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Volumn 66, Issue 1, 2011, Pages 80-93

A global picture of tRNA genes in plant genomes

Author keywords

alga; angiosperm; genome evolution; non coding RNA; organelles; SINE

Indexed keywords

ANGIOSPERM; GENOME EVOLUTION; NON-CODING RNA; ORGANELLES; SINE;

EID: 79953234509     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2011.04490.x     Document Type: Article
Times cited : (76)

References (80)
  • 1
    • 0343554083 scopus 로고    scopus 로고
    • Characterization of nuclear tRNA(Tyr) introns: Their evolution from red algae to higher plants
    • DOI 10.1016/S0014-5793(97)01288-X, PII S001457939701288X
    • Akama, K., Nass, A., Junker, V., and, Beier, H., (1997) Characterization of nuclear tRNA(Tyr) introns: their evolution from red algae to higher plants. FEBS Lett. 417, 213-218. (Pubitemid 27491735)
    • (1997) FEBS Letters , vol.417 , Issue.2 , pp. 213-218
    • Akama, K.1    Nass, A.2    Junker, V.3    Beier, H.4
  • 2
    • 0034739469 scopus 로고    scopus 로고
    • Identification of two catalytic subunits of tRNA splicing endonuclease from Arabidopsis thaliana
    • Akama, K., Junker, V., and, Beier, H., (2000) Identification of two catalytic subunits of tRNA splicing endonuclease from Arabidopsis thaliana. Gene, 257, 177-185.
    • (2000) Gene , vol.257 , pp. 177-185
    • Akama, K.1    Junker, V.2    Beier, H.3
  • 3
    • 0029786082 scopus 로고    scopus 로고
    • Occurrence of nuclear encoded tRNA(Ile) in mitochondria of the liverwort Marchantia polymorpha
    • DOI 10.1007/s002940050118
    • Akashi, K., Sakurai, K., Hirayama, J., Fukuzawa, H., and, Ohyama, K., (1996) Occurrence of nuclear-encoded tRNAIle in the mitochondria of a liverwort, Marchantia polymorpha. Curr. Genet. 30, 181-185. (Pubitemid 26261683)
    • (1996) Current Genetics , vol.30 , Issue.2 , pp. 181-185
    • Akashi, K.1    Sakurai, K.2    Hirayama, J.3    Fukuzawa, H.4    Ohyama, K.5
  • 5
    • 0345552166 scopus 로고    scopus 로고
    • Differential import of nuclear-encoded tRNA(Gly) isoacceptors into Solanum tuberosum mitochondria
    • DOI 10.1093/nar/27.9.2037
    • Brubacher-Kauffmann, S., Maréchal-Drouard, L., Cosset, A., Dietrich, A., and, Duchêne, A.M., (1999) Differential import of nuclear-encoded tRNAGly isoacceptors into Solanum tuberosum mitochondria. Nucleic Acids Res. 27, 2037-2042. (Pubitemid 29209565)
    • (1999) Nucleic Acids Research , vol.27 , Issue.9 , pp. 2037-2042
    • Brubacher-Kauffmann, S.1    Marechal-Drouard, L.2    Cosset, A.3    Dietrich, A.4    Duchene, A.-M.5
  • 8
    • 58149189877 scopus 로고    scopus 로고
    • GtRNAdb: A database of transfer RNA genes detected in genomic sequence
    • Chan, P.P., and, Lowe, T.M., (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res. 37, D93-D97.
    • (2009) Nucleic Acids Res. , vol.37
    • Chan, P.P.1    Lowe, T.M.2
  • 9
    • 0031906750 scopus 로고    scopus 로고
    • Implication of 5'-flanking sequence elements in expression of a plant tRNA(Leu) gene
    • DOI 10.1023/A:1005988004924
    • Choisne, N., Carneiro, V.T., Pelletier, G., and, Small, I., (1998) Implication of 5′-flanking sequence elements in expression of a plant tRNA(Leu) gene. Plant Mol. Biol. 36, 113-123. (Pubitemid 28126477)
    • (1998) Plant Molecular Biology , vol.36 , Issue.1 , pp. 113-123
    • Choisne, N.1    Carneiro, V.T.C.2    Pelletier, G.3    Small, I.4
  • 10
    • 52049112605 scopus 로고    scopus 로고
    • On the evolution and expression of Chlamydomonas reinhardtii nucleus-encoded transfer RNA genes
    • Cognat, V., Deragon, J.M., Vinogradova, E., Salinas, T., Remacle, C., and, Maréchal-Drouard, L., (2008) On the evolution and expression of Chlamydomonas reinhardtii nucleus-encoded transfer RNA genes. Genetics, 179, 113-123.
