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Volumn 55, Issue 6, 2011, Pages 612-619

Detection of Saccharopolyspora rectivirgula by quantitative real-time PCR

Author keywords

16S rRNA gene; bioaerosols; microbial exposure; real time PCR; Saccharopolyspora rectivirgula

Indexed keywords

16S RRNA GENE; BIOAEROSOLS; MICROBIAL EXPOSURE; REAL-TIME PCR; SACCHAROPOLYSPORA RECTIVIRGULA;

EID: 79960347258     PISSN: 00034878     EISSN: 14753162     Source Type: Journal    
DOI: 10.1093/annhyg/mer018     Document Type: Article
Times cited : (20)

References (41)
  • 1
    • 1942443733 scopus 로고    scopus 로고
    • Divergence and Redundancy of 16S rRNA Sequences in Genomes with Multiple rrn Operons
    • DOI 10.1128/JB.186.9.2629-2635.2004
    • Acinas SG, Marcelino LA, Klepac-Ceraj V, Polz MF. (2004) Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons. Int J Syst Bacteriol; 186: 2629-35. (Pubitemid 38525916)
    • (2004) Journal of Bacteriology , vol.186 , Issue.9 , pp. 2629-2635
    • Acinas, S.G.1    Marcelino, L.A.2    Klepac-Ceraj, V.3    Polz, M.F.4
  • 2
    • 29144445330 scopus 로고    scopus 로고
    • PCR-induced sequence artifacts and bias: Insights from comparison of two 16s rRNA clone libraries constructed from the same sample
    • DOI 10.1128/AEM.71.12.8966-8969.2005
    • Acinas SG, Sarma-Rupavtarm R, Klepac-Ceraj V, Polz MF. (2005) PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample. Appl Environ Microbiol; 71: 8966-9. (Pubitemid 41804041)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.12 , pp. 8966-8969
    • Acinas, S.G.1    Sarma-Rupavtarm, R.2    Klepac-Ceraj, V.3    Polz, M.F.4
  • 3
    • 33749575824 scopus 로고    scopus 로고
    • Mogliche uberschatzung des actinomycetengehaltes durch wachstum thermophiler Bacillus- und Geobacillus-spezies auf selektivna hrboden fur thermophile actinomyceten
    • Albrecht A, Kämpfer P. (2006) Potential overestimation of the actinomycetes concentration by growth of thermophilic species of Bacillus and Geobacillus on selective media for thermophilic actinomycetes. Gef Reinhalt Luft; 9: 365-7. (Pubitemid 44532739)
    • (2006) Gefahrstoffe Reinhaltung der Luft , vol.66 , Issue.9 , pp. 365-367
    • Albrecht, A.1    Kampfer, P.2
  • 4
    • 0036682224 scopus 로고    scopus 로고
    • PRIMROSE: A computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database
    • Ashelford KE, Weightman AJ, Fry JC. (2002) PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database. Nucleic Acids Res; 30: 3481-9. (Pubitemid 34845945)
    • (2002) Nucleic Acids Research , vol.30 , Issue.15 , pp. 3481-3489
    • Ashelford, K.E.1    Weightman, A.J.2    Fry, J.C.3
  • 6
    • 0032432372 scopus 로고    scopus 로고
    • Redefining relativity: Quantitative PCR at low template concentrations for industrial and environmental microbiology
    • DOI 10.1038/sj.jim.2900546
    • Chandler DP. (1998) Redefining relativity: quantitative PCR at low template concentrations for industrial and environmental microbiology. J Ind Microbiol Biotech; 21: 128-40. (Pubitemid 29027351)
    • (1998) Journal of Industrial Microbiology and Biotechnology , vol.21 , Issue.3 , pp. 128-140
    • Chandler, D.P.1
  • 7
    • 0010440083 scopus 로고
    • Thermophilic and mesophilic actinomycetes in mouldy hay
    • Corbaz R, Gregory PH, Lacey ME. (1963) Thermophilic and mesophilic actinomycetes in mouldy hay. J Gen Microbiol; 32: 449-55.
