Peptidomic analysis of skin secretions demonstrates that the allopatric populations of Xenopus muelleri (Pipidae) are not conspecific

Peptides

Volumn 32, Issue 7, 2011, Pages 1502-1508

  Mechkarska, Milena ^a   Ahmed, Eman ^a   Coquet, Laurent ^b   Leprince, Jérôme ^b   Jouenne, Thierry ^b   Vaudry, Hubert ^b   King, Jay D ^c   Conlon, J Michael ^a  

^a UNITED ARAB EMIRATES UNIVERSITY   (United Arab Emirates)

^b UNIVERSITÉ DE ROUEN   (France)

^c Rare Species Conservatory Foundation   (United States)

Author keywords

Antimicrobial; Frog skin; Magainin; PGLa; Polyploidy; Procaerulein; Proxenopsin; Tigerinin

Indexed keywords

AMIDE; CERULEINE PRECURSOR FRAGMENT; CERULETIDE; CYCLOPEPTIDE; GLYCYLLEUCINE; MAGAININ 1; MAGAININ 2; NORADRENALIN; PEPTIDE GLYCINE LEUCINE AMIDE; POLYPEPTIDE ANTIBIOTIC AGENT; UNCLASSIFIED DRUG; XENOPSIN; XENOPSIN PRECURSOR FRAGMENT;

ALLOPATRY; ALPHA HELIX; ANIMAL EXPERIMENT; ANTIMICROBIAL ACTIVITY; ARTICLE; FEMALE; HEMOLYSIS; HUMAN; HUMAN CELL; HYDROPHOBICITY; MALE; MINIMUM INHIBITORY CONCENTRATION; NONHUMAN; PEPTIDOMICS; PHYLOGENY; POPULATION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE; SKIN SECRETION; XENOPUS; XENOPUS MUELLERI;

AFRICA, EASTERN; AFRICA, WESTERN; AMINO ACID SEQUENCE; AMPHIBIAN PROTEINS; ANIMALS; ANTIMICROBIAL CATIONIC PEPTIDES; BODILY SECRETIONS; CANDIDA ALBICANS; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; ERYTHROCYTES; ESCHERICHIA COLI; FEMALE; GENETIC SPECIATION; HEMOLYSIS; HUMANS; MALE; MICROBIAL SENSITIVITY TESTS; MOLECULAR SEQUENCE DATA; PHYLOGENY; PHYLOGEOGRAPHY; PROTEOMICS; SKIN; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; STAPHYLOCOCCUS AUREUS; XENOPUS;

ANURA; PIPIDAE; XENOPUS (GENUS); XENOPUS BOREALIS; XENOPUS MUELLERI;

EID: 79960291825     PISSN: 01969781     EISSN: 18735169     Source Type: Journal    
DOI: 10.1016/j.peptides.2011.05.025     Document Type: Article

References (39)