    • (2008) Genetics , vol.179 , pp. 113-123
    • Cognat, V.1    Deragon, J.M.2    Vinogradova, E.3    Salinas, T.4    Remacle, C.5    Maréchal-Drouard, L.6
  • 11
    • 0034884908 scopus 로고    scopus 로고
    • Efficient elimination of selectable marker genes from the plastid genome by the CRE-lox site-specific recombination system
    • DOI 10.1046/j.1365-313X.2001.01068.x
    • Corneille, S., Lutz, K., Svab, Z., and, Maliga, P., (2001) Efficient elimination of selectable marker genes from the plastid genome by the CRE-lox site-specific recombination system. Plant J. 27, 171-178. (Pubitemid 32760419)
    • (2001) Plant Journal , vol.27 , Issue.2 , pp. 171-178
    • Corneille, S.1    Lutz, K.2    Svab, Z.3    Maliga, P.4
  • 12
    • 0013936167 scopus 로고
    • Codon-anticodon pairing: The wobble hypothesis
    • Crick, F.H.C., (1966) Codon-anticodon pairing: the wobble hypothesis. J. Mol. Biol. 19, 548-555.
    • (1966) J. Mol. Biol. , vol.19 , pp. 548-555
    • Crick, F.H.C.1
  • 13
    • 0038129639 scopus 로고    scopus 로고
    • Val import into mitochondria
    • DOI 10.1046/j.1365-313X.2003.01752.x
    • Delage, L., Duchêne, A.M., Zaepfel, M., and, Maréchal- Drouard, L., (2003) The anticodon and the D-domain sequences are essential determinants for plant cytosolic tRNA(Val) import into mitochondria. Plant J. 34, 623-633. (Pubitemid 36720197)
    • (2003) Plant Journal , vol.34 , Issue.5 , pp. 623-633
    • Delage, L.1    Duchene, A.-M.2    Zaepfel, M.3    Marechal-Drouard, L.4
  • 14
    • 33751048425 scopus 로고    scopus 로고
    • Short interspersed elements (SINEs) in plants: Origin, classification, and use as phylogenetic markers
    • Deragon, J.M., and, Zhang, X., (2006) Short interspersed elements (SINEs) in plants: origin, classification, and use as phylogenetic markers. Syst. Biol. 55, 949-956.
    • (2006) Syst. Biol. , vol.55 , pp. 949-956
    • Deragon, J.M.1    Zhang, X.2
  • 15
    • 33747371729 scopus 로고    scopus 로고
    • Distinct modes of TATA box utilization by the RNA polymerase III transcription machineries from budding yeast and higher plants
    • DOI 10.1016/j.gene.2006.03.013, PII S0378111906002472
    • Dieci, G., Yukawa, Y., Alzapiedi, M., Guffanti, E., Ferrari, R., Sugiura, M., and, Ottonello, S., (2006) Distinct modes of TATA box utilization by the RNA polymerase III transcription machineries from budding yeast and higher plants. Gene, 379, 12-25. (Pubitemid 44247323)
    • (2006) Gene , vol.379 , Issue.1-2 , pp. 12-25
    • Dieci, G.1    Yukawa, Y.2    Alzapiedi, M.3    Guffanti, E.4    Ferrari, R.5    Sugiura, M.6    Ottonello, S.7
  • 16
    • 36549073601 scopus 로고    scopus 로고
    • The expanding RNA polymerase III transcriptome
    • DOI 10.1016/j.tig.2007.09.001, PII S0168952507003071
    • Dieci, G., Fiorino, G., Castelnuovo, M., Teichmann, M., and, Pagano, A., (2007) The expanding RNA polymerase III transcriptome. Trends Genet. 23, 614-622. (Pubitemid 350180140)
    • (2007) Trends in Genetics , vol.23 , Issue.12 , pp. 614-622
    • Dieci, G.1    Fiorino, G.2    Castelnuovo, M.3    Teichmann, M.4    Pagano, A.5
  • 17
    • 0030295325 scopus 로고    scopus 로고
    • A single base change prevents import of cytosolic tRNA(Ala) into mitochondria in transgenic plants
    • Dietrich, A., Maréchal-Drouard, L., Carneiro, V., Cosset, A., and, Small, I., (1996) A single base change prevents import of cytosolic tRNA(Ala) into mitochondria in transgenic plants. Plant J. 10, 913-918.
