Erratum: A flow cytometry based oligotrophic pollutant exposure test to detect bacterial growth inhibition and cell injury (Environmental Science and Technology (2011) 45:13 (5820-5827) DOI:10.1021/es200591v);A flow cytometry based oligotrophic pollutant exposure test to detect bacterial growth inhibition and cell injury

Environmental Science and Technology

Volumn 45, Issue 13, 2011, Pages 5820-5827

  Czechowska, Kamila ^a   Van Der Meer, Jan Roelof ^a  

^a UNIVERSITY OF LAUSANNE   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ASSAYS; BACTERIA; CELLS; CYTOLOGY; FLOW CYTOMETRY; GROWTH RATE; POLLUTION;

AQUATIC ENVIRONMENTS; CHEMICAL POLLUTANTS; COLONY FORMING UNITS; MACROSCOPIC METHODS; OLIGOTROPHIC CONDITIONS; POLLUTANT EXPOSURES; POPULATION GROWTH RATES; PSEUDOMONAS FLUORESCENS;

POPULATION STATISTICS;

2 CHLOROBIPHENYL; 4 CHLOROPHENOL; ETHIDIUM BROMIDE; NAPHTHALENE; TETRADECANE; TOXIC GAS; UNCLASSIFIED DRUG;

ALGA; AQUATIC ENVIRONMENT; ASSESSMENT METHOD; BACTERIUM; BIOASSAY; BIOMARKER; CELL ORGANELLE; CHEMICAL POLLUTANT; COMPLIANCE; DYE; FLOW CYTOMETRY; GROWTH RESPONSE; INHIBITION; INJURY; MEMBRANE; NUMERICAL MODEL; OIL POLLUTION; OLIGOTROPHIC ENVIRONMENT; POLLUTION EFFECT; POPULATION DENSITY; POPULATION GROWTH; TOXICITY; TURBIDITY;

ANALYTIC METHOD; ARTICLE; BACTERIAL GROWTH; CELL COUNT; CELL DAMAGE; CELL DEATH; FLOW CYTOMETRY; GROWTH INHIBITION; NONHUMAN; OLIGOTROPHIC POLLUTANT EXPOSURE TEST; PSEUDOMONAS FLUORESCENS;

ALGAE; BACTERIA (MICROORGANISMS); PSEUDOMONAS FLUORESCENS;

EID: 79959900703     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es300627b     Document Type: Erratum

References (36)

