-
1
-
-
77956276464
-
TRNA biology charges to the front
-
10.1101/gad.1956510 20810645
-
tRNA biology charges to the front. Phizicky EM, Hopper AK, Genes Dev 2010 24 1832 1860 10.1101/gad.1956510 20810645
-
(2010)
Genes Dev
, vol.24
, pp. 1832-1860
-
-
Phizicky, E.M.1
Hopper, A.K.2
-
2
-
-
77953694873
-
Conserved and divergent features of the structure and function of la and La-related proteins (LARPs)
-
20138158
-
Conserved and divergent features of the structure and function of La and La-related proteins (LARPs). Bayfield MA, Yang R, Maraia RJ, Biochim Biophys Acta 2010 1799 365 378 20138158
-
(2010)
Biochim Biophys Acta
, vol.1799
, pp. 365-378
-
-
Bayfield, M.A.1
Yang, R.2
Maraia, R.J.3
-
3
-
-
80052272097
-
3′ processing of eukaryotic precursor tRNAs
-
10.1002/wrna.64 21572561
-
3′ processing of eukaryotic precursor tRNAs. Maraia RJ, Lamichhane TN, WIREs RNA 2011 2 362 375 10.1002/wrna.64 21572561
-
(2011)
WIREs RNA
, vol.2
, pp. 362-375
-
-
Maraia, R.J.1
Lamichhane, T.N.2
-
4
-
-
33846956489
-
TRNase Z
-
10.2174/092986607779816050 17305600
-
tRNase Z. Ceballos M, Vioque A, Protein Pept Lett 2007 14 137 145 10.2174/092986607779816050 17305600
-
(2007)
Protein Pept Lett
, vol.14
, pp. 137-145
-
-
Ceballos, M.1
Vioque, A.2
-
5
-
-
59649083452
-
Chapter 8 the Making of tRNAs and More - RNase P and tRNase Z
-
Chapter 8 The Making of tRNAs and More-RNase P and tRNase Z. Hartmann RK, Gossringer M, Spath B, Fischer S, Marchfelder A, Prog Nucleic Acid Res Mol Biol 2009 85C 319 368
-
(2009)
Prog Nucleic Acid Res Mol Biol
, vol.85
, pp. 319-368
-
-
Hartmann, R.K.1
Gossringer, M.2
Spath, B.3
Fischer, S.4
Marchfelder, A.5
-
6
-
-
33947360611
-
When all's zed and done: The structure and function of RNase Z in prokaryotes
-
DOI 10.1038/nrmicro1622, PII NRMICRO1622
-
When all's zed and done: the structure and function of RNase Z in prokaryotes. Redko Y, Li de Lasierra-Gallay I, Condon C, Nat Rev Microbiol 2007 5 278 286 10.1038/nrmicro1622 17363966 (Pubitemid 46443604)
-
(2007)
Nature Reviews Microbiology
, vol.5
, Issue.4
, pp. 278-286
-
-
Redko, Y.1
Li De laSierra-Gallay, I.2
Condon, C.3
-
8
-
-
0035997370
-
The La protein
-
DOI 10.1146/annurev.biochem.71.090501.150003
-
The La protein. Wolin SL, Cedervall T, Annu Rev Biochem 2002 71 375 403 10.1146/annurev.biochem.71.090501.150003 12045101 (Pubitemid 34800225)
-
(2002)
Annual Review of Biochemistry
, vol.71
, pp. 375-403
-
-
Wolin, S.L.1
Cedervall, T.2
-
9
-
-
0031469506
-
The La protein in Schizosaccharomyces pombe: A conserved yet dispensable phosphoprotein that functions in tRNA maturation
-
The La protein in Schizosaccharomyces pombe: a conserved yet dispensable phosphoprotein that functions in tRNA maturation. Van Horn DJ, Yoo CJ, Xue D, Shi H, Wolin SL, RNA 1997 3 1434 1443 9404894 (Pubitemid 28006718)
-
(1997)
RNA
, vol.3
, Issue.12
, pp. 1434-1443
-
-
Van Horn, D.J.1
Yoo, C.J.2
Xue, D.3
Shi, H.4
Wolin, S.L.5
-
10
-
-
0030904723
-
The yeast La protein is required for the 3' endonucleolytic cleavage that matures tRNA precursors
-
DOI 10.1016/S0092-8674(00)80220-2
-
The yeast La protein is required for the 3′ endonucleolytic cleavage that matures tRNA precursors. Yoo CJ, Wolin SL, Cell 1997 89 393 402 10.1016/S0092-8674(00)80220-2 9150139 (Pubitemid 27220884)
-
(1997)
Cell
, vol.89
, Issue.3
, pp. 393-402
-
-
Yoo, C.J.1
Wolin, S.L.2
-
11
-
-
44149101017
-
Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation
-
DOI 10.1261/rna.1050408
-
Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. Copela LA, Fernandez CF, Sherrer RL, Wolin SL, RNA 2008 14 1214 1227 10.1261/rna.1050408 18456844 (Pubitemid 351717500)
-
(2008)
RNA
, vol.14
, Issue.6
, pp. 1214-1227
-
-
Copela, L.A.1
Fernandez, C.F.2
Sherrer, R.L.3
Wolin, S.L.4
-
12
-
-
23644440813
-
RNA maturation in mitochondria of S. cerevisiae and S. pombe
-
DOI 10.1016/j.gene.2005.03.032, PII S037811190500168X
-
RNA maturation in mitochondria of S. cerevisiae and S. pombe. Schafer B, Gene 2005 354 80 85 15913924 (Pubitemid 41116685)
-
(2005)
Gene
, vol.354
, Issue.SPEC. ISS. 1-2
, pp. 80-85
-
-
Schafer, B.1
-
13
-
-
0030267939
-
Regulation of gene expression in chloroplasts of higher plants
-
Regulation of gene expression in chloroplasts of higher plants. Sugita M, Sugiura M, Plant Mol Biol 1996 32 315 326 10.1007/BF00039388 8980485 (Pubitemid 27015363)
-
(1996)
Plant Molecular Biology
, vol.32
, Issue.1-2
, pp. 315-326
-
-
Sugita, M.1
Sugiura, M.2
-
14
-
-
0035135523
-
A candidate prostate cancer susceptibility gene at chromosome 17p
-
DOI 10.1038/84808
-
A candidate prostate cancer susceptibility gene at chromosome 17p. Tavtigian SV, Simard J, Teng DH, Abtin V, Baumgard M, Beck A, Camp NJ, Carillo AR, Chen Y, Dayananth P, Desrochers M, Dumont M, Farnham JM, Frank D, Frye C, Ghaffari S, Gupte JS, Hu R, Iliev D, Janecki T, Kort EN, Laity KE, Leavitt A, Leblanc G, McArthur-Morrison J, Pederson A, Penn B, Peterson KT, Reid JE, Richards S, et al. Nat Genet 2001 27 172 180 10.1038/84808 11175785 (Pubitemid 32157444)
-
(2001)
Nature Genetics
, vol.27
, Issue.2
, pp. 172-180
-
-
Tavtigian, S.V.1
Simard, J.2
Teng, D.H.F.3
Abtin, V.4
Baumgard, M.5
Beck, A.6
Camp, N.J.7
Carillo, A.R.8
Chen, Y.9
Dayananth, P.10
Desrochers, M.11
Dumont, M.12
Farnham, J.M.13
Frank, D.14
Frye, C.15
Ghaffari, S.16
Gupte, J.S.17
Hu, R.18
Iliev, D.19
Janecki, T.20
Kort, E.N.21
Laity, K.E.22
Leavitt, A.23
Leblanc, G.24
Mcarthur-Morrison, J.25
Pederson, A.26
Penn, B.27
Peterson, K.T.28
Reid, J.E.29
Richards, S.30
Schroeder, M.31
Smith, R.32
Snyder, S.C.33
Swedlund, B.34
Swensen, J.35
Thomas, A.36
Tranchant, M.37
Woodland, A.-M.38
Labrie, F.39
Skolnick, M.H.40
Neuhausen, S.41
Rommens, J.42
Cannon-Albright, L.A.43
more..
