메뉴 건너뛰기




Volumn 36, Issue 14, 2006, Pages 1453-1461

Quantification of the slug parasitic nematode Phasmarhabditis hermaphrodita from soil samples using real time qPCR

Author keywords

Phasmarhabditis hermaphrodita; Real time PCR; Soil

Indexed keywords

BIOCONTROL AGENT; BIOLOGICAL CONTROL; DNA; HERMAPHRODITE; MORPHOLOGY; NEMATODE; PEST CONTROL; SLUG;

EID: 33751239117     PISSN: 00207519     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijpara.2006.08.005     Document Type: Article
Times cited : (27)

References (46)
  • 1
    • 0036658604 scopus 로고    scopus 로고
    • Identification of the beet cyst nematode Heterodera schachtii by PCR
    • Amari S., Subbotin S.A., and Moens M. Identification of the beet cyst nematode Heterodera schachtii by PCR. Eur. J. Plant Pathol. 108 (2002) 497-506
    • (2002) Eur. J. Plant Pathol. , vol.108 , pp. 497-506
    • Amari, S.1    Subbotin, S.A.2    Moens, M.3
  • 2
    • 0037951781 scopus 로고    scopus 로고
    • Failure to genotype herpes simplex virus by real-time PCR assay and melting curve analysis due to sequence variation within probe binding sites
    • Anderson T.P., Werno A.M., Benyon K.A., and Murdoch D.R. Failure to genotype herpes simplex virus by real-time PCR assay and melting curve analysis due to sequence variation within probe binding sites. J. Clin. Microbiol. 41 (2003) 2135-2137
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 2135-2137
    • Anderson, T.P.1    Werno, A.M.2    Benyon, K.A.3    Murdoch, D.R.4
  • 3
    • 33751220051 scopus 로고    scopus 로고
    • Andrássy, I., 1983. A taxonomic review of the suborder Rhabditina (Nematoda: Secernentea). Paris, France, ORSTOM.
  • 4
    • 11144291135 scopus 로고    scopus 로고
    • The use of real-time PCR and species-specific primers for the identification and monitoring of Paecilomyces lilacinus
    • Atkins S.D., Clark I.M., Pande S., Hirch P.R., and Kerry B.R. The use of real-time PCR and species-specific primers for the identification and monitoring of Paecilomyces lilacinus. FEMS Microb. Ecol. 51 (2005) 257-264
    • (2005) FEMS Microb. Ecol. , vol.51 , pp. 257-264
    • Atkins, S.D.1    Clark, I.M.2    Pande, S.3    Hirch, P.R.4    Kerry, B.R.5
  • 5
    • 84861106096 scopus 로고
    • A simple technique for the detection of insect parasitic nematodes in soil
    • Bedding R.A., and Akhurst R.J. A simple technique for the detection of insect parasitic nematodes in soil. Nematologica 21 (1975) 109-110
    • (1975) Nematologica , vol.21 , pp. 109-110
    • Bedding, R.A.1    Akhurst, R.J.2
  • 6
    • 7944231129 scopus 로고    scopus 로고
    • Quantitation of porcine circovirus type 2 isolated from serum/plasma and tissue samples of healthy pigs and pigs with post weaning multisystematic wasting syndrome using a TaqMan-based real-time PCR
    • Brunborg I.M., Moldal T., and Jonassen C.M. Quantitation of porcine circovirus type 2 isolated from serum/plasma and tissue samples of healthy pigs and pigs with post weaning multisystematic wasting syndrome using a TaqMan-based real-time PCR. J. Virol. Met. 122 (2004) 171-178
    • (2004) J. Virol. Met. , vol.122 , pp. 171-178
    • Brunborg, I.M.1    Moldal, T.2    Jonassen, C.M.3
  • 7
    • 85032068933 scopus 로고
    • Entomopathogenic nematode (Heterorhabditidae and Steinernematidae) seasonal population dynamics and impact on insect populations in turfgrass
    • Campbell J.F., Lewis E.E., Yoder F., and Gaugler R. Entomopathogenic nematode (Heterorhabditidae and Steinernematidae) seasonal population dynamics and impact on insect populations in turfgrass. Biol. Control 5 (1995) 598-606
