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Volumn 54, Issue 4, 2011, Pages 253-260

A satellite DNA evolutionary analysis in the North American endemic dioecious plant Rumex hastatulus (Polygonaceae)

Author keywords

concerted evolution; library hypothesis; Rumex hastatulus; satellite DNA; sex chromosomes

Indexed keywords

POLYGONACEAE; RUMEX; RUMEX HASTATULUS;

EID: 79960977298     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g10-115     Document Type: Article
Times cited : (21)

References (27)
  • 2
    • 36348945725 scopus 로고    scopus 로고
    • The evolution of sex chromosomes in the genus Rumex (Polygonaceae): Identification of a new species with heteromorphic sex chromosomes
    • DOI 10.1007/s10577-007-1166-6
    • Cuñado N. Navajas-Pérez R. de la Herrán R. Ruiz Rejón C. Ruiz Rejón M. Santos J.L. Garrido-Ramos M.A. 2007. The evolution of sex chromosomes in the genus Rumex (Polygonaceae): identification of a new species with heteromorphic sex chromosomes. Chromosome Res. 15 (7): 825-833. 10.1007/s10577-007-1166-6 17899410 (Pubitemid 350160089)
    • (2007) Chromosome Research , vol.15 , Issue.7 , pp. 825-832
    • Cunado, N.1    Navajas-Perez, R.2    De La Herran, R.3    Ruiz Rejon, C.4    Ruiz Rejon, M.5    Santos, J.L.6    Garrido-Ramos, M.A.7
  • 3
    • 0035754038 scopus 로고    scopus 로고
    • The molecular phylogeny of the Sparidae (Pisces, Perciformes) based on two satellite DNA families
    • DOI 10.1046/j.1365-2540.2001.00967.x
    • de la Herrán R. Rejon C.R. Rejon M.R. Garrido-Ramos M.A. 2001. The molecular phylogeny of the Sparidae (Pisces, Perciformes) based on two satellite DNA families. Heredity, 87 (6): 691-697. 10.1046/j.1365-2540.2001. 00967.x 11903564 (Pubitemid 34119511)
    • (2001) Heredity , vol.87 , Issue.6 , pp. 691-697
    • De La Herran, R.1    Ruiz Rejon, C.2    Ruiz Rejon, M.3    Garrido-Ramos, M.A.4
  • 4
    • 33645422749 scopus 로고
    • Contribution a l'étude cytotaxonomique des Rumex. IVLe genre Acetosa Mill
    • Degraeve N. 1976. Contribution a l'étude cytotaxonomique des Rumex. IVLe genre Acetosa Mill. Cellule, 71: 231-240.
    • (1976) Cellule , vol.71 , pp. 231-240
    • Degraeve, N.1
  • 5
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • 10.2307/2408678
    • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39 (4): 783-791. 10.2307/2408678
    • (1985) Evolution , vol.39 , Issue.4 , pp. 783-791
    • Felsenstein, J.1
  • 6
    • 0017668335 scopus 로고
    • Nucleotide sequences of HS-α satellite DNA from kangaroo rat Dipodomys ordii and characterization of similar sequences in other rodents
    • Fry K. Salser W. 1977. Nucleotide sequences of HS satellite DNA from kangaroo rat Dipodomys ordii and characterization of similar sequences in other rodents. Cell, 12 (4): 1069-1084. 10.1016/0092-8674(77)90170-2 597857 (Pubitemid 8236633)
    • (1977) Cell , vol.12 , Issue.4 , pp. 1069-1084
    • Fry, K.1    Salser, W.2
  • 7
    • 0002557518 scopus 로고    scopus 로고
    • Molecular clocks and nucleotide substitution rates in higher plants
    • Gaut B.S. 1998. Molecular clocks and nucleotide substitution rates in higher plants. Evol. Biol. 30: 93-120.
    • (1998) Evol. Biol. , vol.30 , pp. 93-120
    • Gaut, B.S.1
  • 8
    • 33646404343 scopus 로고    scopus 로고
    • Cloning and characterization of dispersed repetitive DNA derived from microdissected sex chromosomes of Rumex acetosa
    • 10.1139/G05-089 16498461
    • Mariotti B. Navajas-Pérez R. Lozano R. Parker J.S. delaHerrán R. Rejón C.R. 2006. Cloning and characterization of dispersed repetitive DNA derived from microdissected sex chromosomes of Rumex acetosa. Genome, 49 (2): 114-121. 10.1139/G05-089 16498461
    • (2006) Genome , vol.49 , Issue.2 , pp. 114-121
    • Mariotti, B.1    Navajas-Pérez, R.2    Lozano, R.3    Parker, J.S.4    Delaherrán, R.5    Rejón, C.R.6
  • 9
    • 61349119284 scopus 로고    scopus 로고