    • (1996) Plant J. , vol.10 , pp. 913-918
    • Dietrich, A.1    Maréchal-Drouard, L.2    Carneiro, V.3    Cosset, A.4    Small, I.5
  • 18
    • 0034806951 scopus 로고    scopus 로고
    • The chloroplast-derived trnW and trnM-e genes are not expressed in Arabidopsis mitochondria
    • DOI 10.1006/bbrc.2001.5303
    • Duchêne, A.-M., and, Maréchal-Drouard, L., (2001) The chloroplast derived trnW and trnM-e genes are not expressed in Arabidopsis mitochondria. Biochem. Biophys. Res. Commun. 285, 1213-1216. (Pubitemid 32912910)
    • (2001) Biochemical and Biophysical Research Communications , vol.285 , Issue.5 , pp. 1213-1216
    • Duchene, A.-M.1    Marechal-Drouard, L.2
  • 19
    • 59749091105 scopus 로고    scopus 로고
    • Import of tRNAs and aminoacyl-tRNA synthetases into mitochondria
    • Duchêne, A.M., Pujol, C., and, Maréchal-Drouard, L., (2009) Import of tRNAs and aminoacyl-tRNA synthetases into mitochondria. Curr. Genet. 55, 1-18.
    • (2009) Curr. Genet. , vol.55 , pp. 1-18
    • Duchêne, A.M.1    Pujol, C.2    Maréchal-Drouard, L.3
  • 20
    • 0034237669 scopus 로고    scopus 로고
    • TRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes
    • DOI 10.1016/S0168-9525(00)02041-2, PII S0168952500020412
    • Duret, L., (2000) tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes. Trends Genet. 16, 287-289. (Pubitemid 30389593)
    • (2000) Trends in Genetics , vol.16 , Issue.7 , pp. 287-289
    • Duret, L.1
  • 22
    • 0032819746 scopus 로고    scopus 로고
    • Characterization of a plant mitochondrial active chromosome
    • DOI 10.1016/S0014-5793(99)01140-0, PII S0014579399011400
    • Fey, J., Vermel, M., Grienenberger, J., Maréchal-Drouard, L., and, Gualberto, J.M., (1999) Characterization of a plant mitochondrial active chromosome. FEBS Lett. 458, 124-128. (Pubitemid 29428167)
    • (1999) FEBS Letters , vol.458 , Issue.2 , pp. 124-128
    • Fey, J.1    Vermel, M.2    Grienenberger, J.-M.3    Marechal-Drouard, L.4    Gualberto, J.M.5
  • 23
    • 71549148346 scopus 로고    scopus 로고
    • TRNA as an active chemical scaffold for diverse chemical transformations
    • Francklyn, C.S., and, Minajigi, A., (2010) tRNA as an active chemical scaffold for diverse chemical transformations. FEBS Lett. 584, 366-375.
    • (2010) FEBS Lett. , vol.584 , pp. 366-375
    • Francklyn, C.S.1    Minajigi, A.2
  • 24
    • 0019883546 scopus 로고
    • Two conserved sequence blocks within eukaryotic tRNA genes are major promoter elements
    • Galli, G., Hofstetter, H., and, Birnstiel, M.L., (1981) Two conserved sequence blocks within eukaryotic tRNA genes are major promoter elements. Nature, 294, 626-631.
    • (1981) Nature , vol.294 , pp. 626-631
    • Galli, G.1    Hofstetter, H.2    Birnstiel, M.L.3
  • 25
    • 53549086938 scopus 로고    scopus 로고
    • Toward a more complete view of tRNA biology
    • Giege, R., (2008) Toward a more complete view of tRNA biology. Nat. Struct. Mol. Biol. 15, 1007-1014.
    • (2008) Nat. Struct. Mol. Biol. , vol.15 , pp. 1007-1014
    • Giege, R.1
  • 26
    • 3643114575 scopus 로고    scopus 로고
    • Universal rules and idiosyncratic features in tRNA identity
    • Giege, R., Sissler, M., and, Florentz, C., (1998) Universal rules and idiosyncratic features in tRNA identity. Nucleic Acids Res. 26, 5017-5035.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 5017-5035
    • Giege, R.1    Sissler, M.2    Florentz, C.3
  • 28
    • 0035808426 scopus 로고    scopus 로고
    • Identification and structural characterization of nucleus-encoded transfer RNAs imported into wheat mitochondria
    • DOI 10.1074/jbc.M007708200
    • Glover, K.E., Spencer, D.F., and, Gray, M.W., (2001) Identification and structural characterization of nucleus-encoded transfer RNAs imported into wheat mitochondria. J. Biol. Chem. 276, 639-648. (Pubitemid 32050360)
    • (2001) Journal of Biological Chemistry , vol.276 , Issue.1 , pp. 639-648
    • Glover, K.E.1    Spencer, D.F.2    Gray, M.W.3