-
15
-
-
26444483970
-
Characterization of TRZ1, a yeast homolog of the human candidate prostate cancer susceptibility gene ELAC2 encoding tRNase Z
-
DOI 10.1186/1471-2199-6-12
-
Characterization of TRZ1, a yeast homolog of the human candidate prostate cancer susceptibility gene ELAC2 encoding tRNase Z. Chen Y, Beck A, Davenport C, Chen Y, Shattuck D, Tavtigian SV, BMC Mol Biol 2005 6 12 10.1186/1471-2199-6- 12 15892892 (Pubitemid 41418202)
-
(2005)
BMC Molecular Biology
, vol.6
, pp. 12
-
-
Chen, Y.1
Beck, A.2
Davenport, C.3
Chen, Y.4
Shattuck, D.5
Tavtigian, S.V.6
-
16
-
-
1242309516
-
Drosophila Rnase Z processes mitochondrial and nuclear pre-tRNA 3′ ends in vivo
-
DOI 10.1093/nar/gkh182
-
Drosophila RNase Z processes mitochondrial and nuclear pre-tRNA 3′ ends in vivo. Dubrovsky EB, Dubrovskaya VA, Levinger L, Schiffer S, Marchfelder A, Nucleic Acids Res 2004 32 255 262 10.1093/nar/gkh182 14715923 (Pubitemid 38228624)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.1
, pp. 255-262
-
-
Dubrovsky, E.B.1
Dubrovskaya, V.A.2
Levinger, L.3
Schiffer, S.4
Marchfelder, A.5
-
17
-
-
0346461447
-
The Caenorhabditis elegans homolog of the putative prostate cancer susceptibility gene ELAC2, hoe-1, plays a role in germline proliferation
-
DOI 10.1016/j.ydbio.2003.10.016
-
The Caenorhabditis elegans homolog of the putative prostate cancer susceptibility gene ELAC2, hoe-1, plays a role in germline proliferation. Smith MM, Levitan DJ, Dev Biol 2004 266 151 160 10.1016/j.ydbio.2003.10.016 14729485 (Pubitemid 38083202)
-
(2004)
Developmental Biology
, vol.266
, Issue.1
, pp. 151-160
-
-
Smith, M.M.1
Levitan, D.J.2
-
18
-
-
70249111171
-
L among Saccharomyces cerevisiae, Schizosaccharomyces pombe and humans
-
10.1042/BJ20090743 19555350
-
L among Saccharomyces cerevisiae, Schizosaccharomyces pombe and humans. Zhao Z, Su W, Yuan S, Huang Y, Biochem J 2009 422 483 492 10.1042/BJ20090743 19555350
-
(2009)
Biochem J
, vol.422
, pp. 483-492
-
-
Zhao, Z.1
Su, W.2
Yuan, S.3
Huang, Y.4
-
19
-
-
79952852361
-
Ls encoded by two different genes and differentially targeted to the nucleus and mitochondria
-
10.1042/BJ20101619 21208191
-
Ls encoded by two different genes and differentially targeted to the nucleus and mitochondria. Gan X, Yang J, Li J, Yu H, Dai H, Liu J, Huang Y, Biochem J 2011 435 103 111 10.1042/BJ20101619 21208191
-
(2011)
Biochem J
, vol.435
, pp. 103-111
-
-
Gan, X.1
Yang, J.2
Li, J.3
Yu, H.4
Dai, H.5
Liu, J.6
Huang, Y.7
-
20
-
-
67650129853
-
Arabidopsis encodes four tRNase Z enzymes
-
Arabidopsis encodes four tRNase Z enzymes. Canino G, Bocian E, Barbezier N, Echeverria M, Forner J, Binder S, Marchfelder A, Plant Physiol 2009 150 1491 1502
-
(2009)
Plant Physiol
, vol.150
, pp. 1491-1502
-
-
Canino, G.1
Bocian, E.2
Barbezier, N.3
Echeverria, M.4
Forner, J.5
Binder, S.6
Marchfelder, A.7
-
21
-
-
0033302071
-
An evolutionary classification of the metallo-beta-lactamase fold proteins
-
11471246
-
An evolutionary classification of the metallo-beta-lactamase fold proteins. Aravind L, In Silico Biol 1999 1 69 91 11471246
-
(1999)
Silico Biol
, vol.1
, pp. 69-91
-
-
Aravind, L.1
-
22
-
-
0035839131
-
Expansion of the zinc metallo-hydrolase family of the β-lactamase fold
-
DOI 10.1016/S0014-5793(01)02686-2, PII S0014579301026862
-
Expansion of the zinc metallo-hydrolase family of the beta-lactamase fold. Daiyasu H, Osaka K, Ishino Y, Toh H, FEBS Lett 2001 503 1 6 10.1016/S0014-5793(01)02686-2 11513844 (Pubitemid 32769945)
-
(2001)
FEBS Letters
, vol.503
, Issue.1
, pp. 1-6
-
-
Daiyasu, H.1
Osaka, K.2
Ishino, Y.3
Toh, H.4
-
23
-
-
34247157802
-
Nucleases of the metallo-β-lactamase family and their role in DNA and RNA metabolism
-
DOI 10.1080/10409230701279118, PII 777193843
-
Nucleases of the metallo-beta-lactamase family and their role in DNA and RNA metabolism. Dominski Z, Crit Rev Biochem Mol Biol 2007 42 67 93 10.1080/10409230701279118 17453916 (Pubitemid 46598189)
-
(2007)
Critical Reviews in Biochemistry and Molecular Biology
, vol.42
, Issue.2
, pp. 67-93
-
-
Dominski, Z.1
-
24
-
-
0037013852
-
Assigning a function to a conserved group of proteins: The tRNA 3′-processing enzymes
-
DOI 10.1093/emboj/21.11.2769
-
Assigning a function to a conserved group of proteins: the tRNA 3′-processing enzymes. Schiffer S, Rosch S, Marchfelder A, EMBO J 2002 21 2769 2777 10.1093/emboj/21.11.2769 12032089 (Pubitemid 34619392)
-
(2002)
EMBO Journal
, vol.21
, Issue.11
, pp. 2769-2777
-
-
Schiffer, S.1
Rosch, S.2
Marchfelder, A.3
-
25
-
-
14144251951
-
Structural basis for substrate binding, cleavage and allostery in the tRNA maturase RNase Z
-
DOI 10.1038/nature03284
-
Structural basis for substrate binding, cleavage and allostery in the tRNA maturase RNase Z. de la Sierra-Gallay IL, Pellegrini O, Condon C, Nature 2005 433 657 661 10.1038/nature03284 15654328 (Pubitemid 40283001)
-
(2005)
Nature
, vol.433
, Issue.7026
, pp. 657-661
-
-
De La Sierra-Gallay, I.L.1
Pellegrini, O.2
Condon, C.3
-
26
-
-
17144378531
-
Crystal structure of the tRNA 3′ processing endoribonuclease tRNase Z from Thermotoga maritima
-
DOI 10.1074/jbc.M500355200
-
Crystal structure of the tRNA 3′ processing endoribonuclease tRNase Z from Thermotoga maritima. Ishii R, Minagawa A, Takaku H, Takagi M, Nashimoto M, Yokoyama S, J Biol Chem 2005 280 14138 14144 10.1074/jbc.M500355200 15701599 (Pubitemid 40517316)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.14
, pp. 14138-14144
-
-
Ishii, R.1
Minagawa, A.2
Takaku, H.3
Takagi, M.4
Nashimoto, M.5
Yokoyama, S.6
-
27
-
-
32444437167
-
The crystal structure of the zinc phosphodiesterase from Escherichia coli provides insight into function and cooperativity of tRNase Z-family proteins
