The impact of texas red on lipid bilayer properties

Journal of Physical Chemistry B

Volumn 115, Issue 26, 2011, Pages 8500-8505

  Skaug, Michael J ^a   Longo, Marjorie L ^a   Faller, Roland ^a  

^a University of California Davis   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FLUORESCENCE; LIQUIDS; MOLECULAR DYNAMICS;

1 ,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHOCHOLINE; ATOMISTIC MOLECULAR DYNAMICS SIMULATIONS; BI-LAYER; DPPC MOLECULES; FLUORESCENCE LABELING; FLUORESCENT LABELING; LIPID SYSTEMS;

LIPID BILAYERS;

EID: 79959997407     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp203738m     Document Type: Article

References (48)

1. Baumgart, T.; Hess, S. T.; Webb, W. W. Nature 2003, 425, 821-824
2. Schwille, P.; Korlach, J.; Webb, W. Cytometry 1999, 36, 176-182
3. de Almeida, R.; Loura, L.; Fedorov, A.; Prieto, M. J. Mol. Biol. 2005, 346, 1109-1120
4. Schutz, G. J.; Sonnleitner, M.; Hinterdorfer, P.; Schindler, H. Mol. Membr. Biol. 2000, 17, 17-29
5. Veatch, S. L.; Leung, S. S. W.; Hancock, R. E. W.; Thewalt, J. L. J. Phys. Chem. B 2007, 111, 502-504
6. Juhasz, J.; Davis, J.; Sharom, F. Biochem. J. 2010, 430, 415-423
7. Bouvrais, H.; Pott, T.; Bagatolli, L.; Ipsen, J.; Méléard, P. Biochim. Biophys. Acta, Biomembr. 2010, 1738, 1333-1337
8. Daniel, S.; Diaz, A.; Martinez, K.; Bench, B.; Albertorio, F.; Cremer, P. J. Am. Chem. Soc. 2007, 129, 8072-8072
9. Groves, J. T.; Ulman, N.; Boxer, S. G. Science 1997, 275, 651-653
10. Brozell, A.; Muha, M.; Sanii, B.; Parikh, A. J. Am. Chem. Soc. 2006, 128, 62-63
11. Veatch, S. L.; Keller, S. L. Biochim. Biophys. Acta 2005, 1746, 172-185
12. Titus, J.; Haugland, R.; Sharrow, S.; Segal, D. J. Immunol. Methods 1982, 50, 193-204
13. Baumgart, T.; Hunt, G.; Farkas, E. R.; Webb, W. W.; Feigenson, G. W. Biochim. Biophys. Acta, Biomembr. 2007, 1768, 2182-2194
14. Cascales, J.J. L.; Huertas, M.; de la Torre, J. G. Biophys. Chem. 1997, 69, 1-8
15. Repáková, J.; Čapková, P.; Holopainen, J. M.; Vattulainen, I. J. Phys. Chem. B 2004, 108, 13438-13448
16. Repáková, J.; Holopainen, J. M.; Morrow, M. R.; McDonald, M. C.; Čapková, P.; Vattulainen, I. Biophys. J. 2005, 88, 3398-3410
17. Hoff, B.; Strandberg, E.; Ulrich, A. S.; Tieleman, D.; Posten, C. Biophys. J. 2005, 88, 1818-1827
18. Čurdová, J.; Čapková, P.; Plášek, J.; Repáková, J.; Vattulainen, I. J. Phys. Chem. B 2007, 111, 3640-3650
19. Loura, L. M.; Ramalho, J. P. Biochim. Biophys. Acta 2007, 1768, 467-478
20. Loura, L. M.; Fernandes, F.; Fernandes, A.; Ramalho, J. P. Biochim. Biophys. Acta, Biomembr. 2008, 1778, 491-501