1. Clinical Laboratory and Standards Institute Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically. Approved Standard M07-A8 2008 CLSI Wayne, PA
2. Clinical Laboratory and Standards Institute Reference method for broth dilution antifungal susceptibility testing of yeast. Approved Standard M27-A3 2008 CLSI Wayne, PA
3. J.M. Conlon The contribution of skin antimicrobial peptides to the system of innate immunity in anurans Cell Tissue Res 343 2010 201 212
4. J.M. Conlon, N. Al-Ghaferi, B. Abraham, and J. Leprince Strategies for transformation of naturally-occurring amphibian antimicrobial peptides into therapeutically valuable anti-infective agents Methods 42 2007 349 357 (Pubitemid 46856863)
5. J.M. Conlon, N. Al-Ghaferi, E. Ahmed, M.A. Meetani, J. Leprince, and P.F. Nielsen Orthologs of magainin, PGLa, procaerulein-derived, and proxenopsin-derived peptides from skin secretions of the octoploid frog Xenopus amieti (Pipidae) Peptides 31 2010 989 994
6. J.M. Conlon, L. Coquet, T. Jouenne, J. Leprince, H. Vaudry, and S. Iwamuro Evidence from the primary structures of dermal antimicrobial peptides that Rana tagoi okiensis and Rana tagoi tagoi (Ranidae) are not conspecific subspecies Toxicon 55 2010 430 435
7. J.M. Conlon, L. Coquet, J. Leprince, T. Jouenne, H. Vaudry, and J.D. King Primary structures of skin antimicrobial peptides indicate a close, but not conspecific, phylogenetic relationship between the leopard frogs Lithobates onca and Lithobates yavapaiensis (Ranidae) Comp Biochem Physiol C: Toxicol Pharmacol 151 2010 313 317
8. J.M. Conlon, M. Mechkarska, E. Ahmed, J. Leprince, H. Vaudry, and J.D. King Purification and properties of antimicrobial peptides from skin secretions of the Eritrea clawed frog Xenopus clivii (Pipidae) Comp Biochem Physiol C: Toxicol Pharmacol 153 2011 350 354
9. J.M. Conlon, M. Mechkarska, L. Coquet, T. Jouenne, J. Leprince, and H. Vaudry Characterization of antimicrobial peptides in skin secretions from discrete populations of Lithobates chiricahuensis (Ranidae) from central and southern Arizona Peptides 32 2011 664 669
10. M. Dathe, T. Wieprecht, H. Nikolenko, L. Handel, W.L. Maloy, and D.L. MacDonald Hydrophobicity, hydrophobic moment and angle subtended by charged residues modulate antibacterial and haemolytic activity of amphipathic helical peptides FEBS Lett 403 1997 208 212 (Pubitemid 27081496)
11. K. de Queiroz The general lineage concept of species, species criteria, and the process of speciation D. Howard, S. Berlocher, Endless forms: species and speciation 1998 Oxford Press New York 57 75
12. B.J. Evans Ancestry influences the fate of duplicated genes millions of years after polyploidization of clawed frogs (Xenopus) Genetics 176 2007 1119 1130 (Pubitemid 46961109)
13. B.J. Evans Genome evolution and speciation genetics of clawed frogs (Xenopus and Silurana) Front Biosci 13 2008 4687 4706 (Pubitemid 351589192)
14. B.J. Evans, D.B. Kelley, R.C. Tinsley, D.J. Melnick, and D.C. Cannatella A mitochondrial DNA phylogeny of African clawed frogs: phylogeography and implications for polyploid evolution Mol Phylogenet Evol 33 2004 197 213 (Pubitemid 39138745)
15. W.J. Fischer, W.A. Koch, and A. Elepfandt Sympatry and hybridization between the clawed frogs Xenopus laevis laevis and Xenopus muelleri (Pipidae) J Zool 252 2000 99 107
16. Frost DR. Amphibian species of the world: an online reference. Version 5.5. American Museum of Natural History, New York, USA, Electronic database accessible at http://research.amnh.org/herpetology/amphibia/index.php; 2011.
17. B.W. Gibson, L. Poulter, D.H. Williams, and J.E. Maggio Novel peptide fragments originating from PGLa and the caerulein and xenopsin precursors from Xenopus laevis J Biol Chem 261 1986 5341 5349 (Pubitemid 17204342)
18. E.B. Harper, G.J. Measey, D.A. Patrick, M. Menegon, and J.R. Vonesh Field guide to amphibians of the eastern arc mountains and coastal forests of Tanzania and Kenya 2010 Camerapix Publishers International Nairobi, Kenya