-
DOI 10.1128/JB.188.4.1607-1614.2006
-
The crystal structure of the zinc phosphodiesterase from Escherichia coli provides insight into function and cooperativity of tRNase Z-family proteins. Kostelecky B, Pohl E, Vogel A, Schilling O, Meyer-Klaucke W, J Bacteriol 2006 188 1607 1614 10.1128/JB.188.4.1607-1614.2006 16452444 (Pubitemid 43228694)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.4
, pp. 1607-1614
-
-
Kostelecky, B.1
Pohl, E.2
Vogel, A.3
Schilling, O.4
Meyer-Klaucke, W.5
-
28
-
-
33745022625
-
Structure of the ubiquitous 3′ processing enzyme RNase Z bound to transfer RNA
-
DOI 10.1038/nsmb1066, PII N1066
-
Structure of the ubiquitous 3′ processing enzyme RNase Z bound to transfer RNA. Li de la Sierra-Gallay I, Mathy N, Pellegrini O, Condon C, Nat Struct Mol Biol 2006 13 376 377 10.1038/nsmb1066 16518398 (Pubitemid 43873512)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.4
, pp. 376-377
-
-
Li De La Sierra-Gallay, I.1
Mathy, N.2
Pellegrini, O.3
Condon, C.4
-
29
-
-
33747845295
-
2+ rescue of two residues essential for the proton transfer of tRNase Z catalysis
-
DOI 10.1093/nar/gkl517
-
2+ rescue of two residues essential for the proton transfer of tRNase Z catalysis. Minagawa A, Takaku H, Ishii R, Takagi M, Yokoyama S, Nashimoto M, Nucleic Acids Res 2006 34 3811 3818 10.1093/nar/gkl517 16916792 (Pubitemid 44400430)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.13
, pp. 3811-3818
-
-
Minagawa, A.1
Takaku, H.2
Ishii, R.3
Takagi, M.4
Yokoyama, S.5
Nashimoto, M.6
-
30
-
-
2442616184
-
A Novel Endonucleolytic Mechanism to Generate the CCA 3′ Termini of tRNA Molecules in Thermotoga maritima
-
DOI 10.1074/jbc.M313951200
-
A novel endonucleolytic mechanism to generate the CCA 3′ termini of tRNA molecules in Thermotoga maritima. Minagawa A, Takaku H, Takagi M, Nashimoto M, J Biol Chem 2004 279 15688 15697 10.1074/jbc.M313951200 14749326 (Pubitemid 38618971)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.15
, pp. 15688-15697
-
-
Minagawa, A.1
Takaku, H.2
Takagi, M.3
Nashimoto, M.4
-
31
-
-
12844249496
-
Zinc- and iron-dependent cytosolic metallo-β-lactamase domain proteins exhibit similar zinc-binding affinities, independent of an atypical glutamate at the metal-binding site
-
DOI 10.1042/BJ20040773
-
Zinc- and iron-dependent cytosolic metallo-beta-lactamase domain proteins exhibit similar zinc-binding affinities, independent of an atypical glutamate at the metal-binding site. Schilling O, Vogel A, Kostelecky B, Natal da Luz H, Spemann D, Spath B, Marchfelder A, Troger W, Meyer-Klaucke W, Biochem J 2005 385 145 153 10.1042/BJ20040773 15324305 (Pubitemid 40164026)
-
(2005)
Biochemical Journal
, vol.385
, Issue.1
, pp. 145-153
-
-
Schilling, O.1
Vogel, A.2
Kostelecky, B.3
Natal Da Luz, H.4
Spemann, D.5
Spath, B.6
Marchfelder, A.7
Troger, W.8
Meyer-Klaucke, W.9
-
32
-
-
3142738641
-
Identification of metal binding residues for the binuclear zinc phosphodiesterase reveals identical coordination as glyoxalase II
-
DOI 10.1021/bi049703+
-
Identification of metal binding residues for the binuclear zinc phosphodiesterase reveals identical coordination as glyoxalase II. Vogel A, Schilling O, Meyer-Klaucke W, Biochemistry 2004 43 10379 10386 10.1021/bi049703+ 15301536 (Pubitemid 39079311)
-
(2004)
Biochemistry
, vol.43
, Issue.32
, pp. 10379-10386
-
-
Vogel, A.1
Schilling, O.2
Meyer-Klaucke, W.3
-
33
-
-
33646872034
-
Residues in two homology blocks on the amino side of the tRNase Z His domain contribute unexpectedly to pre-tRNA 3′ end processing
-
DOI 10.1261/rna.4206
-
Residues in two homology blocks on the amino side of the tRNase Z His domain contribute unexpectedly to pre-tRNA 3′ end processing. Zareen N, Hopkinson A, Levinger L, RNA 2006 12 1104 1115 10.1261/rna.4206 16618969 (Pubitemid 43788128)
-
(2006)
RNA
, vol.12
, Issue.6
, pp. 1104-1115
-
-
Zareen, N.1
Hopkinson, A.2
Levinger, L.3
-
34
-
-
20444395097
-
Residues in the conserved his domain of fruit fly tRNase Z that function in catalysis are not involved in substrate recognition or binding
-
DOI 10.1016/j.jmb.2005.04.073, PII S0022283605005061
-
Residues in the conserved His domain of fruit fly tRNase Z that function in catalysis are not involved in substrate recognition or binding. Zareen N, Yan H, Hopkinson A, Levinger L, J Mol Biol 2005 350 189 199 10.1016/j.jmb.2005.04. 073 15935379 (Pubitemid 40805455)
-
(2005)
Journal of Molecular Biology
, vol.350
, Issue.2
, pp. 189-199
-
-
Zareen, N.1
Yan, H.2
Hopkinson, A.3
Levinger, L.4
-
35
-
-
27444439481
-
Analysis of the functional modules of the tRNA 3′ endonuclease (tRNase Z)
-
DOI 10.1074/jbc.M506418200
-
Analysis of the functional modules of the tRNA 3′ endonuclease (tRNase Z). Spath B, Kirchner S, Vogel A, Schubert S, Meinlschmidt P, Aymanns S, Nezzar J, Marchfelder A, J Biol Chem 2005 280 35440 35447 10.1074/jbc. M506418200 16118225 (Pubitemid 41532734)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.42
, pp. 35440-35447
-
-
Spath, B.1
Kirchner, S.2
Vogel, A.3
Schubert, S.4
Meinlschmidt, P.5
Aymanns, S.6
Nezzar, J.7
Marchfelder, A.8
-
36
-
-
26844493853
-
Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II
-
DOI 10.1016/j.cell.2005.08.019, PII S009286740500824X
-
Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II. Baillat D, Hakimi MA, Naar AM, Shilatifard A, Cooch N, Shiekhattar R, Cell 2005 123 265 276 10.1016/j.cell.2005.08.019 16239144 (Pubitemid 41457216)
-
(2005)
Cell
, vol.123
, Issue.2
, pp. 265-276
-
-
Baillat, D.1
Hakimi, M.-A.2
Naar, A.M.3
Shilatifard, A.4
Cooch, N.5
Shiekhattar, R.6
-
37
-
-
33845719997
-
Maturation of the 5′ end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1
-
DOI 10.1111/j.1365-2958.2006.05499.x
