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Volumn 175, Issue 3, 2011, Pages 384-393

Practical performance evaluation of a 10k×10k CCD for electron cryo-microscopy

Author keywords

10k 10k CCD; Charge coupled devices; Cryo EM; Electron cryo microscopy; Electron detection

Indexed keywords

ANALYTICAL EQUIPMENT; ARTICLE; BACTERIOPHAGE; CAMERA; CARBON FILM; CHARGED COUPLED DEVICE; CRYOELECTRON MICROSCOPY; DIGITAL IMAGING; ELECTRON MICROSCOPY; FILM; HYDRATION; IMAGE ANALYSIS; IMAGE RECONSTRUCTION; MACROMOLECULE; MODULATION TRANSFER FUNCTION; PHOTOGRAPHY; POWER SPECTRUM; PRIORITY JOURNAL; SIGNAL NOISE RATIO; STRUCTURE ANALYSIS; THREE DIMENSIONAL IMAGING;

EID: 79960911679     PISSN: 10478477     EISSN: 10958657     Source Type: Journal    
DOI: 10.1016/j.jsb.2011.05.012     Document Type: Article
Times cited : (12)

References (34)
  • 1
    • 76749153367 scopus 로고    scopus 로고
    • Radiation damage effects at four specimen temperatures from 4 to 100K
    • Bammes B.E., Jakana J., Schmid M.F., Chiu W. Radiation damage effects at four specimen temperatures from 4 to 100K. J. Struct. Biol. 2010, 169:331-341.
    • (2010) J. Struct. Biol. , vol.169 , pp. 331-341
    • Bammes, B.E.1    Jakana, J.2    Schmid, M.F.3    Chiu, W.4
  • 2
    • 16644365074 scopus 로고    scopus 로고
    • A 9Å single particle reconstruction from CCD captured images on a 200kV electron cryo-microscope
    • Booth C.R., Jiang W., Baker M.L., Zhou Z.H., Ludtke S.J., et al. A 9Å single particle reconstruction from CCD captured images on a 200kV electron cryo-microscope. J. Struct. Biol. 2004, 147:116-127.
    • (2004) J. Struct. Biol. , vol.147 , pp. 116-127
    • Booth, C.R.1    Jiang, W.2    Baker, M.L.3    Zhou, Z.H.4    Ludtke, S.J.5
  • 3
    • 33750997853 scopus 로고    scopus 로고
    • Assessing the capabilities of a 4k×4k CCD camera for electron cryo-microscopy
    • Booth C.R., Jakana J., Chiu W. Assessing the capabilities of a 4k×4k CCD camera for electron cryo-microscopy. J. Struct. Biol. 2006, 156:556-563.
    • (2006) J. Struct. Biol. , vol.156 , pp. 556-563
    • Booth, C.R.1    Jakana, J.2    Chiu, W.3
  • 4
    • 0028569793 scopus 로고
    • Applications of a slow-scan CCD camera in protein electron crystallography
    • Brink J., Chiu W. Applications of a slow-scan CCD camera in protein electron crystallography. J. Struct. Biol. 1994, 113:23-34.
    • (1994) J. Struct. Biol. , vol.113 , pp. 23-34
    • Brink, J.1    Chiu, W.2
  • 6
    • 45549095742 scopus 로고    scopus 로고
    • Achievable resolution from images of biological specimens acquired from a 4k×4k CCD camera in a 300-kV electron cryomicroscope
    • Chen D.H., Jakana J., Liu X., Schmid M.F., Chiu W. Achievable resolution from images of biological specimens acquired from a 4k×4k CCD camera in a 300-kV electron cryomicroscope. J. Struct. Biol. 2008, 163:45-52.
    • (2008) J. Struct. Biol. , vol.163 , pp. 45-52
    • Chen, D.H.1    Jakana, J.2    Liu, X.3    Schmid, M.F.4    Chiu, W.5
  • 7
    • 0032599786 scopus 로고    scopus 로고
    • Performance of a 2k CCD camera designed for electron crystallography at 400kV
    • Downing K.H., Hendrickson F.M. Performance of a 2k CCD camera designed for electron crystallography at 400kV. Ultramicroscopy 1999, 75:215-233.
    • (1999) Ultramicroscopy , vol.75 , pp. 215-233
