Discovery and characterization of novel cyclotides originated from chimeric precursors consisting of albumin-1 chain a and cyclotide domains in the fabaceae family

Journal of Biological Chemistry

Volumn 286, Issue 27, 2011, Pages 24275-24287

  Nguyen, Giang Kien Truc ^a   Zhang, Sen ^a   Nguyen, Ngan Thi Kim ^a   Nguyen, Phuong Quoc Thuc ^a   Chiu, Ming Sheau ^a   Hardjojo, Antony ^a   Tam, James P ^a  

^a NANYANG TECHNOLOGICAL UNIVERSITY   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

ANTI-MICROBIAL ACTIVITY; BIOACTIVE FRACTIONS; CONVERGENT EVOLUTION; CUCURBITACEAE; CYCLIC STRUCTURES; CYCLOTIDES; DIFFERENT MECHANISMS; HEAT EXTRACTION; HELA CELL; HORIZONTAL GENE TRANSFER; NUCLEAR GENOMES; PLANT TISSUES; RARE EVENT; RUBIACEAE; SEQUENCE HOMOLOGY;

AMINO ACIDS; ESCHERICHIA COLI; GENE TRANSFER; GENES; TISSUE;

BIOLOGY;

ALBUMIN; ANTIMICROBIAL PEPTIDE D4R; CYCLOTIDE; POLYPEPTIDE ANTIBIOTIC AGENT; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANTIBACTERIAL ACTIVITY; ARTICLE; CHIMERA; CLITORIA TERNATEA; CONTROLLED STUDY; DISULFIDE BOND; DRUG CYTOTOXICITY; DRUG SCREENING; DRUG STRUCTURE; ENTEROCOCCUS FAECALIS; ESCHERICHIA COLI; HUMAN; HUMAN CELL; IC 50; KLEBSIELLA PNEUMONIAE; LEGUME; NONHUMAN; NUCLEOTIDE SEQUENCE; PEPTIDE ANALYSIS; PRIORITY JOURNAL; PROTEIN DOMAIN; PSEUDOMONAS AERUGINOSA; SEQUENCE HOMOLOGY; STAPHYLOCOCCUS AUREUS;

AMINO ACID SEQUENCE; ANTI-INFECTIVE AGENTS; CLITORIA; CYCLOTIDES; CYTOTOXINS; ESCHERICHIA COLI; EVOLUTION, MOLECULAR; GENE TRANSFER, HORIZONTAL; GENOME, PLANT; HELA CELLS; HUMANS; MOLECULAR SEQUENCE DATA; PLANT PROTEINS; PROTEIN PRECURSORS; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SEQUENCE HOMOLOGY, AMINO ACID;

CLITORIA TERNATEA; CUCURBITACEAE; ESCHERICHIA COLI; FABACEAE; RUBIACEAE; VIOLACEAE;

EID: 79959864353     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.229922     Document Type: Article

References (58)

