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Volumn 94, Issue 2, 1997, Pages 264-272

Use of short microsatellites from database sequences to generate polymorphisms among Lycopersicon esculentum cultivars and accessions of other Lycopersicon species

Author keywords

Sequence tagged microsatellite site; Simple sequence repeat; STMS; Tandem repeat; Variety identification

Indexed keywords

LYCOPERSICON ESCULENTUM;

EID: 0031048901     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050409     Document Type: Article
Times cited : (265)

References (39)
  • 2
    • 0028055069 scopus 로고
    • Assignment of 30 microsatellite loci to the linkage map of Arabidopsis
    • Bell CJ, Ecker JR (1994) Assignment of 30 microsatellite loci to the linkage map of Arabidopsis. Genomics 19:137-144
    • (1994) Genomics , vol.19 , pp. 137-144
    • Bell, C.J.1    Ecker, J.R.2
  • 3
    • 0001741062 scopus 로고
    • Genetics of actin-related sequences in tomato
    • Bernatzky R, Tanksley SD (1986) Genetics of actin-related sequences in tomato. Theor Appl Genet 72:314-321
    • (1986) Theor Appl Genet , vol.72 , pp. 314-321
    • Bernatzky, R.1    Tanksley, S.D.2
  • 4
    • 0029671228 scopus 로고    scopus 로고
    • Characterization and genetic mapping of simple repeat sequences in the tomato genome
    • Broun P, Tanksley SD (1996) Characterization and genetic mapping of simple repeat sequences in the tomato genome. Mol Gen Genet 250:39-49
    • (1996) Mol Gen Genet , vol.250 , pp. 39-49
    • Broun, P.1    Tanksley, S.D.2
  • 6
    • 0000668808 scopus 로고
    • Polymerase-chain-reaction (PCR) analysis of microsatellites: A new approach to studies of genetic relationships in birds
    • Ellegren H (1992) Polymerase-chain-reaction (PCR) analysis of microsatellites: a new approach to studies of genetic relationships in birds. The Auk 109:886-895
    • (1992) The Auk , vol.109 , pp. 886-895
    • Ellegren, H.1
  • 7
    • 0027318997 scopus 로고
    • DNA typing with fluorescently tagged short tandem repeats: A sensitive and accurate approach to human identification
    • Frégeau CJ, Fourney RM (1993) DNA typing with fluorescently tagged short tandem repeats: a sensitive and accurate approach to human identification. Biotechniques 15:100-119
    • (1993) Biotechniques , vol.15 , pp. 100-119
    • Frégeau, C.J.1    Fourney, R.M.2
  • 9
    • 0027203346 scopus 로고
    • Dinucleotide repeat polymorphisms isolated by the polymerase chain reaction
    • Grist SA, Firgaira FA, Morley AA (1993) Dinucleotide repeat polymorphisms isolated by the polymerase chain reaction. BioTechniques 15:304-309
    • (1993) BioTechniques , vol.15 , pp. 304-309
    • Grist, S.A.1    Firgaira, F.A.2    Morley, A.A.3
  • 10
    • 2742558049 scopus 로고
    • A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes
    • Hamada H, Petrino MG, Kakunaga T (1982) A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes. Proc Natl Acad Sci USA 79:6465-6469
    • (1982) Proc Natl Acad Sci USA , vol.79 , pp. 6465-6469
    • Hamada, H.1    Petrino, M.G.2    Kakunaga, T.3
  • 11
    • 0021711842 scopus 로고
    • Characterization of genomic poly(dT-dG) poly(dC-dA) sequences: Structure, organization and conformation
    • Hamada H, Petrino MG, Kakunaga T, Seidman M, Stollar BD (1984) Characterization of genomic poly(dT-dG) poly(dC-dA) sequences: structure, organization and conformation. Mol Cell Biol 4:2610-2621
    • (1984) Mol Cell Biol , vol.4 , pp. 2610-2621
    • Hamada, H.1    Petrino, M.G.2    Kakunaga, T.3    Seidman, M.4    Stollar, B.D.5
  • 12
    • 0003377778 scopus 로고
    • Abundance and characterization of simple-sequence repeats (SSRs) isolated from a size-fractionated genomic library of Brassica napus L. (rapeseed)
    • Kresovich S, Szewc-McFadden AK, Bliek SM, McFerson JR (1995) Abundance and characterization of simple-sequence repeats (SSRs) isolated from a size-fractionated genomic library of Brassica napus L. (rapeseed). Theor Appl Genet 91:206-211
    • (1995) Theor Appl Genet , vol.91 , pp. 206-211
    • Kresovich, S.1    Szewc-McFadden, A.K.2    Bliek, S.M.3    McFerson, J.R.4
  • 13
    • 0027285192 scopus 로고
    • The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates
    • Lagercrantz U, Ellegren H, Andersson L (1993) The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates. Nucleic Acids Res 21:1111-1115
    • (1993) Nucleic Acids Res , vol.21 , pp. 1111-1115
    • Lagercrantz, U.1    Ellegren, H.2    Andersson, L.3
  • 14
    • 0028312154 scopus 로고
    • Methodology of generation and characteristics of simple sequence repeat DNA markers in avocado (Persea americana M.)
    • Lavi U, Akkaya M, Bhagwat A, Lahav E, Cregan PB (1994) Methodology of generation and characteristics of simple sequence repeat DNA markers in avocado (Persea americana M.). Euphytica 80:171-177
    • (1994) Euphytica , vol.80 , pp. 171-177
    • Lavi, U.1    Akkaya, M.2    Bhagwat, A.3    Lahav, E.4    Cregan, P.B.5
  • 15
    • 0025354122 scopus 로고
    • Towards construction of a high-resolution map of the mouse genome using PCR-analysed microsatellites
    • Love JM, Knight AM, McAleer MA, Todd JA (1990) Towards construction of a high-resolution map of the mouse genome using PCR-analysed microsatellites. Nucleic Acids Res 18:4123-4130
    • (1990) Nucleic Acids Res , vol.18 , pp. 4123-4130
    • Love, J.M.1    Knight, A.M.2    McAleer, M.A.3    Todd, J.A.4
  • 16
    • 0027138203 scopus 로고
    • Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer
    • Lynn M, Heun M (1993) Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer. Genome 36:884-889
    • (1993) Genome , vol.36 , pp. 884-889
    • Lynn, M.1    Heun, M.2
  • 17
    • 0029347005 scopus 로고
    • Microsatellite and amplified sequence length polymorphisms in cultivated and wild soybean
    • Maughan PJ, Saghai Maroof MA, Buss GR (1995) Microsatellite and amplified sequence length polymorphisms in cultivated and wild soybean. Genome 38: 715-723
    • (1995) Genome , vol.38 , pp. 715-723
    • Maughan, P.J.1    Saghai Maroof, M.A.2    Buss, G.R.3
  • 18
    • 0001214694 scopus 로고
    • RFLP analysis of phylogenetic relationships and genetic variation in the genus Lycopersicon
    • Miller JC, Tanksley SD (1990) RFLP analysis of phylogenetic relationships and genetic variation in the genus Lycopersicon. Theor Appl Genet 80:437-448
    • (1990) Theor Appl Genet , vol.80 , pp. 437-448
    • Miller, J.C.1    Tanksley, S.D.2
  • 19
    • 0027178849 scopus 로고
    • Microsatellite repeats in pig (Sus domestica) and chicken (Gallus domesticus) genomes
    • Moran C (1993) Microsatellite repeats in pig (Sus domestica) and chicken (Gallus domesticus) genomes. J Hered 84:274-280
    • (1993) J Hered , vol.84 , pp. 274-280
    • Moran, C.1
  • 20
    • 0027357965 scopus 로고
    • PCR-amplified microsatellites as markers in plant genetics
    • Morgante M, Olivieri AM (1993) PCR-amplified microsatellites as markers in plant genetics. Plant J 3:175-182
    • (1993) Plant J , vol.3 , pp. 175-182
    • Morgante, M.1    Olivieri, A.M.2
  • 21
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson WR, Lipman DJ (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85:2444-2448
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 22
    • 0029168666 scopus 로고
    • Sequence conservation of microsatellites between Bos taurus (cattle), Capra hircus (goat) and related species. Examples of use in parentage testing and phylogeny analysis
    • Pépin L, Amigues Y, Lepingle A, Berthier JL, Bensaid A, Vaiman D (1995) Sequence conservation of microsatellites between Bos taurus (cattle), Capra hircus (goat) and related species. Examples of use in parentage testing and phylogeny analysis. Heredity 74:53-61
    • (1995) Heredity , vol.74 , pp. 53-61
    • Pépin, L.1    Amigues, Y.2    Lepingle, A.3    Berthier, J.L.4    Bensaid, A.5    Vaiman, D.6
  • 24
    • 0028039401 scopus 로고
    • Direct comparison of levels of genetic variation in tomato detected by a GACA-containing microsatellite probe and by random amplified polymorphic DNA
    • Rus-Kortekaas W, Smulders MJM, Arens P, Vosman B (1994) Direct comparison of levels of genetic variation in tomato detected by a GACA-containing microsatellite probe and by random amplified polymorphic DNA. Genome 37: 375-381
    • (1994) Genome , vol.37 , pp. 375-381
    • Rus-Kortekaas, W.1    Smulders, M.J.M.2    Arens, P.3    Vosman, B.4
  • 25
    • 85016734466 scopus 로고
    • The design and optimization of the PCR
    • Erlich HA (ed) Stockton Press, New York
