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Volumn 13, Issue 6, 2011, Pages 713-720

A multiplex real-time PCR assay for the simultaneous quantification of the major plant-parasitic nematodes in Japan

Author keywords

Cycleave; direct quantification; Globodera rostochiensis; Heterodera glycines; Meloidogyne incognita; Pratylenchus penetrans; SYBR Green I

Indexed keywords

ABUNDANCE; DETECTION METHOD; GENETIC ANALYSIS; NEMATODE; PARASITE; POLYMERASE CHAIN REACTION; PROBE; SOIL FAUNA;

EID: 79960771513     PISSN: 13885545     EISSN: 15685411     Source Type: Journal    
DOI: 10.1163/138855410X543175     Document Type: Article
Times cited : (8)

References (21)
  • 1
    • 0030040899 scopus 로고    scopus 로고
    • Cycling probe technology with RNase H attached to an oligonucleotide
    • BEKKAOUI, F., POISSON, I., CROSBY, W., CLONEY, L. & DUCK, P. (1996). Cycling probe technology with RNase H attached to an oligonucleotide. BioTechniques 20, 240-248. (Pubitemid 26043574)
    • (1996) BioTechniques , vol.20 , Issue.2 , pp. 240-248
    • Bekkaoui, F.1    Poisson, I.2    Crosby, W.3    Cloney, L.4    Duck, P.5
  • 3
    • 0000274726 scopus 로고    scopus 로고
    • Direct extraction of DNA from soil for amplification of 16S rRNA gene sequences by polymerase chain reaction
    • CHO, J.C., LEE, D.H., CHO, Y.C., CHO, J.C. & KIM, S.J. (1996). Direct extraction of DNA from soil for amplification of 16S rRNA gene sequences by polymerase chain reaction. Journal of Microbiology 34, 229-235.
    • (1996) Journal of Microbiology , vol.34 , pp. 229-235
    • Cho, J.C.1    Lee, D.H.2    Cho, Y.C.3    Cho, J.C.4    Kim, S.J.5
  • 4
    • 0034932974 scopus 로고    scopus 로고
    • Conventional PCR and real-time quantitative PCR detection of Helminthosporium solani in soil and on potato tubers
    • DOI 10.1023/A:1011247826231
    • CULLEN, D.W., LEES, A.K., TOTH, I.K. & DUNCAN, J.M. (2001). Conventional PCR and real-time quantitative PCR detection of Helminthosporium solani in soil and on potato tubers. European Journal of Plant Pathology 107, 387-398. (Pubitemid 32620608)
    • (2001) European Journal of Plant Pathology , vol.107 , Issue.4 , pp. 387-398
    • Cullen, D.W.1    Lees, A.K.2    Toth, I.K.3    Duncan, J.M.4
  • 5
    • 78650133520 scopus 로고    scopus 로고
    • A novel detection method for the soybean cyst nematode Heterodera glycines Ichinohe using soil compaction and real-time PCR
    • GOTO, K., SATO, E. & TOYOTA, K. (2009). A novel detection method for the soybean cyst nematode Heterodera glycines Ichinohe using soil compaction and real-time PCR. Nematological Research 39, 1-7.
    • (2009) Nematological Research , vol.39 , pp. 1-7
    • Goto, K.1    Sato, E.2    Toyota, K.3
  • 6
    • 85103230919 scopus 로고
    • Nematodes
    • Weaver, R.W., Angle, S., Bottomley, P., Bezdicek, D., Smith, S., Tabatabai, A. & Wollum, A. (Eds) . Madison, WI, USA, Soil Science Society of America
    • INGHAM, R.E. (1994). Nematodes. In: Weaver, R.W., Angle, S., Bottomley, P., Bezdicek, D., Smith, S., Tabatabai, A. & Wollum, A. (Eds). Methods of soil analysis. Part 2. Microbiological and biochemical properties. Madison, WI, USA, Soil Science Society of America, pp. 459-490.
    • (1994) Methods of Soil Analysis. Part 2. Microbiological and Biochemical Properties , pp. 459-490
    • Ingham, R.E.1
  • 7
    • 33745978169 scopus 로고    scopus 로고
    • Amplification facilitators and multiplex PCR: Tools to overcome PCR-inhibition in DNA-gut-content analysis of soil-living invertebrates
    • DOI 10.1016/j.soilbio.2005.11.034, PII S0038071706000678
    • JUEN, A. & TRAUGOTT, M. (2006). Amplification facilitators and multiplex PCR: tools to overcome PCR-inhibition in DNA gut content analysis of soil-living invertebrates. Soil Biology and Biochemistry 38, 1872-1879. (Pubitemid 44067131)
