-
2
-
-
58149090121
-
Extremely low genetic diversity in the endangered Hawaiian Monk Seal (Monachus schauinslandi)
-
Schultz JK, Baker JD, Toonen RJ, Bowen BW. Extremely low genetic diversity in the endangered Hawaiian Monk Seal (Monachus schauinslandi). J Hered 2009;100:25-33.
-
(2009)
J Hered
, vol.100
, pp. 25-33
-
-
Schultz, J.K.1
Baker, J.D.2
Toonen, R.J.3
Bowen, B.W.4
-
3
-
-
3242740080
-
Low genetic variability in the highly endangered Mediterranean monk seal
-
Pastor T, Garza JC, Allen P, et al. Low genetic variability in the highly endangered Mediterranean monk seal. J Hered 2004;95:291-300.
-
(2004)
J Hered
, vol.95
, pp. 291-300
-
-
Pastor, T.1
Garza, J.C.2
Allen, P.3
-
4
-
-
0031423427
-
Spotted seals, Phoca largha, in Alaska
-
Rugh DJ, Shelden KEW, Withrow DE. Spotted seals, Phoca largha, in Alaska. Marine Fisheries Rev 1997;59:1-18.
-
(1997)
Marine Fisheries Rev
, vol.59
, pp. 1-18
-
-
Rugh, D.J.1
Shelden, K.E.W.2
Withrow, D.E.3
-
6
-
-
31344477836
-
Estimates of historical population size of harbour seal (Phoca largha) in Liaodong Bay
-
Dong JH, Shen F. Estimates of historical population size of harbour seal (Phoca largha) in Liaodong Bay. Marine Sci 1991;5:26-31.
-
(1991)
Marine Sci
, vol.5
, pp. 26-31
-
-
Dong, J.H.1
Shen, F.2
-
7
-
-
77951453682
-
Spotted seals in the Estuary of Shuangtaizi River of Liaodong Bay
-
Han JB, Wang W, Ma ZQ. Spotted seals in the Estuary of Shuangtaizi River of Liaodong Bay. Marine Environ Sci 2005;24:51-3.
-
(2005)
Marine Environ Sci
, vol.24
, pp. 51-53
-
-
Han, J.B.1
Wang, W.2
Ma, Z.Q.3
-
8
-
-
77951480036
-
Low microsatellite variation in spotted seal (Phoca largha) shows a decrease in population size in the Liaodong Gulf colony
-
Han JB, Sun FY, Gao XG, et al. Low microsatellite variation in spotted seal (Phoca largha) shows a decrease in population size in the Liaodong Gulf colony. Ann Zool Fennici 2010;47:15-27.
-
(2010)
Ann Zool Fennici
, vol.47
, pp. 15-27
-
-
Han, J.B.1
Sun, F.Y.2
Gao, X.G.3
-
9
-
-
80054775167
-
-
Draft Report to the National Marine Mammal Laboratory. Harbor Branch Oceanographic Institute, Florida Atlantic University, Fort Pierce, FL, USA
-
O'Corry-Crowe G, Bonin C. The biogeog - raphy and population structure of spotted seal (Phoca largha) as revealed by mitochondrial and microsatellite DNA. Draft Report to the National Marine Mammal Laboratory. Harbor Branch Oceanographic Institute, Florida Atlantic University, Fort Pierce, FL, USA 2009.
-
(2009)
The Biogeog - Raphy and Population Structure of Spotted Seal (Phoca Largha) as Revealed By Mitochondrial and Microsatellite DNA
-
-
O'corry-Crowe, G.1
Bonin, C.2
-
10
-
-
0041350299
-
Population genetic structure of the spotted seal Phoca largha along the coast of Hokkaido, based on mitochondrial DNA sequences
-
Mizuno AW, Onuma M, Takahashi M, Ohtaishi N. Population genetic structure of the spotted seal Phoca largha along the coast of Hokkaido, based on mitochondrial DNA sequences. Zoolog Sci 2003;20:783-8.
-
(2003)
Zoolog Sci
, vol.20
, pp. 783-788
-
-
Mizuno, A.W.1
Onuma, M.2
Takahashi, M.3
Ohtaishi, N.4
-
11
-
-
77951496311
-
Sequence analysis of mitochondrial tRNAthr, tRNAPro and control region from spotted seals (Phoca largha) in Liaodong Gulf
-
Han JB, He CB, Wang XM, et al. Sequence analysis of mitochondrial tRNAthr, tRNAPro and control region from spotted seals (Phoca largha) in Liaodong Gulf. Fisheries Sci 2007;26:74-8.