    • Saiki K (1989) The design and optimization of the PCR. In: Erlich HA (ed) PCR Technology. Stockton Press, New York, pp 7-16
    • (1989) PCR Technology , pp. 7-16
    • Saiki, K.1
  • 26
    • 0026542473 scopus 로고
    • Slippage synthesis of simple sequence DNA
    • Schlötterer C, Tautz D (1992) Slippage synthesis of simple sequence DNA. Nucleic Acids Res 20:211-215
    • (1992) Nucleic Acids Res , vol.20 , pp. 211-215
    • Schlötterer, C.1    Tautz, D.2
  • 27
    • 0027932334 scopus 로고
    • Comparison of fluorescence-based semi-automated genotyping of multiple microsatellite loci with autoradiographic techniques
    • Schwengel DA, Jedlicka AE, Nanthakumar EJ, Weber JL, Levitt RC (1994) Comparison of fluorescence-based semi-automated genotyping of multiple microsatellite loci with autoradiographic techniques. Genomics 22:46-54
    • (1994) Genomics , vol.22 , pp. 46-54
    • Schwengel, D.A.1    Jedlicka, A.E.2    Nanthakumar, E.J.3    Weber, J.L.4    Levitt, R.C.5
  • 29
    • 0028675538 scopus 로고
    • Occurrence and inheritance of microsatellites in Pinus radiata
    • Smith DN, Devey ME (1994) Occurrence and inheritance of microsatellites in Pinus radiata. Genome 37:977-983
    • (1994) Genome , vol.37 , pp. 977-983
    • Smith, D.N.1    Devey, M.E.2
  • 30
    • 0028176566 scopus 로고
    • Distribution of trinucleotide microsatellites in different categories of mammalian genomic sequences: Implications for human genetic diseases
    • Stallings RL (1994) Distribution of trinucleotide microsatellites in different categories of mammalian genomic sequences: implications for human genetic diseases. Genomics 21:116-121
    • (1994) Genomics , vol.21 , pp. 116-121
    • Stallings, R.L.1
  • 31
    • 0028967381 scopus 로고
    • n microsatellite sequences at orthologous positions in diverse mammalian genomes
    • n microsatellite sequences at orthologous positions in diverse mammalian genomes. Genomics 25:107-113
    • (1995) Genomics , vol.25 , pp. 107-113
    • Stallings, R.L.1
  • 32
    • 34250073136 scopus 로고
    • Microsatellite repeats in grapevine reveal DNA polymorphisms when analyzed as sequence-tagged sites (STSs)
    • Thomas MR, Scott NS (1993) Microsatellite repeats in grapevine reveal DNA polymorphisms when analyzed as sequence-tagged sites (STSs). Theor Appl Genet 86:985-990
    • (1993) Theor Appl Genet , vol.86 , pp. 985-990
    • Thomas, M.R.1    Scott, N.S.2
  • 33
    • 7144240003 scopus 로고
    • Mapping strategy for resistance genes in tomato based on RFLPs between cultivars: CF9 (resistance to Cladosporium fulvum) on chromosome 1
    • Van der Beek H, Verkerk R, Zabel P, Lindhout P (1992) Mapping strategy for resistance genes in tomato based on RFLPs between cultivars: CF9 (resistance to Cladosporium fulvum) on chromosome 1. Theor Appl Genet 84:106-112
    • (1992) Theor Appl Genet , vol.84 , pp. 106-112
    • Van Der Beek, H.1    Verkerk, R.2    Zabel, P.3    Lindhout, P.4
  • 34
    • 0029609040 scopus 로고
    • Analysis of the genetic composition of anther-derived potato by randomly amplified polymorphic DNA and simple sequence repeats
    • Veilleux RE, Shen LY, Paz MM (1995) Analysis of the genetic composition of anther-derived potato by randomly amplified polymorphic DNA and simple sequence repeats. Genome 38:1153-1162
    • (1995) Genome , vol.38 , pp. 1153-1162
    • Veilleux, R.E.1    Shen, L.Y.2    Paz, M.M.3
  • 36
    • 0031062308 scopus 로고    scopus 로고
    • Molecular characterization of GATA /GACA microsatellite repeats in tomato
    • in press
    • Vosman B, Arens (1997) Molecular characterization of GATA /GACA microsatellite repeats in tomato. Genome (in press)
    • (1997) Genome
    • Vosman, B.1    Arens2
  • 38
    • 0024582686 scopus 로고
    • Abundant class of human polymorphisms which can be typed using the polymerase chain reaction
    • Weber JL, May PE (1989) Abundant class of human polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388-396
    • (1989) Am J Hum Genet , vol.44 , pp. 388-396
    • Weber, J.L.1    May, P.E.2
  • 39
    • 0025157834 scopus 로고
    • n polymorphisms
    • n polymorphisms. Genomics 7:524-530
    • (1990) Genomics , vol.7 , pp. 524-530
    • Weber, J.L.1


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