    • (1995) Biol. Control , vol.5 , pp. 598-606
    • Campbell, J.F.1    Lewis, E.E.2    Yoder, F.3    Gaugler, R.4
  • 8
    • 0029853634 scopus 로고    scopus 로고
    • Entomopathogenic nematode (Heterorhabditidae and Steinernematidae) spatial distribution in turfgrass
    • Campbell J.F., Lewis E.E., Yoder F., and Gaugler R. Entomopathogenic nematode (Heterorhabditidae and Steinernematidae) spatial distribution in turfgrass. Parasitology 113 (1996) 473-482
    • (1996) Parasitology , vol.113 , pp. 473-482
    • Campbell, J.F.1    Lewis, E.E.2    Yoder, F.3    Gaugler, R.4
  • 9
    • 0031890692 scopus 로고    scopus 로고
    • Spatial and temporal distribution of endemic and released entomopathogenic nematode populations in turfgrass
    • Campbell J.F., Orza G., Yoder F., Lewis E.E., and Gaugler R. Spatial and temporal distribution of endemic and released entomopathogenic nematode populations in turfgrass. Entomol. Exp. Appl. 86 (1998) 1-11
    • (1998) Entomol. Exp. Appl. , vol.86 , pp. 1-11
    • Campbell, J.F.1    Orza, G.2    Yoder, F.3    Lewis, E.E.4    Gaugler, R.5
  • 10
    • 17844377360 scopus 로고    scopus 로고
    • Detection of the pinewood nematode, Bursaphelenchus xylophilus, using a real-time polymerase chain reaction assay
    • Cao A.X., Liu X.Z., Zhu S.F., and Lu B.S. Detection of the pinewood nematode, Bursaphelenchus xylophilus, using a real-time polymerase chain reaction assay. Phytopathology 95 (2005) 566-571
    • (2005) Phytopathology , vol.95 , pp. 566-571
    • Cao, A.X.1    Liu, X.Z.2    Zhu, S.F.3    Lu, B.S.4
  • 11
    • 33751211380 scopus 로고    scopus 로고
    • Application of slug parasitic nematodes
    • Grewal P.S., Ehlers R.U., and Shapiro-Ilan D. (Eds), CABI Publishing, Wallingford
    • Ester A., and Wilson M.J. Application of slug parasitic nematodes. In: Grewal P.S., Ehlers R.U., and Shapiro-Ilan D. (Eds). Nematodes as Biological Control Agents (2005), CABI Publishing, Wallingford 431-444
    • (2005) Nematodes as Biological Control Agents , pp. 431-444
    • Ester, A.1    Wilson, M.J.2
  • 12
    • 0344211422 scopus 로고    scopus 로고
    • Direct quantification of fungal DNA in soil substrate using real-time PCR
    • Filion M., St-Arnaud M., and Jabaji-Hare S.H. Direct quantification of fungal DNA in soil substrate using real-time PCR. J. Microbiol. Methods 53 (2003) 67-76
    • (2003) J. Microbiol. Methods , vol.53 , pp. 67-76
    • Filion, M.1    St-Arnaud, M.2    Jabaji-Hare, S.H.3
  • 13
    • 0036010841 scopus 로고    scopus 로고
    • Molecular barcodes for soil nematode identification
    • Floyd R., Abebe E., Papert A., and Blaxter M. Molecular barcodes for soil nematode identification. Mol. Ecol. 11 (2002) 839-850
    • (2002) Mol. Ecol. , vol.11 , pp. 839-850
    • Floyd, R.1    Abebe, E.2    Papert, A.3    Blaxter, M.4
  • 14
    • 5644303122 scopus 로고    scopus 로고
    • Assessment of nematode biodiversity using DGGE of 18S rDNA following extraction of nematodes from soil
    • Foucher A.J.L., Bongers T., Noble L.R., and Wilson M.J. Assessment of nematode biodiversity using DGGE of 18S rDNA following extraction of nematodes from soil. Soil Biol. Biochem. 36 (2004) 2027-2032
    • (2004) Soil Biol. Biochem. , vol.36 , pp. 2027-2032
    • Foucher, A.J.L.1    Bongers, T.2    Noble, L.R.3    Wilson, M.J.4
  • 15
    • 0031171733 scopus 로고    scopus 로고
    • Field release and environmental fate of a transgenic entomopathogenic nematode