1. Mukherjee, P. K., Kumar, V., Kumar, N. S., and Heinrich, M. (2008) J. Ethnopharmacol. 120, 291-301
2. Daisy, P., Santosh, K., and Rajathi, M. (2009) Afr. J. Microbiol. Res. 3, 287-291
3. Rai, K. S., Murthy, K. D., Karanth, K. S., Nalini, K., Rao, M. S., and Srinivasan, K. K. (2002) Fitoterapia 73, 685-689
4. Jain, N. N., Ohal, C. C., Shroff, S. K., Bhutada, R. H., Somani, R. S., Kasture, V. S., and Kasture, S. B. (2003) Pharmacol. Biochem. Behav. 75, 529-536
5. Kulkarni, C., Pattanshetty, J. R., and Amruthraj, G. (1988) Indian J. Exp. Biol. 26, 957-960
6. Rai, K. S., Murthy, K. D., Karanth, K. S., and Rao, M. S. (2001) Indian J. Physiol. Pharmacol. 45, 305-313
7. Lay, F. T., and Anderson, M. A. (2005) Curr. Protein Pept. Sci. 6, 85-101
8. Heitz, A., Avrutina, O., Le-Nguyen, D., Diederichsen, U., Hernandez, J. F., Gracy, J., Kolmar, H., and Chiche, L. (2008) BMC Struct. Biol. 8, 54-71
9. Broekaert, W. F., Cammue, B. P., DeBolle, M. F., Thevissen, K., DeSamblanx, G. W., and Osborn, R. W. (1997) Crit. Rev. Plant Sci. 16, 297-323
10. Broekaert, W. F., Mariën, W., Terras, F. R., De Bolle, M. F., Proost, P., Van Damme, J., Dillen, L., Claeys, M., Rees, S. B., Vanderleyden, J., and Cammue, B. P. (1992) Biochemistry 31, 4308-4314
11. Louis, S., Delobel, B., Gressent, F., Duport, G., Diol, O., Rahioui, I., Charles, H., and Rahbé, Y. (2007) Phytochemistry 68, 521-535
12. Kolmar, H. (2009) Curr. Opin. Pharmacol. 9, 608-614
13. Louis, S., Delobel, B., Gressent, F., Rahioui, I., Quillien, L., Vallier, A., and Rahbé, Y. (2004) Plant Sci. 167, 705-714
14. Da Silva, P., Strzepa, A., Jouvensal, L., Rahioui, I., Gressent, F., and Delmas, A. F. (2009) Biopolymers 92, 436-444
15. Dun, X. P., Wang, J. H., Chen, L., Lu, J., Li, F. F., Zhao, Y. Y., Cederlund, E., Bryzgalova, G., Efendic, S., Jörnvall, H., Chen, Z. W., and Bergman, T. (2007) FEBS J. 274, 751-759
16. Le Gall, M., Quillien, L., Guéguen, J., Rogniaux, H., and Sève, B. (2005) J. Nutr. 135, 1215-1222
17. Hanada, K., Nishiuchi, Y., and Hirano, H. (2003) Eur. J. Biochem. 270, 2583-2592
18. Rahioui, I., Laugier, C., Balmand, S., Da Silva, P., Rahbe, Y., and Gressent, F. (2007) Biochimie 89, 1539-1543
19. Dun, X. P., Li, F. F., Wang, J. H., and Chen, Z. W. (2008) Peptides 29, 891-897
20. Craik, D. J., Daly, N. L., Bond, T., and Waine, C. (1999) J. Mol. Biol. 294, 1327-1336
21. Tam, J. P., Lu, Y. A., Yang, J. L., and Chiu, K. W. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 8913-8918
22. Hernandez, J. F., Gagnon, J., Chiche, L., Nguyen, T. M., Andrieu, J. P., Heitz, A., Trinh Hong, T., Pham, T. T., and Le Nguyen, D. (2000) Biochemistry 39, 5722-5730
23. Daly, N. L., Rosengren, K. J., and Craik, D. J. (2009) Adv. Drug Deliv. Rev. 61, 918-930
24. Crooks, G. E., Hon, G., Chandonia, J. M., and Brenner, S. E. (2004) Genome Res. 14, 1188-1190
25. Sze, S. K., Wang, W., Meng, W., Yuan, R., Guo, T., Zhu, Y., and Tam, J. P. (2009) Anal. Chem. 81, 1079-1088
26. Colgrave, M. L., and Craik, D. J. (2004) Biochemistry 43, 5965-5975
27. Poth, A. G., Colgrave, M. L., Philip, R., Kerenga, B., Daly, N. L., Anderson, M. A., and Craik, D. J. (2011) ACS Chem. Biol. 6, 345-355
28. Devi, B. P., Boominathan, R., and Mandal, S. C. (2003) Fitoterapia 74, 345-349
29. Lehrer, R. I., Rosenman, M., Harwig, S. S., Jackson, R., and Eisenhauer, P. (1991) J. Immunol. Methods 137, 167-173