    • (2006) Soil Biology and Biochemistry , vol.38 , Issue.7 , pp. 1872-1879
    • Juen, A.1    Traugott, M.2
  • 8
    • 67649982788 scopus 로고    scopus 로고
    • Rapid and accurate prediction of the frequencies of Bursaphelenchus xylophilus and B. mucronatus in mixed nematode samples using real-time species-specific PCR
    • KANG, J.S., MOON, I.S., LEE, S.G., SHIN, S.C. & LEE, S.H. (2009). Rapid and accurate prediction of the frequencies of Bursaphelenchus xylophilus and B. mucronatus in mixed nematode samples using real-time species-specific PCR. Nematology 11, 289-299.
    • (2009) Nematology , vol.11 , pp. 289-299
    • Kang, J.S.1    Moon, I.S.2    Lee, S.G.3    Shin, S.C.4    Lee, S.H.5
  • 9
    • 33751239117 scopus 로고    scopus 로고
    • Quantification of the slug parasitic nematode Phasmarhabditis hermaphrodita from soil samples using real time qPCR
    • DOI 10.1016/j.ijpara.2006.08.005, PII S002075190600292X
    • MACMILLAN, K., BLOK, V., YOUNG, I., CRAWFORD, J. & WILSON, M.J. (2006). Quantification of the slug parasitic nematode Phasmarhabditis hermaphrodita from soil samples using real time qPCR. International Journal for Parasitology 36, 1453-1461. (Pubitemid 44781332)
    • (2006) International Journal for Parasitology , vol.36 , Issue.14 , pp. 1453-1461
    • MacMillan, K.1    Blok, V.2    Young, I.3    Crawford, J.4    Wilson, M.J.5
  • 10
    • 12944297735 scopus 로고    scopus 로고
    • Quantitative detection of the potato cyst nematode, Globodera pallida, and the beet cyst nematode, Heterodera schachtii, using Real-Time PCR with SYBR green I dye
    • DOI 10.1016/j.mcp.2004.09.006, PII S0890850804000933
    • MADANI, M., SUBBOTIN, S.A. & MOENS, M. (2005). Quantitative detection of the potato cyst nematode, Globodera pallida, and the beet cyst nematode, Heterodera schachtii, using Real-Time PCR with SYBR green I dye. Molecular and Cellular Probes 19, 81-86. (Pubitemid 40174725)
    • (2005) Molecular and Cellular Probes , vol.19 , Issue.2 , pp. 81-86
    • Madani, M.1    Subbotin, S.A.2    Moens, M.3
  • 11
    • 77955210703 scopus 로고    scopus 로고
    • Multiplex real-time polymerase chain reaction for identifying potato cyst nematodes, globodera pallida and globodera rostochiensis, and the tobacco cyst nematode, globodera tabacum
    • MADANI, M., WARD, L.J. & DE BOER, S.H. (2008). Multiplex real-time polymerase chain reaction for identifying potato cyst nematodes, Globodera pallida and Globodera rostochiensis, and the tobacco cyst nematode, Globodera tabacum. Canadian Journal of Plant Pathology 30, 554-564.
    • (2008) Canadian Journal of Plant Pathology , vol.30 , pp. 554-564
    • Madani, M.1    Ward, L.J.2    De Boer, S.H.3
  • 12
    • 78650117369 scopus 로고    scopus 로고
    • Development of a direct quantitative detection method for Meloidogyne incognita in sandy soils and its application to sweet potato cultivated fields in Tokushima prefecture, Japan
    • MIN, Y.Y., TOYOTA, K., GOTO, K., SATO, E., MIZUGUCHI, S., ABE, N., NAKANO, A. & SAWADA, E. (2011). Development of a direct quantitative detection method for Meloidogyne incognita in sandy soils and its application to sweet potato cultivated fields in Tokushima prefecture, Japan. Nematology 13, 95-102.
    • (2011) Nematology , vol.13 , pp. 95-102
    • Min, Y.Y.1    Toyota, K.2    Goto, K.3    Sato, E.4    Mizuguchi, S.5    Abe, N.6    Nakano, A.7    Sawada, E.8
  • 13
    • 67749120411 scopus 로고    scopus 로고
    • Tomato culture filtrate stimulates hatching and activity of Meloidogyne incognita juveniles
    • OKA, Y. & MIZUKUBO, T. (2009). Tomato culture filtrate stimulates hatching and activity of Meloidogyne incognita juveniles. Nematology 11, 51-61.
    • (2009) Nematology , vol.11 , pp. 51-61
    • Oka, Y.1    Mizukubo, T.2
  • 14
    • 41549118857 scopus 로고    scopus 로고
    • Development of a routine DNA-based testing service for soilborne diseases in Australia