-
Maturation of the 5' end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1. Britton RA, Wen T, Schaefer L, Pellegrini O, Uicker WC, Mathy N, Tobin C, Daou R, Szyk J, Condon C, Mol Microbiol 2007 63 127 138 10.1111/j.1365-2958.2006.05499.x 17229210 (Pubitemid 44968114)
-
(2007)
Molecular Microbiology
, vol.63
, Issue.1
, pp. 127-138
-
-
Britton, R.A.1
Wen, T.2
Schaefer, L.3
Pellegrini, O.4
Uicker, W.C.5
Mathy, N.6
Tobin, C.7
Daou, R.8
Szyk, J.9
Condon, C.10
-
38
-
-
34249101864
-
5′-to-3′ Exoribonuclease Activity in Bacteria: Role of RNase J1 in rRNA Maturation and 5′ Stability of mRNA
-
DOI 10.1016/j.cell.2007.02.051, PII S0092867407004503
-
5'-to-3′ exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA. Mathy N, Benard L, Pellegrini O, Daou R, Wen T, Condon C, Cell 2007 129 681 692 10.1016/j.cell.2007.02.051 17512403 (Pubitemid 46802375)
-
(2007)
Cell
, vol.129
, Issue.4
, pp. 681-692
-
-
Mathy, N.1
Benard, L.2
Pellegrini, O.3
Daou, R.4
Wen, T.5
Condon, C.6
-
39
-
-
20444425394
-
Exosite modules guide substrate recognition in the ZiPD/ElaC protein family
-
DOI 10.1074/jbc.M500591200
-
Exosite modules guide substrate recognition in the ZiPD/ElaC protein family. Schilling O, Spath B, Kostelecky B, Marchfelder A, Meyer-Klaucke W, Vogel A, J Biol Chem 2005 280 17857 17862 15699034 (Pubitemid 41389026)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.18
, pp. 17857-17862
-
-
Schilling, O.1
Spath, B.2
Kostelecky, B.3
Marchfelder, A.4
Meyer-Klaucke, W.5
Vogel, A.6
-
40
-
-
34548090500
-
tRNase Z catalysis and conserved residues on the carboxy side of the his cluster
-
DOI 10.1021/bi700578v
-
tRNase Z catalysis and conserved residues on the carboxy side of the His cluster. Karkashon S, Hopkinson A, Levinger L, Biochemistry 2007 46 9380 9387 10.1021/bi700578v 17655328 (Pubitemid 47291945)
-
(2007)
Biochemistry
, vol.46
, Issue.33
, pp. 9380-9387
-
-
Karkashon, S.1
Hopkinson, A.2
Levinger, L.3
-
41
-
-
67650147072
-
Effect of changes in the flexible arm on tRNase Z processing kinetics
-
10.1074/jbc.M900745200 19351879
-
Effect of changes in the flexible arm on tRNase Z processing kinetics. Levinger L, Hopkinson A, Desetty R, Wilson C, J Biol Chem 2009 284 15685 15691 10.1074/jbc.M900745200 19351879
-
(2009)
J Biol Chem
, vol.284
, pp. 15685-15691
-
-
Levinger, L.1
Hopkinson, A.2
Desetty, R.3
Wilson, C.4
-
42
-
-
56349113455
-
3′ end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA
-
10.1016/j.cell.2008.10.012 19041754
-
3′ end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA. Wilusz JE, Freier SM, Spector DL, Cell 2008 135 919 932 10.1016/j.cell.2008.10.012 19041754
-
(2008)
Cell
, vol.135
, pp. 919-932
-
-
Wilusz, J.E.1
Freier, S.M.2
Spector, D.L.3
-
43
-
-
77950202393
-
Human tRNA-derived small RNAs in the global regulation of RNA silencing
-
10.1261/rna.2000810 20181738
-
Human tRNA-derived small RNAs in the global regulation of RNA silencing. Haussecker D, Huang Y, Lau A, Parameswaran P, Fire AZ, Kay MA, RNA 2010 16 673 695 10.1261/rna.2000810 20181738
-
(2010)
RNA
, vol.16
, pp. 673-695
-
-
Haussecker, D.1
Huang, Y.2
Lau, A.3
Parameswaran, P.4
Fire, A.Z.5
Kay, M.A.6
-
44
-
-
72749089855
-
A novel class of small RNAs: TRNA-derived RNA fragments (tRFs)
-
10.1101/gad.1837609 19933153
-
A novel class of small RNAs: tRNA-derived RNA fragments (tRFs). Lee YS, Shibata Y, Malhotra A, Dutta A, Genes Dev 2009 23 2639 2649 10.1101/gad.1837609 19933153
-
(2009)
Genes Dev
, vol.23
, pp. 2639-2649
-
-
Lee, Y.S.1
Shibata, Y.2
Malhotra, A.3
Dutta, A.4
-
45
-
-
73649109602
-
A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral MicroRNAs
-
10.1016/j.molcel.2009.12.016 20129062
-
A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral MicroRNAs. Bogerd HP, Karnowski HW, Cai X, Shin J, Pohlers M, Cullen BR, Mol Cell 2010 37 135 142 10.1016/j.molcel.2009.12.016 20129062
-
(2010)
Mol Cell
, vol.37
, pp. 135-142
-
-
Bogerd, H.P.1
Karnowski, H.W.2
Cai, X.3
Shin, J.4
Pohlers, M.5
Cullen, B.R.6
-
46
-
-
75649119703
-
Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters
-
10.1261/rna.1873910 19948768
-
Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters. Diebel KW, Smith AL, van Dyk LF, RNA 2010 16 170 185 10.1261/rna.1873910 19948768
-
(2010)
RNA
, vol.16
, pp. 170-185
-
-
Diebel, K.W.1
Smith, A.L.2
Van Dyk, L.F.3
-
47
-
-
0037431434
-
The product of the candidate prostate cancer susceptibility gene ELAC2 interacts with the γ-tubulin complex
-
DOI 10.1002/ijc.10945
-
The product of the candidate prostate cancer susceptibility gene ELAC2 interacts with the gamma-tubulin complex. Korver W, Guevara C, Chen Y, Neuteboom S, Bookstein R, Tavtigian S, Lees E, Int J Cancer 2003 104 283 288 10.1002/ijc.10945 12569551 (Pubitemid 36249810)
-
(2003)
International Journal of Cancer
, vol.104
, Issue.3
, pp. 283-288
-
-
Korver, W.1
Guevara, C.2
Chen, Y.3
Neuteboom, S.4
Bookstein, R.5
Tavtigian, S.6
Lees, E.7
-
48
-
-
33748659836
-
ELAC2, a putative prostate cancer susceptibility gene product, potentiates TGF-β/Smad-induced growth arrest of prostate cells
-
DOI 10.1038/sj.onc.1209571, PII 1209571
-
ELAC2, a putative prostate cancer susceptibility gene product, potentiates TGF-beta/Smad-induced growth arrest of prostate cells. Noda D, Itoh S, Watanabe Y, Inamitsu M, Dennler S, Itoh F, Koike S, Danielpour D, Ten Dijke P, Kato M, Oncogene 2006 25 5591 5600 10.1038/sj.onc.1209571 16636667 (Pubitemid 44387615)
-
(2006)
Oncogene
, vol.25
, Issue.41
, pp. 5591-5600
-
-
Noda, D.1
Itoh, S.2
Watanabe, Y.3
Inamitsu, M.4
Dennler, S.5
Itoh, F.6
Koike, S.7
Danielpour, D.8
Ten Dijke, P.9
Kato, M.10
-
49
-
-
66749150948
-
How do human cells react to the absence of mitochondrial DNA?