  • 29
    • 33845635732 scopus 로고    scopus 로고
    • Diversity of tRNA genes in eukaryotes
    • DOI 10.1093/nar/gkl725
    • Goodenbour, J.M., and, Pan, T., (2006) Diversity of tRNA genes in eukaryotes. Nucleic Acids Res. 34, 6137-6146. (Pubitemid 44942735)
    • (2006) Nucleic Acids Research , vol.34 , Issue.21 , pp. 6137-6146
    • Goodenbour, J.M.1    Pan, T.2
  • 30
    • 0034813205 scopus 로고    scopus 로고
    • Widespread use of TATA elements in the core promoters for RNA polymerases III, II, and I in fission yeast
    • DOI 10.1128/MCB.21.20.6870-6881.2001
    • Hamada, M., Huang, Y., Lowe, T.M., and, Maraia, R.J., (2001) Widespread use of TATA elements in the core promoters for RNA polymerases III, II, and I in fission yeast. Mol. Cell. Biol. 21, 6870-6881. (Pubitemid 32911248)
    • (2001) Molecular and Cellular Biology , vol.21 , Issue.20 , pp. 6870-6881
    • Hamada, M.1    Huang, Y.2    Lowe, T.M.3    Maraia, R.J.4
  • 31
    • 0347519277 scopus 로고    scopus 로고
    • Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase, in Arabidopsis thaliana
    • DOI 10.1093/nar/gkg935
    • Hanaoka, M., Kanamaru, K., Takahashi, H., and, Tanaka, K., (2003) Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase, in Arabidopsis thaliana. Nucleic Acids Res. 31, 7090-7098. (Pubitemid 38008442)
    • (2003) Nucleic Acids Research , vol.31 , Issue.24 , pp. 7090-7098
    • Hanaoka, M.1    Kanamaru, K.2    Takahashi, H.3    Tanaka, K.4
  • 32
    • 0024674380 scopus 로고
    • The complete sequence of the rice (Oryza sativa) chloroplast genome: Intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals
    • Hiratsuka, J., Shimada, H., Whittier, R., et al. (1989) The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Mol. Gen. Genet. 217, 185-194.
    • (1989) Mol. Gen. Genet. , vol.217 , pp. 185-194
    • Hiratsuka, J.1    Shimada, H.2    Whittier, R.3
  • 33
    • 0019419104 scopus 로고
    • A split promoter for a eucaryotic tRNA gene
    • Hofstetter, H., Kressman, A., and, Birnstiel, M.L., (1981) A split promoter for a eucaryotic tRNA gene. Cell, 24, 573-585. (Pubitemid 11066837)
    • (1981) Cell , vol.24 , Issue.2 , pp. 573-585
    • Hofstetter, H.1    Kressmann, A.2    Birnstiel, M.L.3
  • 34
    • 33645233480 scopus 로고    scopus 로고
    • Relaxed transcription in Arabidopsis mitochondria is counterbalanced by RNA stability control mediated by polyadenylation and polynucleotide phosphorylase
    • Holec, S., Lange, H., Kuhn, K., Alioua, M., Borner, T., and, Gagliardi, D., (2006) Relaxed transcription in Arabidopsis mitochondria is counterbalanced by RNA stability control mediated by polyadenylation and polynucleotide phosphorylase. Mol. Cell. Biol. 26, 2869-2876.
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 2869-2876
    • Holec, S.1    Lange, H.2    Kuhn, K.3    Alioua, M.4    Borner, T.5    Gagliardi, D.6
  • 35
    • 43049169011 scopus 로고    scopus 로고
    • The remarkable chloroplast genome of dinoflagellates
    • DOI 10.1093/jxb/erm292
    • Howe, C.J., Nisbet, R.E., and, Barbrook, A.C., (2008) The remarkable chloroplast genome of dinoflagellates. J. Exp. Bot. 59, 1035-1045. (Pubitemid 351644643)
    • (2008) Journal of Experimental Botany , vol.59 , Issue.5 , pp. 1035-1045
    • Howe, C.J.1    Nisbet, R.E.R.2    Barbrook, A.C.3
  • 37
    • 28844473478 scopus 로고    scopus 로고
    • Short retroposons in eukaryotic genomes
    • DOI 10.1016/S0074-7696(05)47004-7, PII S0074769605470047
    • Kramerov, D.A., and, Vassetzky, N.S., (2005) Short retroposons in eukaryotic genomes. Int. Rev. Cytol. 247, 165-221. (Pubitemid 41774365)
    • (2005) International Review of Cytology , vol.247 , pp. 165-221
    • Kramerov, D.A.1    Vassetzky, N.S.2
  • 38
    • 0037415721 scopus 로고    scopus 로고
    • Plant dicistronic tRNA-snoRNA genes: A new mode of expression of the small nucleolar RNAs processed by RNase Z
    • DOI 10.1093/emboj/cdg040