    • Gaugler R., Wilson M.J., and Shearer P.W. Field release and environmental fate of a transgenic entomopathogenic nematode. Biol. Control 9 (1997) 75-80
    • (1997) Biol. Control , vol.9 , pp. 75-80
    • Gaugler, R.1    Wilson, M.J.2    Shearer, P.W.3
  • 16
    • 0029661470 scopus 로고    scopus 로고
    • The diversity of soil communities, the 'poor man's tropical rain forest
    • Giller P.S. The diversity of soil communities, the 'poor man's tropical rain forest. Biodivers. Conserv. 5 (1996) 135-168
    • (1996) Biodivers. Conserv. , vol.5 , pp. 135-168
    • Giller, P.S.1
  • 18
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA and rRNA-based microbial community composition
    • Griffiths R.I., Whiteley A., O'Donnell A.G., and Bailey M.J. Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA and rRNA-based microbial community composition. Appl. Environ. Microbiol. 66 (2000) 5488-5491
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.2    O'Donnell, A.G.3    Bailey, M.J.4
  • 19
    • 0002051540 scopus 로고    scopus 로고
    • Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T.A. Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser. 41 (1999) 95-98
    • (1999) Nucl. Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 20
    • 0035144174 scopus 로고    scopus 로고
    • Quantification of ammonia-oxidising bacteria in arable soil by real-time PCR
    • Hermansson A., and Lindgren P.E. Quantification of ammonia-oxidising bacteria in arable soil by real-time PCR. Appl. Environ. Microbiol. 67 (2001) 972-976
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 972-976
    • Hermansson, A.1    Lindgren, P.E.2
  • 22
    • 0011269416 scopus 로고    scopus 로고
    • Biogeography
    • Gaugler R. (Ed), CABI Publishing, Wallingford
    • Hominick W.M. Biogeography. In: Gaugler R. (Ed). Entomopathogenic Nematology (2002), CABI Publishing, Wallingford 115-144
    • (2002) Entomopathogenic Nematology , pp. 115-144
    • Hominick, W.M.1
  • 23
    • 0002707528 scopus 로고
    • Extraction of free-living stages from soil
    • Southey J.F. (Ed), Her Majesty's Stationery Office, London
    • Hooper D.J. Extraction of free-living stages from soil. In: Southey J.F. (Ed). Laboratory Methods for Work with Plant and Soil Nematodes (1986), Her Majesty's Stationery Office, London 5-31
    • (1986) Laboratory Methods for Work with Plant and Soil Nematodes , pp. 5-31
    • Hooper, D.J.1
  • 24
    • 0033010476 scopus 로고    scopus 로고
    • Some observations on the morphology and protein profiles of the slug-parasitic nematodes Phasmarhabditis hermaphrodita and P. neopapillosa (Nematoda: Rhabditidae)
    • Hooper D.J., Wilson M.J., Rowe J.A., and Glen D.M. Some observations on the morphology and protein profiles of the slug-parasitic nematodes Phasmarhabditis hermaphrodita and P. neopapillosa (Nematoda: Rhabditidae). Nematology 1 (1999) 173-182
    • (1999) Nematology , vol.1 , pp. 173-182
    • Hooper, D.J.1    Wilson, M.J.2    Rowe, J.A.3    Glen, D.M.4
  • 27
    • 0038221311 scopus 로고    scopus 로고
    • Quantitative detection of methonotrophs in soil by novel pmoA-targeted real-time PCR assays
    • Kolb S., Knief C., Stubner S., and Conrad R. Quantitative detection of methonotrophs in soil by novel pmoA-targeted real-time PCR assays. Appl. Environ. Microbiol. 69 (2003) 2423-2429
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2423-2429
    • Kolb, S.1    Knief, C.2    Stubner, S.3    Conrad, R.4
  • 28
    • 0000616987 scopus 로고    scopus 로고
    • Nematodes