19. R.J. Jackway, T.L. Pukala, S.C. Donnellan, P.J. Sherman, M.J. Tyler, and J.H. Bowie Skin peptide and cDNA profiling of Australian anurans: genus and species identification and evolutionary trends Peptides 32 2011 161 172
20. H.I. Jung, S.I. Kim, K.S. Ha, C.O. Joe, and K.W. Kang Isolation and characterization of guamerin, a new human leukocyte elastase inhibitor from Hirudo nipponia J Biol Chem 270 1995 13879 13884
21. H.R. Kobel Allopolyploid speciation R.C. Tinsley, H.R. Kobel, The biology of Xenopus 1996 Clarendon Press Oxford 391 401
22. H.R. Kobel, C. Loumont, and R.C. Tinsley The extant species R.C. Tinsley, H.R. Kobel, The biology of Xenopus 1996 Clarendon Press Oxford 9 33
23. J. Kyte, and D.F. Doolittle A simple method for displaying the hydropathic character of a protein J Mol Biol 157 1982 105 132
24. C. Largman Isolation and characterization of rat pancreatic elastase Biochemistry 22 1983 3763 3770 (Pubitemid 13035551)
25. J.H. Malone, T.H. Chrzanowski, and P. Michalak Sterility and gene expression in hybrid males of Xenopus laevis and X. muelleri PLoS One 2 2007 e781
26. Measey J, Tinsley R, Minter L, Rödel M-O. Xenopus muelleri. In: IUCN 2010. IUCN red list of threatened species. Version 2010.4. Electronic database accessible at www.iucnredlist.org; 2004.
27. M. Mechkarska, E. Ahmed, L. Coquet, J. Leprince, T. Jouenne, and H. Vaudry Antimicrobial peptides with therapeutic potential from skin secretions of the Marsabit clawed frog Xenopus borealis (Pipidae) Comp Biochem Physiol C: Toxicol Pharmacol 152 2010 467 472
28. M. Mechkarska, E. Ahmed, L. Coquet, J. Leprince, T. Jouenne, and H. Vaudry Genome duplications within the Xenopodinae do not increase the multiplicity of antimicrobial peptides in Silurana paratropicalis and Xenopus andrei skin secretions Comp Biochem Physiol D: Genomics Proteomics 6 2011 206 212
29. V. Muñoz, and L. Serrano Elucidating the folding problem of helical peptides using empirical parameters Nature Struct Biol 1 1994 399 409
30. J.P. Powers, and R.E. Hancock The relationship between peptide structure and antibacterial activity Peptides 24 2003 1681 1691 (Pubitemid 38198075)
31. M.O. Rodel Herpetofauna of West Africa. Vol. I: amphibians of the West African savanna 2000 Edition Chimaira Frankfurt
32. K.P. Sai, M.V. Jagannadham, M. Vairamani, N.P. Raju, A.S. Devi, and R. Nagaraj Tigerinins: novel antimicrobial peptides from the Indian frog Rana tigerina J Biol Chem 276 2001 2701 2707
33. G. Song, M. Zhou, W. Chen, T. Chen, B. Walker, and C. Shaw HV-BBI - a novel amphibian skin Bowman-Birk-like trypsin inhibitor Biochem Biophys Res Commun 372 2008 191 196
34. K. Ukena, H. Vaudry, J. Leprince, and K. Tsutsui Molecular evolution and functional characterization of the orexigenic peptide 26RFa and its receptor in vertebrates Cell Tissue Res 343 2011 475 481
35. C. Vigny The mating calls of 12 species and subspecies of the genus Xenopus (Amphibia: Anura) J Zool, London 188 1979 103 122
36. T. Wieprecht, M. Dathe, E. Krause, M. Beyermann, W.L. Maloy, and D.L. MacDonald Modulation of membrane activity of amphipathic, antibacterial peptides by slight modifications of the hydrophobic moment FEBS Lett 417 1997 135 140 (Pubitemid 27490489)
37. H.V. Westerhoff, M. Zasloff, J.L. Rosner, R.W. Hendler, A. De Waal, and A. Vaz Gomes Functional synergism of the magainins PGLa and magainin-2 in Escherichia coli, tumor cells and liposomes Eur J Biochem 228 1995 257 264
38. S. Yuzhu, L. Yi, W. Lijun, Y. Hailong, Z. Keyun, and L. Ren Purification, characterization and cloning of two novel tigerinin-like peptides from skin secretions of Fejervarya cancrivora Peptides 7 2009 1228 1232
39. L. Zhang, and T.J. Falla Potential therapeutic application of host defense peptides Methods Mol Biol 618 2010 303 327