Polymorphism of the goat agouti signaling protein gene and its relationship with coat color in Italian and Spanish breeds

Biochemical Genetics

Volumn 49, Issue 7-8, 2011, Pages 523-532

  Badaoui, B ^a   D'Andrea, M ^b   Pilla, F ^b   Capote, J ^c   Zidi, A ^a   Jordana, J ^a   Ferrando, A ^a   Delgado, J V ^d   Martinez A ^d   Vidal, O ^e   Amills, M ^a  

^a UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

^b UNIVERSITY OF MOLISE   (Italy)

^c INSTITUTO CANARIO DE INVESTIGACIONES AGRARIAS   (Spain)

^d UNIVERSITY OF CÓRDOBA   (Spain)

^e UNIVERSITY OF GIRONA   (Spain)

Author keywords

Agouti signaling protein; Coat color; Goat

Indexed keywords

AMINO ACID SUBSTITUTION; ARTICLE; COAT COLOR; CONTROLLED STUDY; DISULFIDE BOND; GENE; GENE MUTATION; GENE SEQUENCE; GENETIC POLYMORPHISM; GEOGRAPHICAL VARIATION (SPECIES); GOAT; GOUT AGOUTI SIGNALING PROTEIN GENE; INTRONIC MUTATION; LOSS OF FUNCTION MUTATION; MISSENSE MUTATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PIGMENTATION; POPULATION DIFFERENTIATION;

AGOUTI SIGNALING PROTEIN; AMINO ACID SUBSTITUTION; ANIMALS; GENE FREQUENCY; GOATS; HAIR COLOR; ITALY; POLYMORPHISM, GENETIC; SPAIN;

AGOUTI; CAPRA HIRCUS; MAMMALIA;

EID: 79960845064     PISSN: 00062928     EISSN: 15734927     Source Type: Journal    
DOI: 10.1007/s10528-011-9427-7     Document Type: Article

References (18)

1. M Amills J Capote A Tomàs L Kelly G Obexer-Ruff A Angiolillo A Sanchez 2004 Strong phylogeographic relationships among three goat breeds from the Canary Islands J Dairy Res 71 257 262 15354570 10.1017/S0022029904000342 1:CAS:528:DC%2BD2cXlvF2mtrk%3D (Pubitemid 39059423)
2. E Conti E Izaurralde 2005 Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species Curr Opin Cell Biol 17 316 325 15901503 10.1016/j.ceb.2005.04.005 1:CAS:528:DC%2BD2MXktleiu7g%3D (Pubitemid 40719923)
3. L Fontanesi F Beretti V Riggio S Dall'Olio E Gómez González R Finocchiaro R Davoli V Russo B Portolano 2009 Missense and nonsense mutations in melanocortin 1 receptor (MC1R) gene of different goat breeds: association with red and black coat color phenotypes but with unexpected evidences BMC Genet 10 47 19706191 10.1186/1471-2156-10-47
4. L Fontanesi F Beretti V Riggio E Gómez González S Dall'Olio R Davoli V Russo B Portolano 2009 Copy number variation and missense mutations of the agouti signaling protein (ASIP) gene in goat breeds with different coat colors Cytogenet Genome Res 126 333 347 20016133 10.1159/000268089 1:CAS:528:DC%2BC3cXht1Wks74%3D
5. Hartl DL, Clark AG (1989) Principles of Population Genetics, 2nd edn. Sinauer Associates, Sunderland, pp 123-132
6. T Hida K Wakamatsu EV Sviderskaya AJ Donkin L Montoliu M Lynn Lamoreux B Yu GL Millhauser S Ito GS Barsh K Jimbow DC Bennett 2009 Agouti protein, mahogunin, and attractin in pheomelanogenesis and melanoblast-like alteration of melanocytes: a cAMP-independent pathway Pigment Cell Melanoma Res 22 623 634 19493315 10.1111/j.1755-148X.2009.00582.x 1:CAS:528:DC%2BD1MXht1WhtbvI
7. H Levene 1949 On a matching problem in genetics Ann Math Stat 20 91 94 10.1214/aoms/1177730093
8. XL Li JW Zhao CJ Tang RY Zhou G Zheng LH Li XL Guo 2010 Sequencing of part of the goat agouti gene and SNP identification Biochem Genet 48 152 156 20094847 10.1007/s10528-009-9307-6 1:CAS:528:DC%2BC3cXos1yhtg%3D%3D
9. BJ Norris VA Whan 2008 A gene duplication affecting expression of the ovine ASIP gene is responsible for white and black sheep Genome Res 18 1282 1293 18493018 10.1101/gr.072090.107 1:CAS:528:DC%2BD1cXpsFOmsLc%3D
10. Olson TA (1999) Genetics of colour variation. In: Fries R, Ruvinsky A (eds) The genetics of cattle. CABI Publishing, Wallingford
11. LJ Royo I Alvarez JJ Arranz I Fernández A Rodríguez L Pérez-Pardal F Goyache 2008 Differences in the expression of the ASIP gene are involved in the recessive black coat colour pattern in sheep: evidence from the rare Xalda sheep breed Anim Genet 39 290 293 18384465 10.1111/j.1365-2052.2008.01712.x 1:CAS:528:DC%2BD1cXnslGru70%3D
12. K Seo TR Mohanty T Choi I Hwang 2007 Biology of epidermal and hair pigmentation in cattle: a mini-review Vet Dermatol 18 392 400 17991156 10.1111/j.1365-3164.2007.00634.x (Pubitemid 350076182)
13. Shannon CE, Weaver W (1949) A mathematical model of communication. University of Illinois Press, Urbana
14. F Tajima 1989 Statistical method for testing the neutral mutation hypothesis by DNA polymorphism Genetics 123 585 595 2513255 1:CAS:528: DyaK3cXhslentA%3D%3D (Pubitemid 19274682)
15. CJ Tang RY Zhou XL Li JW Zhao LH Li FJ Feng DF Li JT Wang XL Guo JF Keng 2008 Variation of 423G > T in the Agouti gene exon 4 in indigenous Chinese goat breeds Biochem Genet 46 770 780 18792776 10.1007/s10528-008-9192-4 1:CAS:528:DC%2BD1cXhtlalsLjN
16. PD Thomas A Kejariwal 2004 Coding single-nucleotide polymorphisms associated with complex vs. Mendelian disease: evolutionary evidence for differences in molecular effects Proc Natl Acad Sci USA 101 15398 15403 15492219 10.1073/pnas.0404380101 1:CAS:528:DC%2BD2cXhtVKhsbrK (Pubitemid 39441553)
17. JR Thompson RW Everett NL Hammerschmidt 2000 Effects of inbreeding on production and survival in Holsteins J Dairy Sci 83 1856 1864 10984163 10.3168/jds.S0022-0302(00)75057-0 1:CAS:528:DC%2BD3cXlvFersb4%3D
18. B Yu GL Millhauser 2007 Chemical disulfide mapping identifies an inhibitor cystine knot in the agouti signaling protein FEBS Lett 581 5561 5565 17997984 10.1016/j.febslet.2007.10.062 1:CAS:528:DC%2BD2sXhtlykt7%2FP (Pubitemid 350179761)