    • Kruszka, K., Barneche, F., Guyot, R., Ailhas, J., Meneau, I., Schiffer, S., Marchfelder, A., and, Echeverria, M., (2003) Plant dicistronic tRNA-snoRNA genes: a new mode of expression of the small nucleolar RNAs processed by RNase Z. EMBO J. 22, 621-632. (Pubitemid 36193606)
    • (2003) EMBO Journal , vol.22 , Issue.3 , pp. 621-632
    • Kruszka, K.1    Barneche, F.2    Guyot, R.3    Ailhas, J.4    Meneau, I.5    Schiffer, S.6    Marchfelder, A.7    Echeverria, M.8
  • 39
    • 13744249250 scopus 로고    scopus 로고
    • Multiple promoters are a common feature of mitochondrial genes in Arabidopsis
    • DOI 10.1093/nar/gki179
    • Kühn, K., Weihe, A., and, Borner, T., (2005) Multiple promoters are a common feature of mitochondrial genes in Arabidopsis. Nucleic Acids Res. 33, 337-346. (Pubitemid 40276955)
    • (2005) Nucleic Acids Research , vol.33 , Issue.1 , pp. 337-346
    • Kuhn, K.1    Weihe, A.2    Borner, T.3
  • 40
    • 0343090419 scopus 로고    scopus 로고
    • Cotranscription of 5S rRNA-tRNA(Arg)(ACG) from Brassica napus chloroplasts and processing of their intergenic spacer
    • DOI 10.1016/S0378-1119(00)00234-1, PII S0378111900002341
    • Leal-Klevezas, D.S., Martinez-Soriano, J.P., and, Nazar, R.N., (2000) Cotranscription of 5S rRNA-tRNA(Arg)(ACG) from Brassica napus chloroplasts and processing of their intergenic spacer. Gene, 253, 303-311. (Pubitemid 30625221)
    • (2000) Gene , vol.253 , Issue.2 , pp. 303-311
    • Leal-Klevezas, D.S.1    Martinez-Soriano, J.P.2    Nazar, R.N.3
  • 41
    • 34548131227 scopus 로고    scopus 로고
    • Plastid tRNA Genes trnC-GCA and trnN-GUU are essential for plant cell development
    • DOI 10.1111/j.1365-313X.2007.03177.x
    • Legen, J., Wanner, G., Herrmann, R.G., Small, I., and, Schmitz-Linneweber, C., (2007) Plastid tRNA genes trnC-GCA and trnN-GUU are essential for plant cell development. Plant J. 51, 751-762. (Pubitemid 47301653)
    • (2007) Plant Journal , vol.51 , Issue.5 , pp. 751-762
    • Legen, J.1    Wanner, G.2    Herrmann, R.G.3    Small, I.4    Schmitz-Linneweber, C.5
  • 43
    • 0031665151 scopus 로고    scopus 로고
    • A subset of conserved tRNA genes in plastid DNA of nongreen plants
    • Lohan, A.J., and, Wolfe, K.H., (1998) A subset of conserved tRNA genes in plastid DNA of nongreen plants. Genetics, 150, 425-433. (Pubitemid 28415535)
    • (1998) Genetics , vol.150 , Issue.1 , pp. 425-433
    • Lohan, A.J.1    Wolfe, K.H.2
  • 44
    • 0030854739 scopus 로고    scopus 로고
    • TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • DOI 10.1093/nar/25.5.955
    • Lowe, T.M., and, Eddy, S.R., (1997) tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25, 955-964. (Pubitemid 27298263)
    • (1997) Nucleic Acids Research , vol.25 , Issue.5 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 47
    • 0036845754 scopus 로고    scopus 로고
    • The Chlamydomonas reinhardtii plastid chromosome: Islands of genes in a sea of repeats
    • DOI 10.1105/tpc.006155
    • Maul, J.E., Lilly, J.W., Cui, L., dePamphilis, C.W., Miller, W., Harris, E.H., and, Stern, D.B., (2002) The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a sea of repeats. Plant Cell, 14, 2659-2679. (Pubitemid 35326298)
    • (2002) Plant Cell , vol.14 , Issue.11 , pp. 2659-2679
    • Maul, J.E.1    Lilly, J.W.2    Cui, L.3    DePamphilis, C.W.4    Miller, W.5    Harris, E.H.6    Stern, D.B.7
  • 48
    • 70349921337 scopus 로고    scopus 로고
    • TRNA genes in eukaryotic genome organization and reorganization
    • McFarlane, R.J., and, Whitehall, S.K., (2009) tRNA genes in eukaryotic genome organization and reorganization. Cell Cycle, 8, 3102-3106.
    • (2009) Cell Cycle , vol.8 , pp. 3102-3106
    • McFarlane, R.J.1    Whitehall, S.K.2
  • 49
    • 35348896591 scopus 로고    scopus 로고
    • The Chlamydomonas genome reveals the evolution of key animal and plant functions
    • Merchant, S.S., Prochnik, S.E., Vallon, O., et al. (2007) The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science, 318, 245-250.