    • (1963) J. Gen. Microbiol. , vol.32 , pp. 449-455
    • Corbaz, R.1    Gregory, P.H.2    Lacey, M.E.3
  • 8
    • 0021922651 scopus 로고
    • Factors influencing the development of serum precipitins to farmer's lung antigen in Quebec dairy farmers
    • Cornier Y, Belanger J, Durand P. (1985) Factors influencing the development of serum precipitins to farmer's lung antigen in Quebec dairy farmers. Thorax; 40: 138-42. (Pubitemid 15114121)
    • (1985) Thorax , vol.40 , Issue.2 , pp. 138-142
    • Cormier, Y.1    Belanger, J.2    Durand, P.3
  • 9
    • 0014265783 scopus 로고
    • The thermophilic actinomycetes in mouldy hay: Micropolyspora faeni spnov
    • Cross T, Maciver M, Lacey J. (1968) The thermophilic actinomycetes in mouldy hay: Micropolyspora faeni spnov. J Gen Microbiol; 50: 351-9.
    • (1968) J. Gen. Microbiol. , vol.50 , pp. 351-359
    • Cross, T.1    Maciver, M.2    Lacey, J.3
  • 10
    • 84888470555 scopus 로고    scopus 로고
    • Mikroorganismen in der arbeitsplatzatmosphäre-aktinomyceten
    • editors KANBericht 13 2nd edn. St. Augustin FV
    • Danneberg G, Driesel A. (1999) Mikroorganismen in der Arbeitsplatzatmosphäre-Aktinomyceten. editors, KANBericht 13, 2nd edn. St. Augustin, FV: Verein zur Förderung der Arbeitssicherheit in Europa e.V.
    • (1999) Verein zur Förderung der Arbeitssicherheit in Europae.V
    • Danneberg, G.1    Driesel, A.2
  • 11
    • 0032803396 scopus 로고    scopus 로고
    • Saccharopolyspora rectivirgula from Quebec dairy barns: Application of simplified criteria for the identification of an agent responsible for farmer's lung disease
    • Duchaine C, Meriaux A, Brochu G et al. (1999) Saccharopolyspora rectivirgula from Quebec dairy barns: application of simplified criteria for the identification of an agent responsible for farmer's lung disease. J Med Microbiol; 48: 173-80. (Pubitemid 29371602)
    • (1999) Journal of Medical Microbiology , vol.48 , Issue.2 , pp. 173-180
    • Duchaine, C.1    Meriaux, A.2    Brochu, G.3    Bernard, K.4    Cormier, Y.5
  • 12
    • 0036366121 scopus 로고    scopus 로고
    • Effect of sampling time on the culturability of airborne fungi and bacteria sampled by filtration
    • DOI 10.1093/annhyg/mef007
    • Durand KTH, Muilenberg ML, Burge HA, Seixas NS. (2002) Effect of sampling time on the culturability of airborne fungi and bacteria sampled by filtration Ann. Occup. Hyg. 46: 113-8. (Pubitemid 36553800)
    • (2002) Annals of Occupational Hygiene , vol.46 , Issue.1 , pp. 113-118
    • Durand, K.T.H.1    Muilenberg, M.L.2    Burge, H.A.3    Seixas, N.S.4
  • 13
    • 35148846318 scopus 로고    scopus 로고
    • Aerosolization of mycobacteria and legionellae during dental treatment: Low exposure despite dental unit contamination
    • DOI 10.1111/j.1462-2920.2007.01395.x
    • Dutil S, Veillette M, Mériaux A et al. (2007) Aerosolization of mycobacteria and legionellae during dental treatment: low exposure despite dental unit contamination. Environ Microbiol; 9: 2836-43. (Pubitemid 47547551)
    • (2007) Environmental Microbiology , vol.9 , Issue.11 , pp. 2836-2843
    • Dutil, S.1    Veillette, M.2    Meriaux, A.3    Lazure, L.4    Barbeau, J.5    Duchaine, C.6
  • 14
    • 42449095289 scopus 로고    scopus 로고
    • Enumeration of Archaea and Bacteria in seafloor basalt using real-time quantitative PCR and fluorescence microscopy
    • DOI 10.1111/j.1574-6968.2008.01119.x
    • Einen J, Thorseth IH, Ovreas L. (2008) Enumeration of Archaea and Bacteria in seafloor basalt using real-time quantitative PCR and fluorescence microscopy. FEMS Microbiol Lett; 282: 182-7. (Pubitemid 351569454)
    • (2008) FEMS Microbiology Letters , vol.282 , Issue.2 , pp. 182-187
    • Einen, J.1    Thorseth, I.H.2    Ovreas, L.3
  • 15
    • 72649101993 scopus 로고    scopus 로고
    • Direct detection of salmonella cells in the air of livestock stables by real-time PCR
    • Fallschissel K, Jäckel U, Kämpfer P. (2009) Direct detection of salmonella cells in the air of livestock stables by real-time PCR Ann. Occup. Hyg. 53: 859-68.