    • Downing, K.H.1    Hendrickson, F.M.2
  • 8
    • 0033793451 scopus 로고    scopus 로고
    • CCD detectors in high-resolution biological electron microscopy
    • Faruqi A.R., Subramaniam S. CCD detectors in high-resolution biological electron microscopy. Quart. Rev. Biophys. 2000, 33:1-27.
    • (2000) Quart. Rev. Biophys. , vol.33 , pp. 1-27
    • Faruqi, A.R.1    Subramaniam, S.2
  • 11
    • 14844299785 scopus 로고    scopus 로고
    • Software extensions to UCSF chimera for interactive visualization of large molecular assemblies
    • Goddard T.D., Huang C.C., Ferrin T.E. Software extensions to UCSF chimera for interactive visualization of large molecular assemblies. Structure 2005, 13:473-482.
    • (2005) Structure , vol.13 , pp. 473-482
    • Goddard, T.D.1    Huang, C.C.2    Ferrin, T.E.3
  • 12
    • 0000313739 scopus 로고
    • Exact filters for general geometry three dimensional reconstruction
    • Harauz G., van Heel M. Exact filters for general geometry three dimensional reconstruction. Optik 1986, 73:146-156.
    • (1986) Optik , vol.73 , pp. 146-156
    • Harauz, G.1    van Heel, M.2
  • 13
    • 0028518917 scopus 로고
    • Coma-free alignment of a high-resolution electron microscope with threefold astigmatism
    • Ishizuka K. Coma-free alignment of a high-resolution electron microscope with threefold astigmatism. Ultramicroscopy 1994, 55:407-418.
    • (1994) Ultramicroscopy , vol.55 , pp. 407-418
    • Ishizuka, K.1
  • 15
    • 31844435708 scopus 로고    scopus 로고
    • Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus
    • Jiang W., Chang J., Jakana J., Weigele P., King J., et al. Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus. Nature 2006, 439:612-616.
    • (2006) Nature , vol.439 , pp. 612-616
    • Jiang, W.1    Chang, J.2    Jakana, J.3    Weigele, P.4    King, J.5
  • 16
    • 39849102970 scopus 로고    scopus 로고
    • Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy
    • Jiang W., Baker M.L., Jakana J., Weigele P.R., King J., et al. Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy. Nature 2008, 451:1130-1134.
    • (2008) Nature , vol.451 , pp. 1130-1134
    • Jiang, W.1    Baker, M.L.2    Jakana, J.3    Weigele, P.R.4    King, J.5
  • 18
    • 84856768179 scopus 로고    scopus 로고
    • 300kV performance of a 10k×10k scintillator- and fiber-coupled CCD camera for transmission electron microscopes
    • Lee B., Mollon B., Mooney P. 300kV performance of a 10k×10k scintillator- and fiber-coupled CCD camera for transmission electron microscopes. Microsc. Microanal. 2010, 16(S2):64-65.
    • (2010) Microsc. Microanal. , vol.16 , Issue.S2 , pp. 64-65
    • Lee, B.1    Mollon, B.2    Mooney, P.3
  • 19
    • 34548643898 scopus 로고    scopus 로고
    • Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a multi-path simulated annealing optimization algorithm
    • Liu X., Jiang W., Jakana J., Chiu W. Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a multi-path simulated annealing optimization algorithm. J. Struct. Biol. 2007, 160:11-27.
    • (2007) J. Struct. Biol. , vol.160 , pp. 11-27
    • Liu, X.1    Jiang, W.2    Jakana, J.3    Chiu, W.4
  • 20
    • 0033377664 scopus 로고    scopus 로고
    • EMAN: semi-automated software for high resolution single particle reconstructions