    • (2007) Science , vol.318 , pp. 245-250
    • Merchant, S.S.1    Prochnik, S.E.2    Vallon, O.3
  • 50
    • 0037099699 scopus 로고    scopus 로고
    • Selenoproteins and selenocysteine insertion system in the model plant cell system, Chlamydomonas reinhardtii
    • DOI 10.1093/emboj/cdf372
    • Novoselov, S.V., Rao, M., Onoshko, N.V., Zhi, H., Kryukov, G.V., Xiang, Y., Weeks, D.P., Hatfield, D.L., and, Gladyshev, V.N., (2002) Selenoproteins and selenocysteine insertion system in the model plant cell system, Chlamydomonas reinhardtii. EMBO J. 21, 3681-3693. (Pubitemid 34787042)
    • (2002) EMBO Journal , vol.21 , Issue.14 , pp. 3681-3693
    • Novoselov, S.V.1    Rao, M.2    Onoshko, N.V.3    Zhi, H.4    Kryukov, G.V.5    Xiang, Y.6    Weeks, D.P.7    Hatfield, D.L.8    Gladyshev, V.N.9
  • 51
    • 4444346889 scopus 로고    scopus 로고
    • Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana
    • DOI 10.1093/nar/gkh738
    • Pelissier, T., Bousquet-Antonelli, C., Lavie, L., and, Deragon, J.M., (2004) Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana. Nucleic Acids Res. 32, 3957-3966. (Pubitemid 39199087)
    • (2004) Nucleic Acids Research , vol.32 , Issue.13 , pp. 3957-3966
    • Pelissier, T.1    Bousquet-Antonelli, C.2    Lavie, L.3    Deragon, J.-M.4
  • 52
    • 0035282838 scopus 로고    scopus 로고
    • Restricted wobble rules for eukaryotic genomes [1]
    • PII S0168952500022083
    • Percudani, R., (2001) Restricted wobble rules for eukaryotic genomes. Trends Genet. 17, 133-135. (Pubitemid 32171946)
    • (2001) Trends in Genetics , vol.17 , Issue.3 , pp. 133-135
    • Percudani, R.1
  • 53
    • 0023664069 scopus 로고
    • Adjustment of the tRNA population to the codon usage in chloroplasts
    • Pfitzinger, H., Guillemaut, P., Weil, J.H., and, Pillay, D.T.N., (1987) Adjustment of the tRNA population to the codon usage in chloroplasts. Nucleic Acids Res. 15, 1377-1386.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 1377-1386
    • Pfitzinger, H.1    Guillemaut, P.2    Weil, J.H.3    Pillay, D.T.N.4
  • 55
    • 77956276464 scopus 로고    scopus 로고
    • TRNA biology charges to the front
    • Phizicky, E.M., and, Hopper, A.K., (2010) tRNA biology charges to the front. Genes Dev. 24, 1832-1860.
    • (2010) Genes Dev. , vol.24 , pp. 1832-1860
    • Phizicky, E.M.1    Hopper, A.K.2
  • 56
    • 0037245992 scopus 로고    scopus 로고
    • PLMltRNA, a database on the heterogeneous genetic origin of mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes
    • DOI 10.1093/nar/gkg080
    • Rainaldi, G., Volpicella, M., Licciulli, F., Liuni, S., Gallerani, R., and, Ceci, L.R., (2003) PLMItRNA, a database on the heterogeneous genetic origin of mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes. Nucleic Acids Res. 31, 436-438. (Pubitemid 36150422)
    • (2003) Nucleic Acids Research , vol.31 , Issue.1 , pp. 436-438
    • Rainaldi, G.1    Volpicella, M.2    Licciulli, F.3    Liuni, S.4    Gallerani, R.5    Ceci, L.R.6
  • 57
    • 77955955750 scopus 로고    scopus 로고
    • The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria
    • Ran, W., and, Higgs, P.G., (2010) The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria. Mol. Biol. Evol. 27, 2129-2140.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 2129-2140
    • Ran, W.1    Higgs, P.G.2
  • 59
    • 38849159102 scopus 로고    scopus 로고
    • Superwobbling facilitates translation with reduced tRNA sets
    • DOI 10.1038/nsmb.1370, PII NSMB1370
    • Rogalski, M., Karcher, D., and, Bock, R., (2008) Supperwobbling facilitates translation with reduced tRNA sets. Nat. Struct. Mol. Biol. 15, 192-198. (Pubitemid 351207507)
    • (2008) Nature Structural and Molecular Biology , vol.15 , Issue.2 , pp. 192-198
    • Rogalski, M.1    Karcher, D.2    Bock, R.3
  • 60
    • 24744459009 scopus 로고    scopus 로고
    • Gly import into tobacco mitochondria
    • DOI 10.1016/j.biochi.2005.04.004, PII S0300908405000994, Facets of the RNA World
    • Salinas, T., Schaeffer, C., Maréchal-Drouard, L., and, Duchêne, A.M., (2005) Sequence dependence of tRNA(Gly) import into tobacco mitochondria. Biochimie, 87, 863-872. (Pubitemid 41297812)
    • (2005) Biochimie , vol.87 , Issue.9-10 , pp. 863-872
    • Salinas, T.1    Schaeffer, C.2    Marechal-Drouard, L.3    Duchene, A.-M.4
  • 62
    • 0033615372 scopus 로고    scopus 로고
    • Complete structure of the chloroplast genome of Arabidopsis thaliana
    • Sato, S., Nakamura, Y., Kaneko, T., Asamizu, E., and, Tabata, S., (1999) Complete structure of the chloroplast genome of Arabidopsis thaliana. DNA Res. 6, 283-290. (Pubitemid 129705056)
    • (1999) DNA Research , vol.6 , Issue.5 , pp. 283-290
    • Sato, S.1    Nakamura, Y.2    Kaneko, T.3    Asamizu, E.4    Tabata, S.5
  • 63
    • 0034578344 scopus 로고    scopus 로고
    • Mitochondrial tRNA import: Are there distinct mechanisms?