-
10.1371/journal.pone.0005713 19492094
-
How do human cells react to the absence of mitochondrial DNA? Mineri R, Pavelka N, Fernandez-Vizarra E, Ricciardi-Castagnoli P, Zeviani M, Tiranti V, PloS one 2009 4 5713 10.1371/journal.pone.0005713 19492094
-
(2009)
PloS One
, vol.4
, pp. 55713
-
-
Mineri, R.1
Pavelka, N.2
Fernandez-Vizarra, E.3
Ricciardi-Castagnoli, P.4
Zeviani, M.5
Tiranti, V.6
-
50
-
-
0037708880
-
A panoramic view of yeast noncoding RNA processing
-
DOI 10.1016/S0092-8674(03)00466-5
-
A panoramic view of yeast noncoding RNA processing. Peng WT, Robinson MD, Mnaimneh S, Krogan NJ, Cagney G, Morris Q, Davierwala AP, Grigull J, Yang X, Zhang W, Mitsakakis N, Ryan OW, Datta N, Jojic V, Pal C, Canadien V, Richards D, Beattie B, Wu LF, Altschuler SJ, Roweis S, Frey BJ, Emili A, Greenblatt JF, Hughes TR, Cell 2003 113 919 933 10.1016/S0092-8674(03)00466-5 12837249 (Pubitemid 36792034)
-
(2003)
Cell
, vol.113
, Issue.7
, pp. 919-933
-
-
Peng, W.-T.1
Robinson, M.D.2
Mnaimneh, S.3
Krogan, N.J.4
Cagney, G.5
Morris, Q.6
Davierwala, A.P.7
Grigull, J.8
Yang, X.9
Zhang, W.10
Mitsakakis, N.11
Ryan, O.W.12
Datta, N.13
Jojic, V.14
Pal, C.15
Canadien, V.16
Richards, D.17
Beattie, B.18
Wu, L.F.19
Altschuler, S.J.20
Roweis, S.21
Frey, B.J.22
Emili, A.23
Greenblatt, J.F.24
Hughes, T.R.25
more..
-
51
-
-
77956468959
-
Identification and analysis of candidate fungal tRNA 3′-end processing endonucleases tRNase Zs, homologs of the putative prostate cancer susceptibility protein ELAC2
-
10.1186/1471-2148-10-272 20819227
-
Identification and analysis of candidate fungal tRNA 3′-end processing endonucleases tRNase Zs, homologs of the putative prostate cancer susceptibility protein ELAC2. Zhao W, Yu H, Li S, Huang Y, BMC Evol Biol 2010 10 272 10.1186/1471-2148-10-272 20819227
-
(2010)
BMC Evol Biol
, vol.10
, pp. 272
-
-
Zhao, W.1
Yu, H.2
Li, S.3
Huang, Y.4
-
52
-
-
29044449835
-
The tRNase Z family of proteins: Physiological functions, substrate specificity and structural properties
-
DOI 10.1515/BC.2005.142
-
The tRNase Z family of proteins: physiological functions, substrate specificity and structural properties. Vogel A, Schilling O, Spath B, Marchfelder A, Biol Chem 2005 386 1253 1264 10.1515/BC.2005.142 16336119 (Pubitemid 41790808)
-
(2005)
Biological Chemistry
, vol.386
, Issue.12
, pp. 1253-1264
-
-
Vogel, A.1
Schilling, O.2
Spath, B.3
Marchfelder, A.4
-
53
-
-
11144321346
-
Mechanisms of protein import and routing in chloroplasts
-
DOI 10.1016/j.cub.2004.11.049, PII S0960982204009388
-
Mechanisms of protein import and routing in chloroplasts. Jarvis P, Robinson C, Curr Biol 2004 14 1064 1077 10.1016/j.cub.2004.11.049 15620643 (Pubitemid 40033353)
-
(2004)
Current Biology
, vol.14
, Issue.24
-
-
Jarvis, P.1
Robinson, C.2
-
54
-
-
0025360581
-
The mitochondrial protein import apparatus
-
10.1146/annurev.bi.59.070190.001555 2197978
-
The mitochondrial protein import apparatus. Pfanner N, Neupert W, Annu Rev Biochem 1990 59 331 353 10.1146/annurev.bi.59.070190.001555 2197978
-
(1990)
Annu Rev Biochem
, vol.59
, pp. 331-353
-
-
Pfanner, N.1
Neupert, W.2
-
55
-
-
0026570259
-
Cleavage specificity of chloroplast and nuclear tRNA 3′-processing nucleases
-
1732750
-
Cleavage specificity of chloroplast and nuclear tRNA 3′-processing nucleases. Oommen A, Li XQ, Gegenheimer P, Mol Cell Biol 1992 12 865 875 1732750
-
(1992)
Mol Cell Biol
, vol.12
, pp. 865-875
-
-
Oommen, A.1
Li, X.Q.2
Gegenheimer, P.3
-
56
-
-
14744277777
-
Polyploidy and genome evolution in plants
-
DOI 10.1016/j.pbi.2005.01.001, Genome Studies and Molecular Genetics / Plant Biotechnology
-
Polyploidy and genome evolution in plants. Adams KL, Wendel JF, Curr Opin Plant Biol 2005 8 135 141 10.1016/j.pbi.2005.01.001 15752992 (Pubitemid 40323541)
-
(2005)
Current Opinion in Plant Biology
, vol.8
, Issue.2
, pp. 135-141
-
-
Adams, K.L.1
Wendel, J.F.2
-
57
-
-
46749129676
-
S gene expression
-
10.1016/j.febslet.2008.06.020 18573253
-
S gene expression. Takahashi M, Takaku H, Nashimoto M, FEBS Lett 2008 582 2532 2536 10.1016/j.febslet.2008. 06.020 18573253
-
(2008)
FEBS Lett
, vol.582
, pp. 2532-2536
-
-
Takahashi, M.1
Takaku, H.2
Nashimoto, M.3
-
58
-
-
0033057704
-
The 3' end CCA of mature tRNA is an antideterminant for eukaryotic 3'- tRNase
-
DOI 10.1017/S1355838299981256
-
The 3′ end CCA of mature tRNA is an antideterminant for eukaryotic 3′-tRNase. Mohan A, Whyte S, Wang X, Nashimoto M, Levinger L, RNA 1999 5 245 256 10.1017/S1355838299981256 10024176 (Pubitemid 29079284)
-
(1999)
RNA
, vol.5
, Issue.2
, pp. 245-256
-
-
Mohan, A.1
Whyte, S.2
Wang, X.3
Nashimoto, M.4
Levinger, L.5
-
59
-
-
0030754921
-
Distribution of both lengths and 5' terminal nucleotides of mammalian pre-tRNA 3' trailers reflects properties of 3' processing endoribonuclease
-
DOI 10.1093/nar/25.6.1148
-
Distribution of both lengths and 5' terminal nucleotides of mammalian pre-tRNA 3′ trailers reflects properties of 3′ processing endoribonuclease. Nashimoto M, Nucleic Acids Res 1997 25 1148 1154 10.1093/nar/25.6.1148 9092623 (Pubitemid 27303205)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.6
, pp. 1148-1154
-
-
Nashimoto, M.1
-