-
(2007)
Fisheries Sci
, vol.26
, pp. 74-78
-
-
Han, J.B.1
He, C.B.2
Wang, X.M.3
-
12
-
-
27944488619
-
Patterns of genetic diversity and its loss in mammalian populations
-
Garner A, Rachlow JL, Hicks JF. Patterns of genetic diversity and its loss in mammalian populations. Conserv Biol 2005;4:1215-21.
-
(2005)
Conserv Biol
, vol.4
, pp. 1215-1221
-
-
Garner, A.1
Rachlow, J.L.2
Hicks, J.F.3
-
14
-
-
58149474536
-
Molecular genetic analysis of a captive- breeding program: The vulnerable endemic Jamaican Yellow Boa
-
Tzika AC, Remy C, Gibson R, Milinkovitch MC. Molecular genetic analysis of a captive- breeding program: the vulnerable endemic Jamaican Yellow Boa. Conserv Genet 2009;10:69-77.
-
(2009)
Conserv Genet
, vol.10
, pp. 69-77
-
-
Tzika, A.C.1
Remy, C.2
Gibson, R.3
Milinkovitch, M.C.4
-
15
-
-
30344438550
-
OligoFaktory: A visual tool for interactive oligonucleotide design
-
Schretter C, Milinkovitch MC. OligoFaktory: a visual tool for interactive oligonucleotide design. Bioinformatics 2006;22:115-6.
-
(2006)
Bioinformatics
, vol.22
, pp. 115-116
-
-
Schretter, C.1
Milinkovitch, M.C.2
-
16
-
-
4344606590
-
Micro-Checker: Software for identifying and correcting genotyping errors in microsatellite data
-
Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P. Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 2004;4:535-8.
-
(2004)
Mol Ecol Notes
, vol.4
, pp. 535-538
-
-
van Oosterhout, C.1
Hutchinson, W.F.2
Wills, D.P.M.3
Shipley, P.4
-
17
-
-
85007110786
-
Arlequin version 3: An integrated software package for population genetics data analysis
-
Excoffier L, Laval G, Schneider S. Arlequin version 3: an integrated software package for population genetics data analysis. Evol Bioinform Online 2005;1:47-50.
-
(2005)
Evol Bioinform Online
, vol.1
, pp. 47-50
-
-
Excoffier, L.1
Laval, G.2
Schneider, S.3
-
19
-
-
0032880393
-
Bottleneck: A computer program for detecting recent reductions in the effective population size using allele frequency data
-
Piry S, Luikart G, Cornuet JM. Bottleneck: a computer program for detecting recent reductions in the effective population size using allele frequency data. J Hered 1999;90:502-3.
-
(1999)
J Hered
, vol.90
, pp. 502-503
-
-
Piry, S.1
Luikart, G.2
Cornuet, J.M.3
-
20
-
-
0030478757
-
Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
-
Cornuet JM, Luikart G. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 1996;144:2001-14.
-
(1996)
Genetics
, vol.144
, pp. 2001-2014
-
-
Cornuet, J.M.1
Luikart, G.2
-
21
-
-
0031866781
-
Distortion of allele frequency distributions provides a test for recent population bottlenecks
-
Luikart G, Allendorf FW, Cornuet JM, Sherwin WB. Distortion of allele frequency distributions provides a test for recent population bottlenecks. J Hered 1998;89:238-47.
-
(1998)
J Hered
, vol.89
, pp. 238-247
-
-
Luikart, G.1
Allendorf, F.W.2
Cornuet, J.M.3
Sherwin, W.B.4
-
22
-
-
0035076168
-
Detection of reduction in population size using data from microsatellite loci
-
Garza JC, Williamson EG. Detection of reduction in population size using data from microsatellite loci. Mol Ecol 2001;10:305-18.
-
(2001)
Mol Ecol
, vol.10
, pp. 305-318
-
-
Garza, J.C.1
Williamson, E.G.2
-
23
-
-
33745015584
-
A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci
-
Waples RS. A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci. Conserv Genet 2006;7:167-84.