1. Dizer, H.; Wittekindt, E.; Fischer, B.; Hansen, P. D. The cytotoxic and genotoxic potential of surface water and wastewater effluents as determined by bioluminescence, umu-assays and selected biomarkers Chemosphere 2002, 46, 225-233 (Pubitemid 34072364)
2. Jos, A.; Repetto, G.; Ríos, J. C.; del Peso, A.; Salguero, M.; Hazen, M. J.; Molero, M. L.; Fernández-Freire, P.; Pérez- Martín, J. M.; Labrador, V.; Cameán, A. Ecotoxicological evaluation of the additive butylated hydroxyanisole using a battery with six model systems and eighteen endpoints Aquat. Toxicol. 2005, 71 (2) 183-192 (Pubitemid 40103499)
3. Jos, A.; Repetto, G.; Rios, J. C.; del Peso, A.; Salguero, M.; Camean, A. M. Aquatic toxicity assessment of the additive 6-methylcoumarine using four experimental systems Arch. Environ. Contam. Toxicol. 2009, 56 (1) 52-59
4. Bitton, G.; Koopman, B. Bacterial and enzymatic bioassays for toxicity testing in the environment Rev. Environ. Contam. Toxicol. 1992, 125, 1-22
5. Alga, Growth Inhibition Test, Test No. 201. Report from the OECD Expert Group on Ecotoxicology; OECD Publishing: Paris, 2006.
6. Galloway, T. S. Biomarkers in environmental and human health risk assessment Mar. Pollut. Bull. 2006, 53, 606-613 (Pubitemid 44737863)
7. Eggen, R. I.; Behra, R.; Burkhardt-Holm, P.; Escher, B. I.; Schweigert, N. Challenges in ecotoxicology Environ. Sci. Technol. 2004, 38 (3) 58A-64A (Pubitemid 38168728)
8. Water quality determination of genotoxity of water and waste water using the umu-test. ISO/CD 13829, 1999.
9. Koutny, M.; Zaoralkova, L. Miniaturized kinetic growth inhibition assay with denitrifying bacteria Paracoccus denitrificans Chemosphere 2005, 60 (1) 49-54 (Pubitemid 40725459)
10. Pepi, M.; Heipieper, H. J.; Fischer, J.; Ruta, M.; Volterrani, M.; Focardi, S. E. Membrane fatty acids adaptive profile in the simultaneous presence of arsenic and toluene in Bacillus sp. ORAs2 and Pseudomonas sp. ORAs5 strains Extremophiles 2008, 12 (3) 343-349
11. Duldhardt, I.; Nijenhuis, I.; Schauer, F.; Heipieper, H. J. Anaerobically grown Thauera aromatica, Desulfococcus multivorans, Geobacter sulfurreducens are more sensitive towards organic solvents than aerobic bacteria Appl. Microbiol. Biotechnol. 2007, 77 (3) 705-711 (Pubitemid 350125496)
12. Hendrickx, B.; Dejonghe, W.; Boenne, W.; Brennerova, M.; Cernik, M.; Lederer, T.; Bucheli-Witschel, M.; Bastiaens, L.; Verstraete, W.; Top, E. M.; Diels, L.; Springael, D. Dynamics of an oligotrophic bacterial aquifer community during contact with a groundwater plume contaminated with benzene, toluene, ethylbenzene, and xylenes: An in situ mesocosm study Appl. Environ. Microbiol. 2005, 71 (7) 3815-3825 (Pubitemid 40980551)
13. de Lipthay, J. R.; Tuxen, N.; Johnsen, K.; Hansen, L. H.; Albrechtsen, H.-J.; Bjerg, P.; Aamand, J. In situ exposure to low herbicide concentrations affects microbial population composition and catabolic gene frequency in an aerobic shallow aquifer Appl. Environ. Microbiol. 2003, 69, 461-467 (Pubitemid 36077508)
14. McKew, B. A.; Coulon, F.; Osborn, M. A.; Timmis, K. N.; McGenity, T. J. Determining the identity and roles of oil-metabolising marine bacteria from the Thames Estuary, UK Environ. Microbiol. 2007, 9, 165-176 (Pubitemid 46059007)
15. Johnson, D. R.; Czechowska, K.; Chevre, N.; Van Der Meer, J. R. Toxicity of triclosan, penconazole and metalaxyl on Caulobacter crescentus and a freshwater microbial community as assessed by flow cytometry Environ. Microbiol. 2009, 11, 1682-1691
16. Button, D. K. Nutrient uptake by microorganisms according to kinetic parameters from theory as related to cytoarchitecture Microbiol. Mol. Biol. Rev. 1998, 62 (3) 636-45 (Pubitemid 28415547)
17. Czechowska, K.; Johnson, D.; Van Der Meer, J. R. Use of flow cytometric methods for single-cell analysis in environmental microbiology Curr. Opin. Microbiol. 2008, 11, 205-212
18. Tecon, R.; Van Der Meer, J. R. Information from single-cell bacterial biosensors: What is it good for? Curr. Opin. Biotechnol. 2006, 17 (1) 4-10 (Pubitemid 43190751)
19. Remus-Emsermann, M. N.; Leveau, J. H. Linking environmental heterogeneity and reproductive success at single-cell resolution ISME J. 2010, 4 (2) 215-222
