accessions and clones of vetiver grass. Crop Sci. 34: 804-809.
    • (1994) Crop Sci , vol.34 , pp. 804-809
    • Kresovich, S.1    Lamboy, W.F.2    Li, R.3    Ren, J.4    Szewc-McFadden, A.K.5    Blick, S.M.6
  • 27
    • 1542349036 scopus 로고    scopus 로고
    • Characterization and molecular genetic mapping of microsatellite loci in pepper
    • Lee JM, Nahm SH, Kim YM, Kim BD (2004). Characterization and molecular genetic mapping of microsatellite loci in pepper. Theor. Appl. Genet. 108: 619-627.
    • (2004) Theor. Appl. Genet , vol.108 , pp. 619-627
    • Lee, J.M.1    Nahm, S.H.2    Kim, Y.M.3    Kim, B.D.4
  • 28
    • 0032917842 scopus 로고    scopus 로고
    • An efficient micromethod of DNA isolation from mature leaves of four hardwood tree species Acer, Fraxinus, Prunus and Quercus
    • Lefort F, Douglas GC (1999). An efficient micromethod of DNA isolation from mature leaves of four hardwood tree species Acer, Fraxinus, Prunus and Quercus. Ann. Sci. For. 56: 259-263.
    • (1999) Ann. Sci. For , vol.56 , pp. 259-263
    • Lefort, F.1    Douglas, G.C.2
  • 29
    • 0029347005 scopus 로고
    • Microsatellite and amplified sequence length polymorphisms in cultivated and wild soybean
    • Maughan PJ, Saghai-Maroof MA, Buss GR (1995). Microsatellite and amplified sequence length polymorphisms in cultivated and wild soybean. Genome, 38: 715-772
    • (1995) Genome , vol.38 , pp. 715-772
    • Maughan, P.J.1    Saghai-Maroof, M.A.2    Buss, G.R.3
  • 32
    • 0036478903 scopus 로고    scopus 로고
    • Microsatellites are preferentially associated with non-repetitive DNA in plant genomes
    • Morgante M, Hanafey M, Powell W (2002). Microsatellites are preferentially associated with non-repetitive DNA in plant genomes. Nat. Genet. 30: 194-200.
    • (2002) Nat. Genet , vol.30 , pp. 194-200
    • Morgante, M.1    Hanafey, M.2    Powell, W.3
  • 33
    • 0030774605 scopus 로고    scopus 로고
    • Two microsatellite markers that flank the major soybean cyst nematode resistance locus
    • Mudge J, Cregan PB, Kenworthy JP, Orf JH, Young ND (1997). Two microsatellite markers that flank the major soybean cyst nematode resistance locus. Crop Sci. 37: 1611-1615.
    • (1997) Crop Sci , vol.37 , pp. 1611-1615
    • Mudge, J.1    Cregan, P.B.2    Kenworthy, J.P.3    Orf, J.H.4    Young, N.D.5
  • 34
    • 33644534125 scopus 로고    scopus 로고
    • EST-derived SSR markers from defined regions of wheat to identify Lophopyrum elongatum specific loci
    • Mullan JD, Amanda P, Natasha L, Rudi TA, Timothy DC, Joseph MA, Michael GF (2005). EST-derived SSR markers from defined regions of wheat to identify Lophopyrum elongatum specific loci. Genome, 48(12): 811-822.
    • (2005) Genome , vol.48 , Issue.12 , pp. 811-822
    • Mullan, J.D.1    Amanda, P.2    Natasha, L.3    Rudi, T.A.4    Timothy, D.C.5    Joseph, M.A.6    Michael, G.F.7
  • 35
    • 0141503284 scopus 로고    scopus 로고
    • Molecular marker based genetic diversity analysis in rice (Oryza sativa L.) using RAPD and SSR markers
    • Ravi M, Geethanjali S, Sameeyafarheen F, Maheswaran M (2003). Molecular marker based genetic diversity analysis in rice (Oryza sativa L.) using RAPD and SSR markers. Euphytica, 133: 243-252.
    • (2003) Euphytica , vol.133 , pp. 243-252
    • Ravi, M.1    Geethanjali, S.2    Sameeyafarheen, F.3    Maheswaran, M.4
  • 37
    • 23444454614 scopus 로고
    • Extraordinarily polymorphic microsatellite DNA in barley: Species diversity, chromosomal locations, and population dynamics
    • Saghai Maroof MA, Biyashev RM, Yang GP, Zhang Q, Allard RW (1994). Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. Proc. Natl. Acad. Sci. USA, 91: 5466-5470.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 5466-5470
    • Saghai Maroof, M.A.1    Biyashev, R.M.2    Yang, G.P.3    Zhang, Q.4    Allard, R.W.5
  • 38
    • 79961143001 scopus 로고    scopus 로고
    • Variability and evolution of microsatellite loci in cotton (Gossypium) diploid and polyploidy genomes
    • Conference, Town and Country Hotel, San Diego, C.A., January
    • Sayed NH, Hyeon SL, Minghua M, Peggy T, David MS, Feffrey Z (2001). Variability and evolution of microsatellite loci in cotton (Gossypium) diploid and polyploidy genomes. Chem. Plant and Animal Genome IX Conference, Town and Country Hotel, San Diego, C.A., January 13-17.