21. Repáková, J.; Holopainen, J. M.; Karttunen, M.; Vattulainen, I. J. Phys. Chem. B 2006, 110, 15403-15410
22. Gullapalli, R.; Demirel, M.; Butler, P. Phys. Chem. Chem. Phys. 2008, 10, 3548-3560
23. Lindahl, E.; Hess, B.; van der Spoel, D. J. Mol. Model 2001, 7, 306-317
24. Berendsen, H. J. C.; van der Spoel, D.; van Drunen, R. Comput. Phys. Commun. 1995, 91, 43-56
25. van der Spoel, D.; Lindahl, E.; Hess, B.; Groenhof, G.; Mark, A.; Berendsen, H. J. C. J. Comput. Chem. 2005, 26, 1701
26. Berger, O.; Edholm, O.; Jahnig, F. Biophys. J. 1997, 72, 2002-2013
27. Skaug, M.; Longo, M. L.; Faller, R. J. Phys. Chem. B 2009, 113, 8758-8766
28. Berendsen, H. J. C.; Postma, J. P. M.; van Gunsteren, W. F.; Hermans, J. In Intermolecular Forces; Pullman, B., Ed.; D. Reidel Publishing Company: Dordrecht, The Netherlands, 1981; Chapter Interaction models for water in relation to protein hydration, pp 331-342.
29. van Gunsteren, W. F.; Berendsen, H. J. C. Groningen Molecular Simulation (GROMOS) Library Manual; BIOMOS b.v.: Groningen, The Netherlands, 1987.
30. Berendsen, H. J. C.; Postma, J.; van Gunsteren, W.; DiNola, A.; Haak, J. J. Chem. Phys. 1984, 81, 3684-3690
31. Hess, B.; Bekker, H.; Berendsen, H. J. C.; Fraaije, J. J. Comput. Chem. 1997, 18, 1463-1472
32. Miyamoto, S.; Kollman, P. J. Comput. Chem. 1992, 13, 952-962
33. Essmann, U.; Perera, L.; Berkowitz, M.; Darden, T.; Lee, H.; Pedersen, L. J. Chem. Phys. 1995, 103, 8577
34. Dickey, A. N.; Faller, R. Biophys. J. 2008, 95, 2636-2646
35. Guo, L.; Har, J. Y.; Sankaran, J.; Hong, Y.; Kannan, B.; Wohland, T. ChemPhysChem. 2008, 9, 721-728
36. Wohlert, J.; Edholm, O. J. Chem. Phys. 2006, 125, 204703
37. Vaz, W. L. C.; Clegg, R. M.; Hallmann, D. Biochemistry 1985, 24, 781-786
38. Saffman, P. G.; Delbruck, M. Proc. Natl. Acad. Sci. U. S. A. 1975, 72, 3111-3113
39. Ramadurai, S.; Holt, A.; Krasnikov, V.; van den Bogaart, G.; Killian, J.; Poolman, B. J. Am. Chem. Soc. 2009, 131, 12650-12656
40. Lee, C.; Petersen, N. Biophys. J. 2003, 84, 1756-1764
41. Guigas, G.; Weiss, M. Biophys. J. 2006, 91, 2393-2398
42. Liu, C.; Paprica, A.; Petersen, N. Biophys. J. 1997, 73, 2580-2587
43. Putzel, G. G.; Schick, M. Biophys. J. 2009, 96, 4935-4940
44. Putzel, G. G.; Schick, M. Biophys. J. 2008, 95, 4756-4762
45. Veatch, S. L.; Polozov, I. J.; Gawrisch, K.; Keller, S. L. Biophys. J. 2004, 86, 2910-2922
46. Davis, J.; Clair, J.; Juhasz, J. Biophys. J. 2009, 96, 521-539
47. Juhasz, J.; Sharom, F.; Davis, J. Biochim. Biophys. Acta, Biomembr. 2009, 1788, 2541-2552
48. Lozano, M. M.; Longo, M. L. Soft Matter 2009, 5, 1822-1834