30. Tam, J. P., Lu, Y. A., and Yang, J. L. (2002) Eur. J. Biochem. 269, 923-932
31. Papadopoulos, J. S., and Agarwala, R. (2007) Bioinformatics 23, 1073-1079
32. Page, R. D. (1996) Comput. Appl. Biosci. 12, 357-358
33. Dutton, J. L., Renda, R. F., Waine, C., Clark, R. J., Daly, N. L., Jennings, C. V., Anderson, M. A., and Craik, D. J. (2004) J. Biol. Chem. 279, 46858-46867
34. Watanabe, Y., Barbashov, S. F., Komatsu, S., Hemmings, A. M., Miyagi, M., Tsunasawa, S., and Hirano, H. (1994) Eur. J. Biochem. 224, 167-172
35. Tan, J. Z., Lou, C. F., Zhang, G. Y., Sun, B. Y., and Ping, Y. J. (2003) Yi Chuan 25, 168-172
36. Meyer, B., Houlné, G., Pozueta-Romero, J., Schantz, M. L., and Schantz, R. (1996) Plant Physiol. 112, 615-622
37. Chen, J. J., Chen, G. H., Hsu, H. C., Li, S. S., and Chen, C. S. (2004) J. Agric. Food Chem. 52, 2256-2261
38. Silverstein, K. A., Moskal, W. A., Jr., Wu, H. C., Underwood, B. A., Graham, M. A., Town, C. D., and VandenBosch, K. A. (2007) Plant J. 51, 262-280
39. Graham, M. A., Silverstein, K. A., and VandenBosch, K. A. (2008) Crop Sci. 48, S3-S11
40. Carvalho Ade, O., and Gomes, V. M. (2009) Peptides 30, 1007-1020
41. Gray, W. R. (1993) Protein Sci. 2, 1732-1748
42. Göransson, U., and Craik, D. J. (2003) J. Biol. Chem. 278, 48188-48196
43. Huang, Y. H., Colgrave, M. L., Daly, N. L., Keleshian, A., Martinac, B., and Craik, D. J. (2009) J. Biol. Chem. 284, 20699-20707
44. Lindholm, P., Göransson, U., Johansson, S., Claeson, P., Gullbo, J., Larsson, R., Bohlin, L., and Backlund, A. (2002) Mol. Cancer Ther. 1, 365-369
45. Wang, C. K., Colgrave, M. L., Gustafson, K. R., Ireland, D. C., Goransson, U., and Craik, D. J. (2008) J. Nat. Prod. 71, 47-52
46. Plan, M. R., Göransson, U., Clark, R. J., Daly, N. L., Colgrave, M. L., and Craik, D. J. (2007) Chembiochem 8, 1001-1011
47. Ireland, D. C., Colgrave, M. L., and Craik, D. J. (2006) Biochem. J. 400, 1-12
48. Gruber, C. W., Cemazar, M., Anderson, M. A., and Craik, D. J. (2007) Toxicon 49, 561-575
49. Yamazaki, T., Takaoka, M., Katoh, E., Hanada, K., Sakita, M., Sakata, K., Nishiuchi, Y., and Hirano, H. (2003) Eur. J. Biochem. 270, 1269-1276
50. Nishizawa, N. K., Mori, S., Watanabe, Y., and Hirano, H. (1994) Plant Cell Physiol. 35, 1079-1085
51. Bock, R. (2010) Trends Plant Sci. 15, 11-22
52. Graham, T., and Boissinot, S. (2006) J. Biomed. Biotechnol. 2006, 75327
53. Cordaux, R., and Batzer, M. A. (2009) Nat. Rev. Genet. 10, 691-703
54. Whittington, C. M., Papenfuss, A. T., Bansal, P., Torres, A. M., Wong, E. S., Deakin, J. E., Graves, T., Alsop, A., Schatzkamer, K., Kremitzki, C., Ponting, C. P., Temple-Smith, P., Warren, W. C., Kuchel, P. W., and Belov, K. (2008) Genome Res. 18, 986-994
55. Whittington, C. M., Papenfuss, A. T., Locke, D. P., Mardis, E. R., Wilson, R. K., Abubucker, S., Mitreva, M., Wong, E. S., Hsu, A. L., Kuchel, P. W., Belov, K., and Warren, W. C. (2010) Genome Biol. 11, R95
56. Trabi, M., Mylne, J. S., Sando, L., and Craik, D. J. (2009) Org. Biomol. Chem. 7, 2378-2388
57. Higgins, T. J., Chandler, P. M., Randall, P. J., Spencer, D., Beach, L. R., Blagrove, R. J., Kortt, A. A., and Inglis, A. S. (1986) J. Biol. Chem. 261, 11124-11130
58. Schneider, T. D., and Stephens, R. M. (1990) Nucleic Acids Res. 18, 6097-6100