    • (2009) Ann. Occup. Hyg. , vol.53 , pp. 859-868
    • Fallschissel, K.1    Jäckel, U.2    Kämpfer, P.3
  • 17
    • 0024448961 scopus 로고
    • Transfer of faenia rectivirgula kurup and agre 1983 to the genus saccharopolyspora lacey and goodfellow 1975 elevation of saccharopolyspora hirsuta subsp. Taberi Labeda 1987 to Species Level and Emended Description of the Genus Saccharopolyspora
    • Korn-Wendisch F, Kempf A, Grund E et al. (1989) Transfer of Faenia rectivirgula Kurup and Agre 1983 to the Genus Saccharopolyspora Lacey and Goodfellow 1975, Elevation of Saccharopolyspora hirsuta subsp. Taberi Labeda 1987 to Species Level, and Emended Description of the Genus Saccharopolyspora. Int J Syst Bacteriol; 39: 430-41.
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 430-441
    • Korn-Wendisch, F.1    Kempf, A.2    Grund, E.3
  • 19
    • 0013645948 scopus 로고
    • Transfer of micropolyspora rectivirgula krassilnikov and Agre 1964 lechevalier lechevalier and becker 1966 to faenia gen nov
    • Kurup VP, Agre NS. (1983) Transfer of Micropolyspora rectivirgula (Krassilnikov and Agre 1964) Lechevalier, Lechevalier, and Becker 1966 to Faenia gen. nov. Int J Syst Bacteriol; 33: 663-5.
    • (1983) Int. J. Syst. Bacteriol. , vol.33 , pp. 663-665
    • Kurup, V.P.1    Agre, N.S.2
  • 20
    • 0343113872 scopus 로고    scopus 로고
    • Darmstädter Seminar: Abfalltechnik Hygiene in der Abfallwirtschaft editor. Verein zur Förderung des InstitutsWAR. TU Darmstadt Germany: Institut für Wasserversorgung und Grundwasserschutz, Abwassertechnik Abfalltechnik Industrielle Stoffkreisläufe Raum und Infrastrukturplanung -TU Darmstadt
    • Kutzner HJ, Kempf A. (1996) Vorkommen von Actinomyceten in der Luft von Abfallbehandlungsanlagen, series WAR 92, 50. Darmstädter Seminar: Abfalltechnik, Hygiene in der Abfallwirtschaft, editor. Verein zur Förderung des InstitutsWAR. TU Darmstadt, Germany: Institut für Wasserversorgung und Grundwasserschutz, Abwassertechnik, Abfalltechnik, Industrielle Stoffkreisläufe Raum und Infrastrukturplanung -TU Darmstadt. pp. 13-54.