    • Schneider, A., and, Maréchal-Drouard, L., (2000) Mitochondrial tRNA import: are there distinct mechanisms? Trends Cell Biol. 10, 509-513.
    • (2000) Trends Cell Biol. , vol.10 , pp. 509-513
    • Schneider, A.1    Maréchal-Drouard, L.2
  • 64
    • 0037108150 scopus 로고    scopus 로고
    • Recruitment of RNA polymerase III to its target promoters
    • Schramm, L., and, Hernandez, N., (2002) Recruitment of RNA polymerase III to its target promoters. Genes Dev. 16, 2593-2620.
    • (2002) Genes Dev. , vol.16 , pp. 2593-2620
    • Schramm, L.1    Hernandez, N.2
  • 65
    • 24644475674 scopus 로고    scopus 로고
    • Plastid RNA polymerases, promoters, and transcription regulators in higher plants
    • DOI 10.1016/S0074-7696(05)44001-2, PII S0074769605440012
    • Shiina, T., Tsunoyama, Y., Nakahira, Y., and, Khan, M.S., (2005) Plastid RNA polymerases, promoters, and transcription regulators in higher plants. Int. Rev. Cytol. 244, 1-68. (Pubitemid 41264847)
    • (2005) International Review of Cytology , vol.244 , Issue.SUPPL. , pp. 1-68
    • Shiina, T.1    Tsunoyama, Y.2    Nakahira, Y.3    Khan, M.S.4
  • 66
    • 0026165754 scopus 로고
    • Expression of nuclear tRNA(Tyr) genes from Arabidopsis thaliana in HeLa cell and wheat germ extracts
    • Stange, N., Beier, D., and, Beier, H., (1991) Expression of nuclear tRNA(Tyr) genes from Arabidopsis thaliana in HeLa cell and wheat germ extracts. Plant Mol. Biol. 16, 865-875.
    • (1991) Plant Mol. Biol. , vol.16 , pp. 865-875
    • Stange, N.1    Beier, D.2    Beier, H.3
  • 67
    • 0026457910 scopus 로고
    • Intron excision from transfer RNA precursors by plant splicing endonuclease requires unique features of the mature transfer RNA domain
    • Stange, N., Beier, D., and, Beier, H., (1992) Intron excision from transfer RNA precursors by plant splicing endonuclease requires unique features of the mature transfer RNA domain. Eur. J. Biochem. 210, 193-203.
    • (1992) Eur. J. Biochem. , vol.210 , pp. 193-203
    • Stange, N.1    Beier, D.2    Beier, H.3
  • 70
    • 33847650857 scopus 로고    scopus 로고
    • The discriminatory transfer routes of tRNA genes among organellar and nuclear genomes in flowering plants: A genome-wide investigation of indica rice
    • DOI 10.1007/s00239-005-0200-6
    • Tian, X., Zheng, J., Hu, S., and, Yu, J., (2007) The discriminatory transfer routes of tRNA genes among organellar and nuclear genomes in flowering plants: a genome-wide investigation of indica rice. J. Mol. Evol. 64, 299-307. (Pubitemid 46364870)
    • (2007) Journal of Molecular Evolution , vol.64 , Issue.3 , pp. 299-307
    • Tian, X.1    Zheng, J.2    Hu, S.3    Yu, J.4
  • 71
    • 0029392651 scopus 로고
    • Analysis of the role of 5' and 3' flanking sequence elements upon in vivo expression of the plant tRNATrp genes
    • DOI 10.1105/tpc.7.10.1723
    • Trp genes. Plant Cell, 7, 1723-1734. (Pubitemid 3003275)
    • (1995) Plant Cell , vol.7 , Issue.10 , pp. 1723-1734
    • Ulmasov, B.1    Folf, W.2
  • 72
    • 0032534049 scopus 로고    scopus 로고
    • Identity elements and aminoacylation of plant tRNA(Trp)
    • Ulmasov, B., Topin, A., Chen, Z., He, S.H., and, Folk, W.R., (1998) Identity elements and aminoacylation of plant tRNATrp. Nucleic Acids Res. 26, 5139-5141. (Pubitemid 28517570)
    • (1998) Nucleic Acids Research , vol.26 , Issue.22 , pp. 5139-5141
    • Ulmasov, B.1    Topin, A.2    Chen, Z.3    He, S.H.4    Folk, W.R.5
  • 73
    • 0025936548 scopus 로고
    • Diversification of the rice Waxy gene by insertion of mobile DNA elements into introns
    • Umeda, M., Ohtsubo, H., and, Ohtsubo, E., (1991) Diversification of the rice Waxy gene by insertion of mobile DNA elements into introns. Jpn. J. Genet. 66, 569-586.