    • Lacey L., and Kaya H.K. (Eds), Kluwer Academic Publishers, Dordrecht, Netherlands
    • Koppenhöfer A.M. Nematodes. In: Lacey L., and Kaya H.K. (Eds). Field Manual of Techniques in Invertebrate Pathology (2000), Kluwer Academic Publishers, Dordrecht, Netherlands 283-301
    • (2000) Field Manual of Techniques in Invertebrate Pathology , pp. 283-301
    • Koppenhöfer, A.M.1
  • 29
    • 0031921668 scopus 로고    scopus 로고
    • Estimation of entomopathogenic nematode population density in soil by correlation between bait insect mortality and nematode penetration
    • Koppenhöffer A.M., Campbell J.C., Kaya H.K., and Gaugler R. Estimation of entomopathogenic nematode population density in soil by correlation between bait insect mortality and nematode penetration. Fundam. Appl. Nematol. 27 (1998) 95-102
    • (1998) Fundam. Appl. Nematol. , vol.27 , pp. 95-102
    • Koppenhöffer, A.M.1    Campbell, J.C.2    Kaya, H.K.3    Gaugler, R.4
  • 31
    • 12944297735 scopus 로고    scopus 로고
    • Quantitative detection of the potato cyst nematode, Globodera pallida, and the beet cyst nematode, Heterodera schachtii, using Real-Time PCR with SYBR green I dye
    • Madani M., Subbotin S.A., and Moens M. Quantitative detection of the potato cyst nematode, Globodera pallida, and the beet cyst nematode, Heterodera schachtii, using Real-Time PCR with SYBR green I dye. Mol. Cell. Probes 19 (2005) 81-86
    • (2005) Mol. Cell. Probes , vol.19 , pp. 81-86
    • Madani, M.1    Subbotin, S.A.2    Moens, M.3
  • 32
    • 0345129990 scopus 로고    scopus 로고
    • Multiplex detection of single-nucleotide variations using molecular beacons
    • Marras S.A.E., Kramer F.R., and Tyagi S. Multiplex detection of single-nucleotide variations using molecular beacons. Genet. Anal. 14 (1999) 151-156
    • (1999) Genet. Anal. , vol.14 , pp. 151-156
    • Marras, S.A.E.1    Kramer, F.R.2    Tyagi, S.3
  • 33
    • 20444471184 scopus 로고    scopus 로고
    • Habitat preference for entomopathogenic nematodes, their insect hosts and new faunistic records for the Czech Republic
    • Mráček Z., Bečvář S., Kindlmann P., and Jersáková J. Habitat preference for entomopathogenic nematodes, their insect hosts and new faunistic records for the Czech Republic. Biol. Contr. 34 (2005) 27-37
    • (2005) Biol. Contr. , vol.34 , pp. 27-37
    • Mráček, Z.1    Bečvář, S.2    Kindlmann, P.3    Jersáková, J.4
  • 34
    • 0029541317 scopus 로고
    • Measures of nematode community structure and sources of variability among and within agricultural fields
    • Neher D.A., Peck S.L., Rawlings J.O., and Campbell C.L. Measures of nematode community structure and sources of variability among and within agricultural fields. Plant Soil 170 (1995) 167-181
    • (1995) Plant Soil , vol.170 , pp. 167-181
    • Neher, D.A.1    Peck, S.L.2    Rawlings, J.O.3    Campbell, C.L.4
  • 36
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Krawetz S., and Misener S. (Eds), Humana Press, Totowa, NJ, USA Code at: http://fokker.wi.mit.edu/primer3
    • Rozen S., and Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S., and Misener S. (Eds). Bioinformatics Methods and Protocols in the series Methods in Molecular Biology (2000), Humana Press, Totowa, NJ, USA 365-386. http://fokker.wi.mit.edu/primer3 Code at: http://fokker.wi.mit.edu/primer3
    • (2000) Bioinformatics Methods and Protocols in the series Methods in Molecular Biology , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 37
    • 0001202836 scopus 로고