    • (1996) Vorkommen von Actinomyceten in der Luft von Abfallbehandlungsanlagen Series War , vol.92 , Issue.50 , pp. 13-54
    • Kutzner, H.J.1    Kempf, A.2
  • 21
    • 0025065244 scopus 로고
    • Taxonomic history of actinomycete strains bearing the epithet rectivirgula: Correct citation of authorities
    • Lacey J. (1990) Taxonomic history of actinomycete strains bearing the epithet rectivirgula: correct citation of authorities. Int J Syst Bacteriol; 40: 467-8. (Pubitemid 20378414)
    • (1990) International Journal of Systematic Bacteriology , vol.40 , Issue.4 , pp. 467-468
    • Lacey, J.1
  • 22
    • 0024210822 scopus 로고
    • Fungal and actinomycete spores as pollutants of the workplace and occupational allergens
    • Lacey J, Crook B. (1988) Fungal and actinomycete spores as pollutants of the workplace and occupational allergens Ann. Occup. Hyg. 32: 515-33. (Pubitemid 19020615)
    • (1988) Annals of Occupational Hygiene , vol.32 , Issue.4 , pp. 515-533
    • Lacey, J.1    Crook, B.2
  • 23
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In Stackebrandt E Goodfellow M editors New York NY: John Wiley & Sons Inc.
    • Lane DJ. (1991) 16S/23S rRNA sequencing. In Stackebrandt E, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics. New York, NY: John Wiley & Sons, Inc; pp. 115-48.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-148
    • Lane, D.J.1
  • 25
    • 0037400969 scopus 로고    scopus 로고
    • Application of the real-time PCR for the detection of airborne microbial pathogens in reference to the anthrax spores
    • DOI 10.1016/S0167-7012(03)00019-8
    • Makino S, Cheun HI. (2003) Application of the real-time PCR or the detection of airborne microbial pathogens in reference to the anthrax spores. J Microbiol Methods; 53: 141-7. (Pubitemid 36332348)
    • (2003) Journal of Microbiological Methods , vol.53 , Issue.2 , pp. 141-147
    • Makino, S.-I.1    Cheun, H.-I.2
  • 29
    • 77749297966 scopus 로고    scopus 로고
    • Quantification and identification of culturable airborne bacteria from duck houses
    • Martin E, Kämpfer P, Jäckel U. (2009) Quantification and identification of culturable airborne bacteria from duck houses Ann. Occup. Hyg. 54: 217-27.
    • (2009) Ann. Occup. Hyg. , vol.54 , pp. 217-227
    • Martin, E.1    Kämpfer, P.2    Jäckel, U.3
  • 30
    • 1842509857 scopus 로고    scopus 로고
    • Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR
    • DOI 10.1016/j.mimet.2004.01.013, PII S016770120400034X
    • Mumy KL, Findlay RH. (2004) Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR. J Microbiol Methods; 57: 259-68. (Pubitemid 38446871)
    • (2004) Journal of Microbiological Methods , vol.57 , Issue.2 , pp. 259-268
    • Mumy, K.L.1    Findlay, R.H.2
  • 31
    • 15944387317 scopus 로고    scopus 로고
    • The viable but nonculturable state in bacteria
    • Review on Microbial Pathogenesis
    • Oliver JD. (2005) The viable but nonculturable state in bacteria. J Microbiol; 43: 93-100. (Pubitemid 40431505)
    • (2005) Journal of Microbiology , vol.43 , pp. 93-100
    • Oliver, J.D.1
  • 32
    • 47249125689 scopus 로고    scopus 로고
    • Exposure to bioaerosols in poultry houses at different stages of fattening; use of real-time PCR for airborne bacterial quantification
    • DOI 10.1093/annhyg/men021
    • Oppliger A, Charrie N, Droz PO et al. (2008) Exposure to bioaerosols in poultry houses at different stages of fattening; use of real-time PCR for airborne bacterial quantification Ann. Occup. Hyg. 52: 405-12. (Pubitemid 351989649)
    • (2008) Annals of Occupational Hygiene , vol.52 , Issue.5 , pp. 405-412
    • Oppliger, A.1    Charriere, N.2    Droz, P.-O.3    Rinsoz, T.4
  • 33
    • 49749205407 scopus 로고
    • Farmers lung thermophilic actinomycetes as a source of farmers lung hay antigens
    • Pepys J, Jenkins P, Festensteign AN et al. (1963) Farmer's Lung. Thermophilic actinomycetes as a source of farmer's lung hay' antigens. Lancet; 2: 607-11.