    • (1991) Jpn. J. Genet. , vol.66 , pp. 569-586
    • Umeda, M.1    Ohtsubo, H.2    Ohtsubo, E.3
  • 74
    • 63249115977 scopus 로고    scopus 로고
    • Steady-state levels of imported tRNAs in Chlamydomonas mitochondria are correlated with both cytosolic and mitochondrial codon usages
    • Vinogradova, E., Salinas, T., Cognat, V., Remacle, C., and, Maréchal-Drouard, L., (2009) Steady-state levels of imported tRNAs in Chlamydomonas mitochondria are correlated with both cytosolic and mitochondrial codon usages. Nucleic Acids Res. 37, 1521-1528.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1521-1528
    • Vinogradova, E.1    Salinas, T.2    Cognat, V.3    Remacle, C.4    Maréchal-Drouard, L.5
  • 75
    • 0025182710 scopus 로고
    • A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon
    • Weber, F., Dietrich, A., Weil, J.H., and, Maréchal-Drouard, L., (1990) A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon. Nucleic Acids Res. 18, 5027-5030.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 5027-5030
    • Weber, F.1    Dietrich, A.2    Weil, J.H.3    Maréchal-Drouard, L.4
  • 76
    • 0026447426 scopus 로고
    • Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant
    • Wolfe, K.H., Morden, C.W., and, Palmer, J.D., (1992) Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant. Proc. Natl Acad. Sci. USA, 89, 10648-10652.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 10648-10652
    • Wolfe, K.H.1    Morden, C.W.2    Palmer, J.D.3
  • 78
    • 34248346631 scopus 로고    scopus 로고
    • Altered expression of plant lysyl tRNA synthetase promotes tRNA misacylation and translational recoding of lysine
    • DOI 10.1111/j.1365-313X.2007.03076.x
    • Wu, X.R., Kenzior, A., Willmot, D., Scanlon, S., Chen, Z., Topin, A., He, S., Acevedo, A., and, Folk, W.R., (2007) Altered expression of plant lysyl tRNA synthetase promotes tRNA misacylation and translational recoding of lysine. Plant J. 50, 627-636. (Pubitemid 46733754)
    • (2007) Plant Journal , vol.50 , Issue.4 , pp. 627-636
    • Wu, X.R.1    Kenzior, A.2    Willmot, D.3    Scanlon, S.4    Chen, Z.5    Topin, A.6    He, S.H.7    Acevedo, A.8    Folk, W.R.9
  • 79
    • 0034086571 scopus 로고    scopus 로고
    • The TATA motif, the CAA motif and the poly(T) transcription termination motif are all important for transcription re-initiation on plant tRNA genes
    • DOI 10.1046/j.1365-313X.2000.00752.x
    • Yukawa, Y., Sugita, M., Choisne, N., Small, I., and, Sugiura, M., (2000) The TATA motif, the CAA motif and the poly(T) transcription termination motif are all important for transcription re-initiation on plant tRNA genes. Plant J. 22, 439-447. (Pubitemid 30400012)
    • (2000) Plant Journal , vol.22 , Issue.5 , pp. 439-447
    • Yukawa, Y.1    Sugita, M.2    Choisne, N.3    Small, I.4    Sugiura, M.5
  • 80
    • 33947602584 scopus 로고    scopus 로고
    • A survey of expressed tRNA genes in the chromosome I of Arabidopsis using an RNA polymerase III-dependent in vitro transcription system
    • DOI 10.1016/j.gene.2006.10.011, PII S0378111906006597
    • Yukawa, Y., Mizutani, T., Akama, K., and, Sugiura, M., (2007) A survey of expressed tRNA genes in the chromosome I of Arabidopsis using an RNA polymerase III-dependent in vitro transcription system. Gene, 392, 7-13. (Pubitemid 46482831)
    • (2007) Gene , vol.392 , Issue.1-2 , pp. 7-13
    • Yukawa, Y.1    Mizutani, T.2    Akama, K.3    Sugiura, M.4


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