    • Accumulation of Y-specific satellite DNAs during the evolution of Rumex acetosa sex chromosomes
    • 10.1007/s00438-008-0405-7 19085011
    • Mariotti B. Manzano S. Kejnovsḱ E. Vyskot B. Jamilena M. 2009. Accumulation of Y-specific satellite DNAs during the evolution of Rumex acetosa sex chromosomes. Mol. Genet. Genomics, 281 (3): 249-259. 10.1007/s00438-008- 0405-7 19085011
    • (2009) Mol. Genet. Genomics , vol.281 , Issue.3 , pp. 249-259
    • Mariotti, B.1    Manzano, S.2    Kejnovský, E.3    Vyskot, B.4    Jamilena, M.5
  • 10
    • 0031903901 scopus 로고    scopus 로고
    • Evolution of satellite DNAs from the genus Palorus - Experimental evidence for the "library" hypothesis
    • 9718733
    • Meštrović N. Plohl M. Mravinac B. Ugarković O. 1998. Evolution of satellite DNAs from the genus Palorus - experimental evidence for the "library" hypothesis. Mol. Biol. Evol. 15 (8): 1062-1068. 9718733
    • (1998) Mol. Biol. Evol. , vol.15 , Issue.8 , pp. 1062-1068
    • Meštrović, N.1    Plohl, M.2    Mravinac, B.3    Ugarković, O.4
  • 11
    • 33750946255 scopus 로고    scopus 로고
    • Interplay of selective pressure and stochastic events directs evolution of the MEL172 satellite DNA library in root-knot nematodes
    • DOI 10.1093/molbev/msl119
    • Meštrović N. Castagnone-Sereno P. Plohl M. 2006. Interplay of selective pressure and stochastic events directs evolution of the MEL172 satellite DNA library in root-knot nematodes. Mol. Biol. Evol. 23 (12): 2316-2325. 10.1093/molbev/msl119 16982821 (Pubitemid 44737125)
    • (2006) Molecular Biology and Evolution , vol.23 , Issue.12 , pp. 2316-2325
    • Mestrovic, N.1    Castagnone-Sereno, P.2    Plohl, M.3
  • 12
    • 0036100317 scopus 로고    scopus 로고
    • Sequence of PRAT satellite DNA "frozen" in some coleopteran species
    • DOI 10.1007/s0023901-0079-9
    • Mravinac B. Plohl M. Meštrović N. Ugarković ?. 2002. Sequence of PRAT satellite DNA "frozen" in some Coleopteran species. J.Mol. Evol. 54 (6): 774-783. 10.1007/s0023901-0079-9 12029359 (Pubitemid 34553643)
    • (2002) Journal of Molecular Evolution , vol.54 , Issue.6 , pp. 774-783
    • Mravinac, B.1    Plohl, M.2    Mestrovic, N.3    UgarkovicD. Durdica4
  • 13
    • 23944441481 scopus 로고    scopus 로고
    • The evolution of reproductive systems and sex-determining mechanisms within Rumex (polygonaceae) inferred from nuclear and chloroplastidial sequence data
    • DOI 10.1093/molbev/msi186
    • Navajas-Pérez R. de la Herrán R. López González G. Jamilena M. Lozano R. Ruiz Rejón C. 2005 a. The evolution of reproductive systems and sex-determining mechanisms within Rumex (Polygonaceae) inferred from nuclear and chloroplastidial sequence data. Mol. Biol. Evol. 22 (9): 1929-1939. 10.1093/molbev/msi186 15944442 (Pubitemid 41191518)
    • (2005) Molecular Biology and Evolution , vol.22 , Issue.9 , pp. 1929-1939
    • Navajas-Perez, R.1    De La Herran, R.2    Gonzalez, G.L.3    Jamilena, M.4    Lozano, R.5    Rejon, C.R.6    Rejon, M.R.7    Garrido-Ramos, M.A.8
  • 15
    • 33344473035 scopus 로고    scopus 로고
    • The origin and evolution of the variability in a Y-specific satellite-DNA of Rumex acetosa and its relatives
    • DOI 10.1016/j.gene.2005.10.013, PII S0378111905006104
    • Navajas-Pérez R. Schwarzacher T. de la Herrán R. Ruiz Rejón C. Ruiz Rejón M. Garrido-Ramos M.A. 2006. The origin and evolution of the variability in a Y-specific satellite-DNA of Rumex acetosa and its relatives. Gene, 368: 61-71. 10.1016/j.gene.2005.10.013 16324803 (Pubitemid 43290143)
    • (2006) Gene , vol.368 , Issue.1-2 , pp. 61-71
    • Navajas-Perez, R.1    Schwarzacher, T.2    De La Herran, R.3    Ruiz Rejon, C.4    Ruiz Rejon, M.5    Garrido-Ramos, M.A.6
  • 16
    • 34147119653 scopus 로고    scopus 로고
    • SatDNA Analyzer: A computing tool for satellite-DNA evolutionary analysis
    • DOI 10.1093/bioinformatics/btm005