    • (1963) Lancet , vol.2 , pp. 607-611
    • Pepys, J.1    Jenkins, P.2    Festensteign, A.N.3
  • 34
    • 44449144647 scopus 로고    scopus 로고
    • Saccharopolyspora cebuensis sp nov a novel actinomycete isolated from a philippine sponge porifera
    • Pimentel-Elardo SM, Tiro LP, Grozdanov L et al. (2008) Saccharopolyspora cebuensis sp. nov., a novel actinomycete isolated from a Philippine sponge (Porifera). Int J Syst Evol Microbiol; 58: 628-32.
    • (2008) Int. J. Syst. Evol. Microbiol. , vol.58 , pp. 628-632
    • Pimentel-Elardo, S.M.1    Tiro, L.P.2    Grozdanov, L.3
  • 35
    • 0031711754 scopus 로고    scopus 로고
    • Bias in template-to-product ratios in multitemplate PCR
    • Polz MF, Cavanaugh CM. (1998) Bias in template-to-product ratios in multitemplate PCR. Appl Environ Microbiol; 64: 3724-30. (Pubitemid 28462964)
    • (1998) Applied and Environmental Microbiology , vol.64 , Issue.10 , pp. 3724-3730
    • Polz, M.F.1    Cavanaugh, C.M.2
  • 36
    • 0027948550 scopus 로고
    • Desiccation tolerance of prokaryotes
    • Potts M. (1994) Desiccation tolerance of prokaryotes. Microbiol Rev; 58: 755-805.
    • (1994) Microbiol. Rev. , vol.58 , pp. 755-805
    • Potts, M.1
  • 37
    • 0032861449 scopus 로고    scopus 로고
    • The influence of hay-packing techniques on the presence of Saccharopolyspora rectivirgula
    • DOI 10.1046/j.1365-2672.1999.00826.x
    • Ranalli G, Grazia L, Roggeri A. (1999) The influence of haypacking techniques on the presence of Saccharopolyspora rectivirgula. J Appl Microbiol; 87: 359-65. (Pubitemid 29479824)
    • (1999) Journal of Applied Microbiology , vol.87 , Issue.3 , pp. 359-365
    • Ranalli, G.1    Grazia, L.2    Roggeri, A.3
  • 38
    • 77954385610 scopus 로고    scopus 로고
    • Analysis of Actinobacteria from mould-colonized water damaged building material
    • Schäfer J, Jäckel U, Kämpfer P. (2010) Analysis of Actinobacteria from mould-colonized water damaged building material. Syst Appl Microbiol; 33: 260-8.
    • (2010) Syst. Appl. Microbiol. , vol.33 , pp. 260-268
    • Schäfer, J.1    Jäckel, U.2    Kämpfer, P.3
  • 39
    • 0021779934 scopus 로고
    • Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats
    • Staley JT, Konopka A. (1985) Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. Annu Rev Microbiol; 39: 321-46.
    • (1985) Annu. Rev. Microbiol. , vol.39 , pp. 321-346
    • Staley, J.T.1    Konopka, A.2
  • 41
    • 0000847922 scopus 로고    scopus 로고
    • Microbial ecology-new directions new importance
    • In Boone DR Castenholz RW and Garrity GM editors 2nd edn. New York NY: Springer Verlag;
    • Zinder SH, Salyers AA. (2001) Microbial ecology-new directions, new importance. In Boone DR, Castenholz RW and Garrity GM, editors. Bergey's manual of systematic bacteriology. 2nd edn. New York, NY: Springer Verlag; pp. 101-9.
    • (2001) Bergeys Manual of Systematic Bacteriology , pp. 101-109
    • Zinder, S.H.1    Salyers, A.A.2


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