60
-
-
0043239333
-
Endonucleolytic processing of CCA-less tRNA precursors by RNase Z in Bacillus subtilis
-
DOI 10.1093/emboj/cdg435
-
Endonucleolytic processing of CCA-less tRNA precursors by RNase Z in Bacillus subtilis. Pellegrini O, Nezzar J, Marchfelder A, Putzer H, Condon C, EMBO J 2003 22 4534 4543 10.1093/emboj/cdg435 12941704 (Pubitemid 37087206)
-
(2003)
EMBO Journal
, vol.22
, Issue.17
, pp. 4534-4543
-
-
Pellegrini, O.1
Nezzar, J.2
Marchfelder, A.3
Putzer, H.4
Condon, C.5
-
61
-
-
0038743281
-
Recombinant RNase Z does not recognize CCA as part of the tRNA and its cleavage efficieny is influenced by acceptor stem lenght
-
DOI 10.1515/BC.2003.039
-
Recombinant RNase Z does not recognize CCA as part of the tRNA and its cleavage efficieny is influenced by acceptor stem length. Schiffer S, Rosch S, Marchfelder A, Biol Chem 2003 384 333 342 10.1515/BC.2003.039 12715884 (Pubitemid 36527640)
-
(2003)
Biological Chemistry
, vol.384
, Issue.3
, pp. 333-342
-
-
Schiffer, S.1
Rosch, S.2
Marchfelder, A.3
-
62
-
-
47049123151
-
The flexible arm of tRNase Z is not essential for pre-tRNA binding but affects cleavage site selection
-
10.1016/j.jmb.2008.05.016 18602113
-
The flexible arm of tRNase Z is not essential for pre-tRNA binding but affects cleavage site selection. Minagawa A, Ishii R, Takaku H, Yokoyama S, Nashimoto M, J Mol Biol 2008 381 289 299 10.1016/j.jmb.2008.05.016 18602113
-
(2008)
J Mol Biol
, vol.381
, pp. 289-299
-
-
Minagawa, A.1
Ishii, R.2
Takaku, H.3
Yokoyama, S.4
Nashimoto, M.5
-
63
-
-
45849116212
-
Effects of conserved D/T loop substitutions in the pre-tRNA substrate on tRNase Z catalysis
-
Effects of conserved D/T loop substitutions in the pre-tRNA substrate on tRNase Z catalysis. Hopkinson A, Levinger L, RNA Biol 2008 5 104 111 10.4161/rna.5.2.6086 18421255 (Pubitemid 351881378)
-
(2008)
RNA Biology
, vol.5
, Issue.2
, pp. 104-111
-
-
Hopkinson, A.1
Levinger, L.2
-
64
-
-
34547634674
-
The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes
-
DOI 10.1107/S1744309107033623, PII S1744309107033623
-
The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes. Ishii R, Minagawa A, Takaku H, Takagi M, Nashimoto M, Yokoyama S, Acta Crystallogr Sect F Struct Biol Cryst Commun 2007 63 637 641 10.1107/S1744309107033623 17671357 (Pubitemid 47205211)
-
(2007)
Acta Crystallographica Section F: Structural Biology and Crystallization Communications
, vol.63
, Issue.8
, pp. 637-641
-
-
Ishii, R.1
Minagawa, A.2
Takaku, H.3
Takagi, M.4
Nashimoto, M.5
Yokoyama, S.6
-
65
-
-
79953234509
-
A global picture of tRNA genes in plant genomes
-
A global picture of tRNA genes in plant genomes. Michaud M, Cognat V, Duchene AM, Marechal-Drouard L, Plant J 2010 66 80 93
-
(2010)
Plant J
, vol.66
, pp. 80-93
-
-
Michaud, M.1
Cognat, V.2
Duchene, A.M.3
Marechal-Drouard, L.4
-
66
-
-
0023664069
-
Adjustment of the tRNA population to the codon usage in chloroplasts
-
10.1093/nar/15.4.1377 3822833
-
Adjustment of the tRNA population to the codon usage in chloroplasts. Pfitzinger H, Guillemaut P, Weil JH, Pillay DT, Nucleic Acids Res 1987 15 1377 1386 10.1093/nar/15.4.1377 3822833
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1377-1386
-
-
Pfitzinger, H.1
Guillemaut, P.2
Weil, J.H.3
Pillay, D.T.4
-
67
-
-
25844523814
-
Sequence-dependent cleavage site selection by RNase Z from the cyanobacterium synechocystis sp. PCC 6803
-
DOI 10.1074/jbc.M504691200
-
Sequence-dependent Cleavage Site Selection by RNase Z from the Cyanobacterium Synechocystis sp. PCC 6803. Ceballos-Chavez M, Vioque A, J Biol Chem 2005 280 33461 33469 10.1074/jbc.M504691200 16051605 (Pubitemid 41397145)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.39
, pp. 33461-33469
-
-
Ceballos-Chavez, M.1
Vioque, A.2
-
68
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
DOI 10.1093/bioinformatics/btm404
-
Clustal W and Clustal X version 2.0. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG, Bioinformatics 2007 23 2947 2948 10.1093/bioinformatics/btm404 17846036 (Pubitemid 350162903)
-
(2007)
Bioinformatics
, vol.23
, Issue.21
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
Mcgettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
69
-
-
79957613599
-
MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
-
MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, Mol Biol Evol 2011
-
(2011)
Mol Biol Evol
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
70
-
-
18744382506
-
ProtTest: Selection of best-fit models of protein evolution
-
DOI 10.1093/bioinformatics/bti263
-
ProtTest: selection of best-fit models of protein evolution. Abascal F, Zardoya R, Posada D, Bioinformatics 2005 21 2104 2105 10.1093/bioinformatics/ bti263 15647292 (Pubitemid 40668057)
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
71
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
DOI 10.1093/bioinformatics/btg180
-
MrBayes 3: Bayesian phylogenetic inference under mixed models. Ronquist F, Huelsenbeck JP, Bioinformatics 2003 19 1572 1574 10.1093/bioinformatics/ btg180 12912839 (Pubitemid 37038874)
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
72
-
-
20444465226
-