-
(2006)
Conserv Genet
, vol.7
, pp. 167-184
-
-
Waples, R.S.1
-
24
-
-
47249162403
-
LDNE: A program for estimating effective population size from data on linkage disequilibrium
-
Waples RS, Do C. LDNE: a program for estimating effective population size from data on linkage disequilibrium. Mol Ecol Resources 2008;8:753-6.
-
(2008)
Mol Ecol Resources
, vol.8
, pp. 753-756
-
-
Waples, R.S.1
Do, C.2
-
25
-
-
77954278662
-
Single linkage disequilibrium estimates of contemporary Ne using highly variable genetic markers: A largely untapped resource for applied conservation and evolution
-
Waples RS, Do C. Single linkage disequilibrium estimates of contemporary Ne using highly variable genetic markers: a largely untapped resource for applied conservation and evolution. Evol Appl 2010;3:244-62.
-
(2010)
Evol Appl
, vol.3
, pp. 244-262
-
-
Waples, R.S.1
Do, C.2
-
26
-
-
0029744513
-
On the potential for estimating the effective number of breeders from heterozygote excess in progeny
-
Pudovkin AI, Zaykin DV, Hedgecock D. On the potential for estimating the effective number of breeders from heterozygote excess in progeny. Genetics 1996;144:383-7.
-
(1996)
Genetics
, vol.144
, pp. 383-387
-
-
Pudovkin, A.I.1
Zaykin, D.V.2
Hedgecock, D.3
-
27
-
-
33644898913
-
-
Ver 1.3. Department of Primary Industries and Fisheries, Queensland Government, Queensland
-
Peel D, Ovenden JR, Peel SL. NeEstimator: software for estimating effective population size. Ver 1.3. Department of Primary Industries and Fisheries, Queensland Government, Queensland, 2004.
-
(2004)
NeEstimator: Software for Estimating Effective Population Size
-
-
Peel, D.1
Ovenden, J.R.2
Peel, S.L.3
-
28
-
-
0036964474
-
Approximate Bayesian computation in population genetics
-
Beaumont MA, Zhang W, Balding DJ. Approximate Bayesian computation in population genetics. Genetics 2002;162:2025-35.
-
(2002)
Genetics
, vol.162
, pp. 2025-2035
-
-
Beaumont, M.A.1
Zhang, W.2
Balding, D.J.3
-
29
-
-
38949178372
-
ONeSAMP: A program to estimate effective population size using approximate Bayesian computation
-
Tallmon DA, Koyuk A, Luikart G, Beaumont MA. ONeSAMP: a program to estimate effective population size using approximate Bayesian computation. Mol Ecol Resources 2008;8:299-301.
-
(2008)
Mol Ecol Resources
, vol.8
, pp. 299-301
-
-
Tallmon, D.A.1
Koyuk, A.2
Luikart, G.3
Beaumont, M.A.4
-
30
-
-
0030047992
-
Worldwide patterns of mitochondrial DNA differentiation in the harbor seal (Phoca vitulina)
-
Stanley HF, Casey S, Carnahan JM, et al. Worldwide patterns of mitochondrial DNA differentiation in the harbor seal (Phoca vitulina). Mol Biol Evol 1996;13:368-82.
-
(1996)
Mol Biol Evol
, vol.13
, pp. 368-382
-
-
Stanley, H.F.1
Casey, S.2
Carnahan, J.M.3
-
31
-
-
0032900678
-
Median- Joining networks for inferring intraspecific phylogenies
-
Bandelt HJ, Forster P, Röhl A. Median- Joining networks for inferring intraspecific phylogenies. Mol Biol Evol 1999;16:37-48.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 37-48
-
-
Bandelt, H.J.1
Forster, P.2
Röhl, A.3
-
32
-
-
0038645591
-
The phylogeography of dusky dolphins (Lagenorhynchus obscurus): A critical examination of network methods and rooting procedures
-
Cassens I, Van Waerebeek K, Best PB, et al. The phylogeography of dusky dolphins (Lagenorhynchus obscurus): a critical examination of network methods and rooting procedures. Mol Ecol 2003;12:1781-92.