    • Laboratory extraction methods and field detection of entomopathogenic rhabditid nematodes from soil
    • Saunders M.C., and All J.N. Laboratory extraction methods and field detection of entomopathogenic rhabditid nematodes from soil. Environ. Entomol. 11 (1982) 1164-1165
    • (1982) Environ. Entomol. , vol.11 , pp. 1164-1165
    • Saunders, M.C.1    All, J.N.2
  • 38
    • 0030482742 scopus 로고    scopus 로고
    • Post-application persistence of entomopathogenic nematodes
    • Smitts P.H. Post-application persistence of entomopathogenic nematodes. Biocontrol. Sci. Technol. 6 (1996) 379-387
    • (1996) Biocontrol. Sci. Technol. , vol.6 , pp. 379-387
    • Smitts, P.H.1
  • 39
    • 0001914514 scopus 로고
    • Patchiness in populations of entomopathogenic nematodes
    • Stuart R.J., and Gaugler R. Patchiness in populations of entomopathogenic nematodes. J. Invertebr. Pathol. 64 (1994) 39-45
    • (1994) J. Invertebr. Pathol. , vol.64 , pp. 39-45
    • Stuart, R.J.1    Gaugler, R.2
  • 40
    • 0036829710 scopus 로고    scopus 로고
    • Quantitative analysis of ITS2 sequences in trichostrongyle parasites
    • Von Samson-Himmelstjerna G., Harder A., and Schnieder T. Quantitative analysis of ITS2 sequences in trichostrongyle parasites. Int. J. Parasitol. 32 (2002) 1529-1535
    • (2002) Int. J. Parasitol. , vol.32 , pp. 1529-1535
    • Von Samson-Himmelstjerna, G.1    Harder, A.2    Schnieder, T.3
  • 42
    • 0027074009 scopus 로고
    • Geostatistical analysis of cyst nematodes in soil
    • Webster R., and Boag B. Geostatistical analysis of cyst nematodes in soil. J. Soil Sci. 43 (1992) 583-589
    • (1992) J. Soil Sci. , vol.43 , pp. 583-589
    • Webster, R.1    Boag, B.2
  • 43
    • 3242674472 scopus 로고    scopus 로고
    • Factors limiting short-term persistence of entomopathogenic nematodes
    • Wilson M.J., and Gaugler R. Factors limiting short-term persistence of entomopathogenic nematodes. J. Appl. Entomol. 124 (2004) 250-253
    • (2004) J. Appl. Entomol. , vol.124 , pp. 250-253
    • Wilson, M.J.1    Gaugler, R.2
  • 44
    • 84890215917 scopus 로고    scopus 로고
    • Biology, production and formulation of slug-parasitic nematodes
    • Grewal P.S., Ehlers R.U., and Shapiro-Ilan D. (Eds), CABI Publishing, Wallingford
    • Wilson M.J., and Grewal P.S. Biology, production and formulation of slug-parasitic nematodes. In: Grewal P.S., Ehlers R.U., and Shapiro-Ilan D. (Eds). Nematodes as Biological Control Agents (2005), CABI Publishing, Wallingford 421-429
    • (2005) Nematodes as Biological Control Agents , pp. 421-429
    • Wilson, M.J.1    Grewal, P.S.2
  • 45
    • 0027331681 scopus 로고
    • The rhabditid nematode Phasmarhabditis hermaphrodita as a potential biological control agent for slugs
    • Wilson M.J., Glen D.M., and George S.K. The rhabditid nematode Phasmarhabditis hermaphrodita as a potential biological control agent for slugs. Biocontr. Sci. Technol. 3 (1993) 503-511
    • (1993) Biocontr. Sci. Technol. , vol.3 , pp. 503-511
    • Wilson, M.J.1    Glen, D.M.2    George, S.K.3
  • 46
    • 0037292809 scopus 로고    scopus 로고
    • Application pattern and persistence of the entomopathogenic nematode Heterorhabditis bacteriophora
    • Wilson M.J., Lewis E.E., Yoder F., and Gaugler R. Application pattern and persistence of the entomopathogenic nematode Heterorhabditis bacteriophora. Biol. Contr. 26 (2003) 180-188
    • (2003) Biol. Contr. , vol.26 , pp. 180-188
    • Wilson, M.J.1    Lewis, E.E.2    Yoder, F.3    Gaugler, R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.