    • DOI 10.1071/AP08029
    • OPHEL-KELLER, K., MCKAY, A., HARTLEY, D., HERDINA & CURRAN, J. (2008). Development of a routine DNAbased testing service for soil-borne diseases in Australia. Australasian Plant Pathology 37, 243-253. (Pubitemid 351469099)
    • (2008) Australasian Plant Pathology , vol.37 , Issue.3 , pp. 243-253
    • Ophel-Keller, K.1    McKay, A.2    Hartley, D.3    Herdina4    Curran, J.5
  • 15
    • 37849049550 scopus 로고    scopus 로고
    • Hatching of the root-lesion nematode, Pratylenchus penetrans, under the influence of temperature and host
    • PUDASAINI, M.P., VIAENE, N. & MOENS, M. (2008). Hatching of the root-lesion nematode, Pratylenchus penetrans, under the influence of temperature and host. Nematology 10, 47-54.
    • (2008) Nematology , vol.10 , pp. 47-54
    • Pudasaini, M.P.1    Viaene, N.2    Moens, M.3
  • 16
    • 70349675827 scopus 로고    scopus 로고
    • Detection of the root-lesion nematode, Pratylenchus penetrans, in a nematode community using real-time PCR
    • SATO, E.,MIN, Y.Y., SHIRAKASHI, T.,WADA, S. & TOYOTA, K. (2007). Detection of the root-lesion nematode, Pratylenchus penetrans, in a nematode community using real-time PCR. Japanese Journal of Nematology 37, 87-92.
    • (2007) Japanese Journal of Nematology , vol.37 , pp. 87-92
    • Sato, E.1    Min, Y.Y.2    Shirakashi, T.3    Wada, S.4    Toyota, K.5
  • 17
    • 68949101187 scopus 로고    scopus 로고
    • Relationships between the damage to radish caused by the rootlesion nematode pratylenchus penetrans, its density prior to cultivation and the soil nematode community structure evaluated by polymerase chain reaction-denaturing gradient gel electrophoresis
    • SATO, E.,MIN, Y.Y., TOYOTA, K. & TAKADA, A. (2009). Relationships between the damage to radish caused by the rootlesion nematode Pratylenchus penetrans, its density prior to cultivation and the soil nematode community structure evaluated by polymerase chain reaction-denaturing gradient gel electrophoresis. Soil Science and Plant Nutrition 55, 478-484.
    • (2009) Soil Science and Plant Nutrition , vol.55 , pp. 478-484
    • Sato, E.1    Min, Y.Y.2    Toyota, K.3    Takada, A.4
  • 18
    • 78650090989 scopus 로고    scopus 로고
    • Quantitative detection of pratylenchus penetrans from soil using soil compaction and real-time PCR
    • SATO, E., GOTO, K., MIN, Y.Y., TOYOTA, K. & SUZUKI, C. (2010). Quantitative detection of Pratylenchus penetrans from soil using soil compaction and real-time PCR. Nematological Research 40, 1-6.
    • (2010) Nematological Research , vol.40 , pp. 1-6
    • Sato, E.1    Goto, K.2    Min, Y.Y.3    Toyota, K.4    Suzuki, C.5
  • 19
    • 38049089740 scopus 로고    scopus 로고
    • Development of a real-time PCR method for the potato-cyst nematode globodera rostochiensis and the root-knot nematode meloidogyne incognita
    • TOYOTA, K., SHIRAKASHI, T., SATO, E., WADA, S. & MIN, Y.Y. (2008). Development of a real-time PCR method for the potato-cyst nematode Globodera rostochiensis and the root-knot nematode Meloidogyne incognita. Soil Science and Plant Nutrition 54, 72-76.
    • (2008) Soil Science and Plant Nutrition , vol.54 , pp. 72-76
    • Toyota, K.1    Shirakashi, T.2    Sato, E.3    Wada, S.4    Min, Y.Y.5
  • 21
    • 33750286648 scopus 로고    scopus 로고
    • A multiplex real-time polymerase chain reaction (TaqMan) assay for the simultaneous detection of Meloidogyne chitwoodi and M. fallax
    • DOI 10.1094/PHYTO-96-1255
    • ZIJLSTRA, C. & VAN HOOF, R.A. (2006). A multiplex realtime polymerase chain reaction (TaqMan) assay for the simultaneous detection of Meloidogyne chitwoodi and M. fallax. Phytopathology 96, 1255-1262. (Pubitemid 44631051)
    • (2006) Phytopathology , vol.96 , Issue.11 , pp. 1255-1262
    • Zijlstra, C.1    Van Hoof, R.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.