    • Ludtke S.J., Baldwin P.R., Chiu W. EMAN: semi-automated software for high resolution single particle reconstructions. J. Struct. Biol. 1999, 128:82-97.
    • (1999) J. Struct. Biol. , vol.128 , pp. 82-97
    • Ludtke, S.J.1    Baldwin, P.R.2    Chiu, W.3
  • 21
    • 40049105503 scopus 로고    scopus 로고
    • De novo backbone trace of GroEL from single particle electron cryomicroscopy
    • Ludtke S.J., Baker M.L., Chen D.H., Song J.L., Chuang D.T., et al. De novo backbone trace of GroEL from single particle electron cryomicroscopy. Structure 2008, 16:441-448.
    • (2008) Structure , vol.16 , pp. 441-448
    • Ludtke, S.J.1    Baker, M.L.2    Chen, D.H.3    Song, J.L.4    Chuang, D.T.5
  • 22
    • 67650544797 scopus 로고    scopus 로고
    • Detective quantum efficiency of electron area detectors in electron microscopy
    • McMullan G., Chen S., Henderson R., Faruqi A.R. Detective quantum efficiency of electron area detectors in electron microscopy. Ultramicroscopy 2009, 109:1126-1143.
    • (2009) Ultramicroscopy , vol.109 , pp. 1126-1143
    • McMullan, G.1    Chen, S.2    Henderson, R.3    Faruqi, A.R.4
  • 23
    • 0034193465 scopus 로고    scopus 로고
    • Characterisation of the signal and noise transfer of CCD cameras for electron detection
    • Meyer R.R., Kirkland A.I. Characterisation of the signal and noise transfer of CCD cameras for electron detection. Microsc. Res. Tech. 2000, 49:269-280.
    • (2000) Microsc. Res. Tech. , vol.49 , pp. 269-280
    • Meyer, R.R.1    Kirkland, A.I.2
  • 24
    • 77953538191 scopus 로고    scopus 로고
    • Characterization of a direct detection device imaging camera for transmission electron microscopy
    • Milazzo A.C., Moldovan G., Lanman J., Jin L., Bouwer J.C., et al. Characterization of a direct detection device imaging camera for transmission electron microscopy. Ultramicroscopy 2010, 110:744-747.
    • (2010) Ultramicroscopy , vol.110 , pp. 744-747
    • Milazzo, A.C.1    Moldovan, G.2    Lanman, J.3    Jin, L.4    Bouwer, J.C.5
  • 25
    • 33847192758 scopus 로고    scopus 로고
    • Optimization of image collection for cellular electron microscopy
    • Mooney P.E. Optimization of image collection for cellular electron microscopy. Methods Cell Biol. 2007, 79:661-719.
    • (2007) Methods Cell Biol. , vol.79 , pp. 661-719
    • Mooney, P.E.1
  • 26
    • 0031583477 scopus 로고    scopus 로고
    • Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15Å resolution by electron cryomicroscopy and angular reconstitution
    • Orlova E.V., Dube P., Harris J.R., Beckmann E., Zemlin F., Markl J., van Heel M. Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15Å resolution by electron cryomicroscopy and angular reconstitution. J. Mol. Biol. 1997, 271:417-437.
    • (1997) J. Mol. Biol. , vol.271 , pp. 417-437
    • Orlova, E.V.1    Dube, P.2    Harris, J.R.3    Beckmann, E.4    Zemlin, F.5    Markl, J.6    van Heel, M.7
  • 27
    • 0142042865 scopus 로고    scopus 로고
    • Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy
    • Rosenthal P.B., Henderson R. Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy. J. Mol. Biol. 2003, 333:721-745.
    • (2003) J. Mol. Biol. , vol.333 , pp. 721-745
    • Rosenthal, P.B.1    Henderson, R.2
  • 28
    • 0035782663 scopus 로고    scopus 로고