The RNase Z homologue encoded by Escherichia coli elaC gene is RNase BN
-
DOI 10.1074/jbc.C500098200
-
The RNase Z homologue encoded by Escherichia coli elaC gene is RNase BN. Ezraty B, Dahlgren B, Deutscher MP, J Biol Chem 2005 280 16542 16545 10.1074/jbc.C500098200 15764599 (Pubitemid 41389108)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.17
, pp. 16542-16545
-
-
Ezraty, B.1
Dahlgren, B.2
Deutscher, M.P.3
-
73
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
DOI 10.1038/35048692
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Initiative TAG, Nature 2000 408 796 815 10.1038/35048692 11130711 (Pubitemid 32016083)
-
(2000)
Nature
, vol.408
, Issue.6814
, pp. 796-815
-
-
Kaul, S.1
Koo, H.L.2
Jenkins, J.3
Rizzo, M.4
Rooney, T.5
Tallon, L.J.6
Feldblyum, T.7
Nierman, W.8
Benito, M.-I.9
Lin, X.10
Town, C.D.11
Venter, J.C.12
Fraser, C.M.13
Tabata, S.14
Nakamura, Y.15
Kaneko, T.16
Sato, S.17
Asamizu, E.18
Kato, T.19
Kotani, H.20
Sasamoto, S.21
Ecker, J.R.22
Theologis, A.23
Federspiel, N.A.24
Palm, C.J.25
Osborne, B.I.26
Shinn, P.27
Conway, A.B.28
Vysotskaia, V.S.29
Dewar, K.30
Conn, L.31
Lenz, C.A.32
Kim, C.J.33
Hansen, N.F.34
Liu, S.X.35
Buehler, E.36
Altafi, H.37
Sakano, H.38
Dunn, P.39
Lam, B.40
Pham, P.K.41
Chao, Q.42
Nguyen, M.43
Yu, G.44
Chen, H.45
Southwick, A.46
Jeong Mi Lee47
Miranda, M.48
Toriumi, M.J.49
Davis, R.W.50
Wambutt, R.51
Murphy, G.52
Dusterhoft, A.53
Stiekema, W.54
Pohl, T.55
Entian, K.-D.56
Terryn, N.57
Volckaert, G.58
Salanoubat, M.59
Choisne, N.60
Rieger, M.61
Ansorge, W.62
Unseld, M.63
Fartmann, B.64
Valle, G.65
Artiguenave, F.66
Weissenbach, J.67
Quetier, F.68
Wilson, R.K.69
De La Bastide, M.70
Sekhon, M.71
Huang, E.72
Spiegel, L.73
Gnoj, L.74
Pepin, K.75
Murray, J.76
Johnson, D.77
Habermann, K.78
Dedhia, N.79
Parnell, L.80
Preston, R.81
Hillier, L.82
Chen, E.83
Marra, M.84
Martienssen, R.85
McCombie, W.R.86
Mayer, K.87
White, O.88
Bevan, M.89
Lemcke, K.90
Creasy, T.H.91
Bielke, C.92
Haas, B.93
Haase, D.94
Maiti, R.95
Rudd, S.96
Peterson, J.97
Schoof, H.98
Frishman, D.99
more..
-
74
-
-
76749150030
-
Genome sequencing and analysis of the model grass Brachypodium distachyon
-
Genome sequencing and analysis of the model grass Brachypodium distachyon. Initiative TIB, Nature 463 763 768
-
Nature
, vol.463
, pp. 763-768
-
-
Initiative, T.I.B.1
-
75
-
-
42949157236
-
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
-
DOI 10.1038/nature06856, PII NATURE06856
-
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, Chen C, Qian W, Shen J, Du P, Eustice M, Tong E, Tang H, Lyons E, Paull RE, Michael TP, Wall K, Rice DW, Albert H, Wang ML, Zhu YJ, et al. Nature 2008 452 991 996 10.1038/nature06856 18432245 (Pubitemid 351606145)
-
(2008)
Nature
, vol.452
, Issue.7190
, pp. 991-996
-
-
Ming, R.1
Hou, S.2
Feng, Y.3
Yu, Q.4
Dionne-Laporte, A.5
Saw, J.H.6
Senin, P.7
Wang, W.8
Ly, B.V.9
Lewis, K.L.T.10
Salzberg, S.L.11
Feng, L.12
Jones, M.R.13
Skelton, R.L.14
Murray, J.E.15
Chen, C.16
Qian, W.17
Shen, J.18
Du, P.19
Eustice, M.20
Tong, E.21
Tang, H.22
Lyons, E.23
Paull, R.E.24
Michael, T.P.25
Wall, K.26
Rice, D.W.27
Albert, H.28
Wang, M.-L.29
Zhu, Y.J.30
Schatz, M.31
Nagarajan, N.32
Acob, R.A.33
Guan, P.34
Blas, A.35
Wai, C.M.36
Ackerman, C.M.37
Ren, Y.38
Liu, C.39
Wang, J.40
Wang, J.41
Na, J.-K.42
Shakirov, E.V.43
Haas, B.44
Thimmapuram, J.45
Nelson, D.46
Wang, X.47
Bowers, J.E.48
Gschwend, A.R.49
Delcher, A.L.50
Singh, R.51
Suzuki, J.Y.52
Tripathi, S.53
Neupane, K.54
Wei, H.55
Irikura, B.56
Paidi, M.57
Jiang, N.58
Zhang, W.59
Presting, G.60
Windsor, A.61
Navajas-Perez, R.62
Torres, M.J.63
Feltus, F.A.64
Porter, B.65
Li, Y.66
Burroughs, A.M.67
Luo, M.-C.68
Liu, L.69
Christopher, D.A.70
Mount, S.M.71
Moore, P.H.72
Sugimura, T.73
Jiang, J.74
Schuler, M.A.75
Friedman, V.76
Mitchell-Olds, T.77
Shippen, D.E.78
Depamphilis, C.W.79
Palmer, J.D.80
Freeling, M.81
Paterson, A.H.82
Gonsalves, D.83
Wang, L.84
Alam, M.85
more..
-
76
-
-
70649085835
-
The genome of the cucumber, Cucumis sativus L
-
10.1038/ng.475 19881527
-
The genome of the cucumber, Cucumis sativus L. Huang S, Li R, Zhang Z, Li L, Gu X, Fan W, Lucas WJ, Wang X, Xie B, Ni P, et al. Nat Genet 2009 41 1275 1281 10.1038/ng.475 19881527
-
(2009)
Nat Genet
, vol.41
, pp. 1275-1281
-
-
Huang, S.1
Li, R.2
Zhang, Z.3
Li, L.4
Gu, X.5
Fan, W.6
Lucas, W.J.7
Wang, X.8
Xie, B.9
Ni, P.10
-
77
-
-
74549221016
-
Genome sequence of the Palaeopolyploid soybean
-
Genome sequence of the Palaeopolyploid soybean. Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, Xu D, Hellsten U, May GD, Yu Y, Sakurai T, Umezawa T, Bhattacharyya MK, Sandhu D, Valliyodan B, Lindquist E, Peto M, Grant D, Shu S, Goodstein D, Barry K, Futrell-Griggs M, Abernathy B, Du J, Tian Z, Zhu L, et al. Nature 463 178 183
-
Nature
, vol.463
, pp. 178-183
-
-
Schmutz, J.1
Cannon, S.B.2
Schlueter, J.3
Ma, J.4
Mitros, T.5
Nelson, W.6
Hyten, D.L.7
Song, Q.8
Thelen, J.J.9
Cheng, J.10
Xu, D.11
Hellsten, U.12
May, G.D.13
Yu, Y.14
Sakurai, T.15
Umezawa, T.16
Bhattacharyya, M.K.17
Sandhu, D.18
Valliyodan, B.19
Lindquist, E.20
Peto, M.21
Grant, D.22
Shu, S.23
Goodstein, D.24
Barry, K.25
Futrell-Griggs, M.26
Abernathy, B.27
Du, J.28
Tian, Z.29
Zhu, L.30
more..