    • (2001) Chem , vol.9 , pp. 13-17
    • Sayed, N.H.1    Hyeon, S.L.2    Minghua, M.3    Peggy, T.4    David, M.S.5    Feffrey, Z.6
  • 39
    • 0026542473 scopus 로고
    • Slippage synthesis of simple sequence DNA
    • Schlotterer C, Tautz D (1992). Slippage synthesis of simple sequence DNA. Nucleic Acids Res. 20: 211-215.
    • (1992) Nucleic Acids Res , vol.20 , pp. 211-215
    • Schlotterer, C.1    Tautz, D.2
  • 41
    • 0031048901 scopus 로고    scopus 로고
    • Use of short microsatellites from data-base sequences to generate polymorphisms among Lycopersicon esculentum cultivars and accessions of other Lycopersicon species
    • Smulders MJM, Bredemeijer G, Kortekaas WR, Arens P, Vosman B (1997). Use of short microsatellites from data-base sequences to generate polymorphisms among Lycopersicon esculentum cultivars and accessions of other Lycopersicon species. Theor. Appl. Genet. 94: 264-272.
    • (1997) Theor. Appl. Genet , vol.94 , pp. 264-272
    • Smulders, M.J.M.1    Bredemeijer, G.2    Kortekaas, W.R.3    Arens, P.4    Vosman, B.5
  • 42
    • 0024387394 scopus 로고
    • Hypervariability of simple sequences as a general source for polymorphic DNA markers
    • Tautz D (1989). Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Res. 17: 6463-6471.
    • (1989) Nucleic Acids Res , vol.17 , pp. 6463-6471
    • Tautz, D.1
  • 44
    • 0037854629 scopus 로고    scopus 로고
    • Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
    • Thiel T, Michalek W, Varshney RK, Graner A (2003). Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor. Appl. Genet. 106: 411-422.
    • (2003) Theor. Appl. Genet , vol.106 , pp. 411-422
    • Thiel, T.1    Michalek, W.2    Varshney, R.K.3    Graner, A.4
  • 45
    • 34250073136 scopus 로고
    • Microsatellite repeats in grapevine reveal DNA polymorphisms when analyzed as sequence-tagged sites (STSs)
    • Thomas MR, Scott NS (1993). Microsatellite repeats in grapevine reveal DNA polymorphisms when analyzed as sequence-tagged sites (STSs). Theor. Appl. Genet. 86: 985-990.
    • (1993) Theor. Appl. Genet , vol.86 , pp. 985-990
    • Thomas, M.R.1    Scott, N.S.2
  • 46
    • 0029170185 scopus 로고
    • Identifying olive cultivars by isozyme analysis
    • Trujillo I, Rallo L, Arus P (1995). Identifying olive cultivars by isozyme analysis. J. Am. Soc. Hort. Sci. 120: 318-324.
    • (1995) J. Am. Soc. Hort. Sci , vol.120 , pp. 318-324
    • Trujillo, I.1    Rallo, L.2    Arus, P.3
  • 47
    • 0029240372 scopus 로고
    • Use of RAPD for the study of diversity within plant germplasm collections
    • Virk PS, Fordlloyd BV, Jackson MT, Newbury HJ (1995). Use of RAPD for the study of diversity within plant germplasm collections. Heredity, 97(2): 170-179.
    • (1995) Heredity , vol.97 , Issue.2 , pp. 170-179
    • Virk, P.S.1    Fordlloyd, B.V.2    Jackson, M.T.3    Newbury, H.J.4
  • 48
  • 49
    • 0024952506 scopus 로고
    • Restriction Fragment Length Polymorphism in Oryza sativa L
    • Wang ZY, Tanksley SD (1989). Restriction Fragment Length Polymorphism in Oryza sativa L. Genome, 32: 1113-1118.
    • (1989) Genome , vol.32 , pp. 1113-1118
    • Wang, Z.Y.1    Tanksley, S.D.2
  • 50
    • 0028970329 scopus 로고
    • Genomic fingerprinting by microsatellite-primed PCR: A critical evaluation
    • Weising K, Atkinson RG, Gardner RC (1995). Genomic fingerprinting by microsatellite-primed PCR: a critical evaluation. PCR Methods Appl. 4: 249-255.
    • (1995) PCR Methods Appl , vol.4 , pp. 249-255
    • Weising, K.1    Atkinson, R.G.2    Gardner, R.C.3
  • 52
    • 35648965729 scopus 로고    scopus 로고
    • Identification of major quantitative trait locus conditioning resistance to green bug biotype E in Sorghum PI 550610 using simple sequence repeat markers
    • YQ-Wu Y, Huang DR, Porter CG, Tauer L, Hollaway (2007). Identification of major quantitative trait locus conditioning resistance to green bug biotype E in Sorghum PI 550610 using simple sequence repeat markers. J Econ Entomol. 100(5): 1672-1678.
    • (2007) J Econ Entomol , vol.100 , Issue.5 , pp. 1672-1678
    • Yq-Wu, Y.1    Huang, D.R.2    Porter, C.G.3    Tauer, L.4
  • 54
    • 0036007439 scopus 로고    scopus 로고
    • Strategies for microsatellite isolation: A review
    • Zane L, Bargelloni L, Patarnello T (2002). Strategies for microsatellite isolation: a review. Mol. Ecol. 11: 1-16.
    • (2002) Mol. Ecol , vol.11 , pp. 1-16
    • Zane, L.1    Bargelloni, L.2    Patarnello, T.3


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