20. Berney, M.; Hammes, F.; Bosshard, F.; Weilenmann, H. U.; Egli, T. Assessment and interpretation of bacterial viability by using the LIVE/DEAD BacLight Kit in combination with flow cytometry Appl. Environ. Microbiol. 2007, 73 (10) 3283-3290 (Pubitemid 46834980)
21. Bosshard, F.; Berney, M.; Scheifele, M.; Weilenmann, H.-U.; Egli, T. Solar disinfection (SODIS) and subsequent dark storage of Salmonella typhimurium and Shigella flexneri monitored by flow cytometry Microbiology 2009, 155, 1310-1317
22. Parnell, J. J.; Park, J.; Denef, V.; Tsoi, T.; Hashsham, S.; Quensen, J., 3rd; Tiedje, J. M. Coping with polychlorinated biphenyl (PCB) toxicity: Physiological and genome-wide responses of Burkholderia xenovorans LB400 to PCB-mediated stress Appl. Environ. Microbiol. 2006, 72 (10) 6607-6614 (Pubitemid 44582900)
23. Shimomura, Y.; Ohno, R.; Kawai, F.; Kimbara, K. Method for assessment of viability and morphological changes of bacteria in the early stage of colony formation on a simulated natural environment Appl. Environ. Microbiol. 2006, 72 (7) 5037-42 (Pubitemid 44078836)
24. Wiacek, C.; Müller, S.; Benndorf, D. A cytomic approach reveals population heterogeneity of Cupriavidus necator in response to harmful phenol concentrations Proteomics 2006, 6 (22) 5983-5994 (Pubitemid 44851384)
25. Gich, F.; Schubert, K.; Bruns, A.; Hoffelner, H.; Overmann, J. Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community Appl. Environ. Microbiol. 2005, 71 (10) 5908-5919 (Pubitemid 41456884)
26. Kent, A. D.; Smith, D. J.; Benson, B. J.; Triplett, E. W. Web-based phylogenetic assignment tool for analysis of terminal restriction fragment length polymorphism profiles of microbial communities Appl. Environ. Microbiol. 2003, 69 (11) 6768-6776 (Pubitemid 37420216)
27. Comte, J.; Jacquet, S.; Viboud, S.; Fontvieille, D.; Millery, A.; Paolini, G.; Domaizon, I. Microbial community structure and dynamics in the largest natural French lake (Lake Bourget) Microb. Ecol. 2006, 52 (1) 72-89 (Pubitemid 44421154)
28. Sentchilo, V. S.; Perebituk, A. N.; Zehnder, A. J.; Van Der Meer, J. R. Molecular diversity of plasmids bearing genes that encode toluene and xylene metabolism in Pseudomonas strains isolated from different contaminated sites in Belarus Appl. Environ. Microbiol. 2000, 66 (7) 2842-2852 (Pubitemid 30497590)
29. Gerhardt, P.; Murray, R. G. E.; Costilow, R. N.; Nester, E. W.; Wood, W. A.; Krieg, N. R.; Briggs Phillips, G. (Eds.) Manual of Methods for General Bacteriology; American Society for Microbiology: Washington, DC, 1981.
30. Ambient Water Quality Guidelines for Naphthalene To Protect Freshwater Life: Overview Report, First Update; Science and Information Branch, Water Stewardship Division, Ministry of Environment: British Columbia, Canada, 2007; ISBN 978-0-7726-5875-3.
31. Yates, G. T.; Smotzer, T. On the lag phase and initial decline of microbial growth curves J. Theor. Biol. 2007, 244, 511-517 (Pubitemid 46027148)
32. Cronin, U. P.; Wilkinson, M. G. Monitoring growth phase-related changes in phosphatidylcholine-specific phospholipase C production, adhesions properties and physiology of Bacillus cereus vegetative cells J. Ind. Microbiol. Biotechnol. 2008, 35, 1695-1703
33. Pin, C.; Rolfe, M. D.; Munoz-Cuevas, M.; Hinton, J. C.; Peck, M. W.; Walton, N. J.; Baranyi, J. Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase BMC Syst. Biol. 2009, 3, 108
34. Mutschler, H.; Gebhardt, M.; Shoeman, R. L.; Meinhart, A. A novel mechanism of programmed cell death in bacteria by toxin-antitoxin systems corrupts peptidoglycan synthesis PLoS Biol. 2011, 9 (3) e1001033
35. Wang, Y.; Hammes, F.; De Roy, K.; Verstraete, W.; Boon, N. Past, present and future applications of flow cytometry in aquatic microbiology Trends Biotechnol 2010, 28 (8) 416-424
36. Regulation (EC) No. 1907/2006 of the European Parliament and of the Council of 18 December 2006 concerning the Registration, Evaluation, Authorisation and Restriction of Chemicals (REACH), establishing a European Chemicals Agency, amending Directive 1999/45/EC and repealing Council Regulation (EEC) No. 793/93 and Commission Regulation (EC) No. 1488/94 as well as Council Directive 76/769/EEC and Commission Directives 91/155/EEC, 93/67/EEC, 93/105/EC and 2000/21/EC; 2006.