-
(2003)
Mol Ecol
, vol.12
, pp. 1781-1792
-
-
Cassens, I.1
van Waerebeek, K.2
Best, P.B.3
-
33
-
-
79960596280
-
A comparison of methods for constructing evolutionary networks from intraspecific DNA sequence
-
Bertorelle G, Bruford MW, Hauffe HC, Rizzoli A, and Vernesi C, eds. Cambridge: Cambridge University Press
-
Mardulyn P, Cassens I, Milinkovitch MC. A comparison of methods for constructing evolutionary networks from intraspecific DNA sequence. In: population genetics for animal conservation. Bertorelle G, Bruford MW, Hauffe HC, Rizzoli A, and Vernesi C, eds. Cambridge: Cambridge University Press, 2009
-
(2009)
Population Genetics for Animal Conservation
-
-
Mardulyn, P.1
Cassens, I.2
Milinkovitch, M.C.3
-
34
-
-
0026681074
-
Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
-
Excoffier L, Smouse PE, Quattro JM. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 1992;131:479-91.
-
(1992)
Genetics
, vol.131
, pp. 479-491
-
-
Excoffier, L.1
Smouse, P.E.2
Quattro, J.M.3
-
35
-
-
17744381574
-
Bayesian coalescent inference of past population dynamics from molecular sequences
-
Drummond AJ, Rambaut A, Shapiro B, Pybus OG. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol 2005;22:1185-92.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1185-1192
-
-
Drummond, A.J.1
Rambaut, A.2
Shapiro, B.3
Pybus, O.G.4
-
36
-
-
38649110663
-
Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 2007;7:214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.B.2
-
37
-
-
33645816587
-
Assessment of methods for amino acid matrix selection and their use on empir - ical data shows that ad hoc assumptions for choice of matrix are not justified
-
Keane TM, Creevey CJ, Pentony MM, et al. Assessment of methods for amino acid matrix selection and their use on empir - ical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol Biol 2006;6:29.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 29
-
-
Keane, T.M.1
Creevey, C.J.2
Pentony, M.M.3
-
39
-
-
0037300228
-
Genetic effects on microsatellite diversity in wild emmer wheat (Triticum dicoccoides) at the Yehudiyya microsite, Israel
-
Li YC, Fahima T, Röder MS, et al. Genetic effects on microsatellite diversity in wild emmer wheat (Triticum dicoccoides) at the Yehudiyya microsite, Israel. Heredity 2003;90:150-6.
-
(2003)
Heredity
, vol.90
, pp. 150-156
-
-
Li, Y.C.1
Fahima, T.2
Röder, M.S.3
-
40
-
-
0030886378
-
Phylogenetic assessment of length variation at a microsatellite locus
-
Orti G, Pearse DE, Avise JC. Phylogenetic assessment of length variation at a microsatellite locus. Proc Natl Acad Sci USA 1997;94:10745-9.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 10745-10749
-
-
Orti, G.1
Pearse, D.E.2
Avise, J.C.3
-
41
-
-
0036735068
-
Dinucleotide microsatellite markers from the Antarctic seals and their use in other pinnipeds
-
Davis CS, Gelatt TS, Siniff D, Strobeck C. Dinucleotide microsatellite markers from the Antarctic seals and their use in other pinnipeds. Mol Ecol Notes 2002;2:203-8.
-
(2002)
Mol Ecol Notes
, vol.2
, pp. 203-208
-
-
Davis, C.S.1
Gelatt, T.S.2
Siniff, D.3
Strobeck, C.4
-
42
-
-
0031909825
-
Patterns of extensive genetic differentiation and variation among European harbor seals (Phoca vitulina vitulina) revealed using microsatellite DNA polymorphisms
-
Goodman SJ. Patterns of extensive genetic differentiation and variation among European harbor seals (Phoca vitulina vitulina) revealed using microsatellite DNA polymorphisms. Mol Biol Evol 1998;15:104-18.
-
(1998)
Mol Biol Evol
, vol.15
, pp. 104-118
-
-
Goodman, S.J.1
-
43
-
-
47649115949
-
Genetic estimates of contemporary effective population size: What can they tell us about the importance of genetic stochasticity for wild population persistence?
-
Palstra FP, Ruzzante DE. Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence? Mol Ecol 2008;17:3428-47.