    • Fourier amplitude decay of electron cryomicroscopic images of single particles and effects on structure determination
    • Saad A., Ludtke S.J., Jakana J., Rixon F.J., Tsuruta H., et al. Fourier amplitude decay of electron cryomicroscopic images of single particles and effects on structure determination. J. Struct. Biol. 2001, 133:32-42.
    • (2001) J. Struct. Biol. , vol.133 , pp. 32-42
    • Saad, A.1    Ludtke, S.J.2    Jakana, J.3    Rixon, F.J.4    Tsuruta, H.5
  • 29
    • 20544469627 scopus 로고    scopus 로고
    • Advantages of CCD detectors for de novo three-dimensional structure determination in single-particle electron microscopy
    • Sander B., Golas M.M., Stark H. Advantages of CCD detectors for de novo three-dimensional structure determination in single-particle electron microscopy. J. Struct. Biol. 2005, 151:92-105.
    • (2005) J. Struct. Biol. , vol.151 , pp. 92-105
    • Sander, B.1    Golas, M.M.2    Stark, H.3
  • 30
    • 33845332754 scopus 로고    scopus 로고
    • EMAN2: an extensible image processing suite for electron microscopy
    • Tang G., Peng L., Baldwin P.R., Mann D.S., Jiang W., et al. EMAN2: an extensible image processing suite for electron microscopy. J. Struct. Biol. 2007, 157:38-46.
    • (2007) J. Struct. Biol. , vol.157 , pp. 38-46
    • Tang, G.1    Peng, L.2    Baldwin, P.R.3    Mann, D.S.4    Jiang, W.5
  • 31
    • 10744220292 scopus 로고    scopus 로고
    • Automated image acquisition and processing using a new generation of 4K×4K CCD cameras for cryo electron microscopic studies of macromolecular assemblies
    • Zhang P., Borgnia M.J., Mooney P., Shi D., Pan M., et al. Automated image acquisition and processing using a new generation of 4K×4K CCD cameras for cryo electron microscopic studies of macromolecular assemblies. J. Struct. Biol. 2003, 143:135-144.
    • (2003) J. Struct. Biol. , vol.143 , pp. 135-144
    • Zhang, P.1    Borgnia, M.J.2    Mooney, P.3    Shi, D.4    Pan, M.5
  • 32
    • 57149146986 scopus 로고    scopus 로고
    • JADAS: a customizable automated data acquisition system and its application to ice-embedded single particles
    • Zhang J., Nakamura N., Shimizu Y., Liang N., Liu X., et al. JADAS: a customizable automated data acquisition system and its application to ice-embedded single particles. J. Struct. Biol. 2009, 165:1-9.
    • (2009) J. Struct. Biol. , vol.165 , pp. 1-9
    • Zhang, J.1    Nakamura, N.2    Shimizu, Y.3    Liang, N.4    Liu, X.5
  • 33
    • 75149145980 scopus 로고    scopus 로고
    • Mechanism of folding chamber closure in a group II chaperonin
    • Zhang J., Baker M.L., Schröder G.F., Douglas N.R., Reissmann S., et al. Mechanism of folding chamber closure in a group II chaperonin. Nature 2010, 463:379-383.
    • (2010) Nature , vol.463 , pp. 379-383
    • Zhang, J.1    Baker, M.L.2    Schröder, G.F.3    Douglas, N.R.4    Reissmann, S.5
  • 34
    • 0027543395 scopus 로고
    • Prospects for using an IVEM with a FEG for imaging macromolecules towards atomic resolution
    • Zhou Z.H., Chiu W. Prospects for using an IVEM with a FEG for imaging macromolecules towards atomic resolution. Ultramicroscopy 1993, 49:407-416.
    • (1993) Ultramicroscopy , vol.49 , pp. 407-416
    • Zhou, Z.H.1    Chiu, W.2


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