-
78
-
-
84907150192
-
The map-based sequence of the rice genome
-
DOI 10.1038/nature03895
-
The map-based sequence of the rice genome. Project IRGS, Nature 2005 436 793 800 10.1038/nature03895 16100779 (Pubitemid 41160631)
-
(2005)
Nature
, vol.436
, Issue.7052
, pp. 793-800
-
-
Sasaki, T.1
-
79
-
-
33748760611
-
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
-
DOI 10.1126/science.1128691
-
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, et al. Science 2006 313 1596 1604 10.1126/science.1128691 16973872 (Pubitemid 44414027)
-
(2006)
Science
, vol.313
, Issue.5793
, pp. 1596-1604
-
-
Tuskan, G.A.1
DiFazio, S.2
Jansson, S.3
Bohlmann, J.4
Grigoriev, I.5
Hellsten, U.6
Putnam, M.7
Ralph, S.8
Rombauts, S.9
Salamov, A.10
Schein, J.11
Sterck, L.12
Aerts, A.13
Bhalerao, R.R.14
Bhalerao, R.P.15
Blaudez, D.16
Boerjan, W.17
Brun, A.18
Brunner, A.19
Busov, V.20
Campbell, M.21
Carlson, J.22
Chalot, M.23
Chapman, J.24
Chen, G.-L.25
Cooper, D.26
Coutinho, P.M.27
Couturier, J.28
Covert, S.29
Cronk, Q.30
more..
-
80
-
-
77956656511
-
Draft genome sequence of the oilseed species Ricinus communis
-
Draft genome sequence of the oilseed species Ricinus communis. Chan AP, Crabtree J, Zhao Q, Lorenzi H, Orvis J, Puiu D, Melake-Berhan A, Jones KM, Redman J, Chen G, Cahoon EB, Gedil M, Stanke M, Haas BJ, Wortman JR, Fraser-Liggett CM, Ravel J, Rabinowicz PD, Nat Biotechnol 28 951 956
-
Nat Biotechnol
, vol.28
, pp. 951-956
-
-
Chan, A.P.1
Crabtree, J.2
Zhao, Q.3
Lorenzi, H.4
Orvis, J.5
Puiu, D.6
Melake-Berhan, A.7
Jones, K.M.8
Redman, J.9
Chen, G.10
Cahoon, E.B.11
Gedil, M.12
Stanke, M.13
Haas, B.J.14
Wortman, J.R.15
Fraser-Liggett, C.M.16
Ravel, J.17
Rabinowicz, P.D.18
-
81
-
-
58449100024
-
Foxtail millet: A sequence-driven grass model system
-
10.1104/pp.108.129627 19126705
-
Foxtail millet: a sequence-driven grass model system. Doust AN, Kellogg EA, Devos KM, Bennetzen JL, Plant Physiol 2009 149 137 141 10.1104/pp.108.129627 19126705
-
(2009)
Plant Physiol
, vol.149
, pp. 137-141
-
-
Doust, A.N.1
Kellogg, E.A.2
Devos, K.M.3
Bennetzen, J.L.4
-
82
-
-
58449137410
-
The Sorghum bicolor genome and the diversification of grasses
-
10.1038/nature07723 19189423
-
The Sorghum bicolor genome and the diversification of grasses. Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, et al. Nature 2009 457 551 556 10.1038/nature07723 19189423
-
(2009)
Nature
, vol.457
, pp. 551-556
-
-
Paterson, A.H.1
Bowers, J.E.2
Bruggmann, R.3
Dubchak, I.4
Grimwood, J.5
Gundlach, H.6
Haberer, G.7
Hellsten, U.8
Mitros, T.9
Poliakov, A.10
Schmutz, J.11
Spannagl, M.12
Tang, H.13
Wang, X.14
Wicker, T.15
Bharti, A.K.16
Chapman, J.17
Feltus, F.A.18
Gowik, U.19
Grigoriev, I.V.20
Lyons, E.21
Maher, C.A.22
Martis, M.23
Narechania, A.24
Otillar, R.P.25
Penning, B.W.26
Salamov, A.A.27
Wang, Y.28
Zhang, L.29
Carpita, N.C.30
more..
-
83
-
-
41249098849
-
A high quality draft consensus sequence of the genome of a heterozygous grapevine variety
-
DOI 10.1371/journal.pone.0001326
-
A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. Velasco R, Zharkikh A, Troggio M, Cartwright DA, Cestaro A, Pruss D, Pindo M, Fitzgerald LM, Vezzulli S, Reid J, Malacarne G, Iliev D, Coppola G, Wardell B, Micheletti D, Macalma T, Facci M, Mitchell JT, Perazzolli M, Eldredge G, Gatto P, Oyzerski R, Moretto M, Gutin N, Stefanini M, Chen Y, Segala C, Davenport C, Dematte L, Mraz A, et al. PloS one 2007 2 1326 10.1371/journal.pone.0001326 18094749 (Pubitemid 351736596)
-
(2007)
PLoS ONE
, vol.2
, Issue.12
-
-
Velasco, R.1
Zharkikh, A.2
Troggio, M.3
Cartwright, D.A.4
Cestaro, A.5
Pruss, D.6
Pindo, M.7
FitzGerald, L.M.8
Vezzulli, S.9
Reid, J.10
Malacarne, G.11
Iliev, D.12
Coppola, G.13
Wardell, B.14
Micheletti, D.15
Macalma, T.16
Facci, M.17
Mitchell, J.T.18
Perazzolli, M.19
Eldredge, G.20
Gatto, P.21
Oyzerski, R.22
Moretto, M.23
Gutin, N.24
Stefanini, M.25
Chen, Y.26
Segala, C.27
Davenport, C.28
Dematte, L.29
Mraz, A.30
Battilana, J.31
Stormo, K.32
Costa, F.33
Tao, Q.34
Si-Ammour, A.35
Harkins, T.36
Lackey, A.37
Perbost, C.38
Taillon, B.39
Stella, A.40
Solovyev, V.41
Fawcett, J.A.42
Sterck, L.43
Vandepoele, K.44
Grando, S.M.45
Toppo, S.46
Moser, C.47
Lanchbury, J.48
Bogden, R.49
Skolnick, M.50
Sgaremella, V.51
Bhatnagar, S.K.52
Fontana, P.53
Gutin, A.54
Van De Peer, Y.55
Salamini, F.56
Viola, R.57
more..
-
84
-
-
70450202132
-
The B73 maize genome: Complexity, diversity, and dynamics
-
The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, et al. Science 326 1112 1115
-
Science
, vol.326
, pp. 1112-1115
-
-
Schnable, P.S.1
Ware, D.2
Fulton, R.S.3
Stein, J.C.4
Wei, F.5
Pasternak, S.6
Liang, C.7
Zhang, J.8
Fulton, L.9
Graves, T.A.10
Minx, P.11
Reily, A.D.12
Courtney, L.13
Kruchowski, S.S.14
Tomlinson, C.15
Strong, C.16
Delehaunty, K.17
Fronick, C.18
Courtney, B.19
Rock, S.M.20
Belter, E.21
Du, F.22
Kim, K.23
Abbott, R.M.24
Cotton, M.25
Levy, A.26
Marchetto, P.27
Ochoa, K.28
Jackson, S.M.29
Gillam, B.30
more..
|