-
(2008)
Mol Ecol
, vol.17
, pp. 3428-3447
-
-
Palstra, F.P.1
Ruzzante, D.E.2
-
44
-
-
0001921823
-
The critical effective size for a genetically secure population
-
Lynch M, Lande R. The critical effective size for a genetically secure population. Anim Conserv 1998;1:70-2.
-
(1998)
Anim Conserv
, vol.1
, pp. 70-72
-
-
Lynch, M.1
Lande, R.2
-
45
-
-
0002281255
-
How large must populations be to retain evolutionary potential?
-
Franklin I, Frankham R. How large must populations be to retain evolutionary potential? Anim Conserv 1998;1:69-73.
-
(1998)
Anim Conserv
, vol.1
, pp. 69-73
-
-
Franklin, I.1
Frankham, R.2
-
46
-
-
58149465765
-
Analysis of microsatellite and mitochondrial DNA in grey seals from 3 breeding areas in the Baltic Sea
-
Graves JA, Helyar A, Biuw M, et al. Analysis of microsatellite and mitochondrial DNA in grey seals from 3 breeding areas in the Baltic Sea. Conserv Biol 2009;10:59-68.
-
(2009)
Conserv Biol
, vol.10
, pp. 59-68
-
-
Graves, J.A.1
Helyar, A.2
Biuw, M.3
-
48
-
-
34047154500
-
Panmictic population structure in the hooded seal (Cystophora cristata)
-
Coltman DW, Stenson G, Hammill MO, et al. Panmictic population structure in the hooded seal (Cystophora cristata). Mol Ecol 2007;16:1639-48.
-
(2007)
Mol Ecol
, vol.16
, pp. 1639-1648
-
-
Coltman, D.W.1
Stenson, G.2
Hammill, M.O.3
-
49
-
-
0034687211
-
An empirical genetic assessment of the severity of the northern elephant seal population bottleneck
-
Weber DS, Stewart BS, Garza JC, Lehman N. An empirical genetic assessment of the severity of the northern elephant seal population bottleneck. Curr Biol 2000;10:1287-90.
-
(2000)
Curr Biol
, vol.10
, pp. 1287-1290
-
-
Weber, D.S.1
Stewart, B.S.2
Garza, J.C.3
Lehman, N.4
-
50
-
-
22844440900
-
Evaluating intraspecific "Network" construction methods using simulated sequence data: Do existing algorithms outperform the global maximum parsimony approach?
-
Cassens I, Mardulyn P, Milinkovitch MC. Evaluating intraspecific "Network" construction methods using simulated sequence data: do existing algorithms outperform the global maximum parsimony approach? Syst Biol 2005;54:363-72.
-
(2005)
Syst Biol
, vol.54
, pp. 363-372
-
-
Cassens, I.1
Mardulyn, P.2
Milinkovitch, M.C.3
-
51
-
-
12444340887
-
Evidence for male dispersal along the coasts but no migration in pelagic waters in dusky dolphins (Lagenorhynchus obscurus)
-
Cassens I, Van Waerebeek K, Best PB, et al. Evidence for male dispersal along the coasts but no migration in pelagic waters in dusky dolphins (Lagenorhynchus obscurus). Mol Ecol 2005;14:107-21.
-
(2005)
Mol Ecol
, vol.14
, pp. 107-121
-
-
Cassens, I.1
van Waerebeek, K.2
Best, P.B.3
-
52
-
-
23844524802
-
Population structure of nuclear and mitochondrial DNA variation among South American Burmeister's porpoises (Phocoena spinipinnis)
-
Rosa S, Milinkovitch MC, Van Waerebeek K, et al. Population structure of nuclear and mitochondrial DNA variation among South American Burmeister's porpoises (Phocoena spinipinnis). Conserv Genet 2005;6:431-43.
-
(2005)
Conserv Genet
, vol.6
, pp. 431-443
-
-
Rosa, S.1
Milinkovitch, M.C.2
van Waerebeek, K.3
-
53
-
-
31344448238
-
Abundance, seasonal haulout patterns and conservation of spotted seals Phoca largha along the coast of Bakryoung Island, South Korea
-
Won C, Yoo BH. Abundance, seasonal haulout patterns and conservation of spotted seals Phoca largha along the coast of Bakryoung Island, South Korea. Oryx 2004;38:109-12.
-
(2004)
Oryx
, vol.38
, pp. 109-112
-
-
Won, C.1
Yoo, B.H.2
|