    • Navajas-Pérez R. Rubio-Escudero C. Aznarte J.L. Rejón M.R. Garrido-Ramos M.A. 2007. SatDNA Analyzer: a computing tool for satellite-DNA evolutionary analysis. Bioinformatics, 23 (6): 767-768. 10.1093/bioinformatics/ btm005 17242030 (Pubitemid 46554730)
    • (2007) Bioinformatics , vol.23 , Issue.6 , pp. 767-768
    • Navajas-Perez, R.1    Rubio-Escudero, C.2    Aznarte, J.L.3    Rejon, M.R.4    Garrido-Ramos, M.A.5
  • 18
    • 70350057184 scopus 로고    scopus 로고
    • Effect of location, organization, and repeat-copy number in satellite-DNA evolution
    • b. 10.1007/s00438-009-0472-4 19653004
    • Navajas-Pérez R. Quesada del Bosque M.E. Garrido-Ramos M.A. 2009. b. Effect of location, organization, and repeat-copy number in satellite-DNA evolution. Mol. Genet. Genomics, 282 (4): 395-406. 10.1007/s00438-009-0472-4 19653004
    • (2009) Mol. Genet. Genomics , vol.82 , Issue.4 , pp. 395-406
    • Navajas-Pérez, R.1    Quesada Del Bosque, M.E.2    Garrido-Ramos, M.A.3
  • 20
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada D. Crandall K.A. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics, 14 (9): 817-818. 10.1093/bioinformatics/14.9.817 9918953 (Pubitemid 28552116)
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 21
    • 0032843922 scopus 로고    scopus 로고
    • Chromosome painting of Y chromosomes and isolation of a Y chromosome-specific repetitive sequence in the dioecious plant Rumex acetosa
    • DOI 10.1007/s004120050377
    • Shibata F. Hizume M. Kuroki Y. 1999. Chromosome painting of Y chromosomes and isolation of a Y chromosome-specific repetitive sequence in the dioecious plant Rumex acetosa. Chromosoma, 108 (4): 266-270. 10.1007/s004120050377 10460415 (Pubitemid 29419505)
    • (1999) Chromosoma , vol.108 , Issue.4 , pp. 266-270
    • Shibata, F.1    Hizume, M.2    Kuroki, Y.3
  • 22
    • 0034019979 scopus 로고    scopus 로고
    • Differentiation and the polymorphic nature of the Y chromosomes revealed by repetitive sequences in the dioecious plant, Rumex acetosa
    • DOI 10.1023/A:1009252913344
    • Shibata F. Hizume M. Kuroki Y. 2000. Differentiation and the polymorphic nature of the Y chromosomes revealed by repetitive sequences in the dioecious plant, Rumex acetosa. Chromosome Res. 8 (3): 229-236. 10.1023/A:1009252913344 10841050 (Pubitemid 30261216)
    • (2000) Chromosome Research , vol.8 , Issue.3 , pp. 229-236
    • Shibata, F.1    Hizume, M.2    Kuroki, Y.3
  • 23
    • 0000106267 scopus 로고
    • The mechanism of sex determination in Rumex hastatulus
    • 17248184
    • Smith B.W. 1963. The mechanism of sex determination in Rumex hastatulus. Genetics, 48 (10): 1265-1288. 17248184
    • (1963) Genetics , vol.48 , Issue.10 , pp. 1265-1288
    • Smith, B.W.1
  • 24
    • 0001641284 scopus 로고
    • Evolution of sex-determining mechanisms in Rumex
    • Smith B.W. 1969. Evolution of sex-determining mechanisms in Rumex. Chromosomes Today, 2: 172-182.
    • (1969) Chromosomes Today , vol.2 , pp. 172-182
    • Smith, B.W.1
  • 25
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura K. Dudley J. Nei M. Kumar S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24 (8): 1596-1599. 10.1093/molbev/msm092 17488738 (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 26
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • Thompson J.D. Gibson T.J. Plewniak F. Jeanmougin F. Higgins D.G. 1997. The Clustal-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (24): 4876-4882. 10.1093/nar/25.24.4876 (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 27
    • 0002672044 scopus 로고
    • Recurrent patterns of chromosome variation in a species group
    • 10.1038/hdy.1988.90
    • Wilby A.S. Parker J.S. 1988. Recurrent patterns of chromosome variation in a species group. Heredity, 61 (1): 55-62. 10.1038/hdy.1988.90
    • (1988) Heredity , vol.61 , Issue.1 , pp. 55-62
    • Wilby, A.S.1    Parker, J.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.