-
1
-
-
20444419818
-
The origin of gene subfunctions and modular gene regulation
-
Force A, Cresko W, Pickett FB, Proulx S, Amemiya, Lynch M, (2005) The origin of gene subfunctions and modular gene regulation. Genetics 170: 433-446.
-
(2005)
Genetics
, vol.170
, pp. 433-446
-
-
Force, A.1
Cresko, W.2
Pickett, F.B.3
Proulx, S.4
Amemiya, L.M.5
-
2
-
-
0032893932
-
Preservation of duplicate genes by complementary, degenerative mutations
-
Force A, Lynch M, Pickett FB, Amores A, Yan YL, et al. (1999) Preservation of duplicate genes by complementary, degenerative mutations. Genetics 151: 1531-1545.
-
(1999)
Genetics
, vol.151
, pp. 1531-1545
-
-
Force, A.1
Lynch, M.2
Pickett, F.B.3
Amores, A.4
Yan, Y.L.5
-
3
-
-
33750962013
-
Intron size, abundance, and distribution within untranslated regions of genes
-
Hong X, Scofield DG, Lynch M, (2006) Intron size, abundance, and distribution within untranslated regions of genes. Mol Biol Evol 23: 2392-2404.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 2392-2404
-
-
Hong, X.1
Scofield, D.G.2
Lynch, M.3
-
4
-
-
0037197986
-
Intron evolution as a population-genetic process
-
Lynch M, (2002) Intron evolution as a population-genetic process. Proc Natl Acad Sci U S A99: 6118-6123.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 6118-6123
-
-
Lynch, M.1
-
5
-
-
30744475434
-
The origins of eukaryotic gene structure
-
Lynch M, (2006) The origins of eukaryotic gene structure. Mol Biol Evol 23: 450-468.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 450-468
-
-
Lynch, M.1
-
6
-
-
33750344923
-
Streamlining and simplification of microbial genome architecture
-
Lynch M, (2006) Streamlining and simplification of microbial genome architecture. Ann Rev Microbiol 60: 327-349.
-
(2006)
Ann Rev Microbiol
, vol.60
, pp. 327-349
-
-
Lynch, M.1
-
8
-
-
34548724489
-
The evolution of genetic networks by nonadaptive processes
-
Lynch M, (2007) The evolution of genetic networks by nonadaptive processes. Nat Rev Genet 8: 803-813.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 803-813
-
-
Lynch, M.1
-
9
-
-
34547396004
-
The frailty of adaptive hypotheses for the origins of organismal complexity
-
Lynch M, (2007) The frailty of adaptive hypotheses for the origins of organismal complexity. Proc Natl Acad Sci U S A104 (Suppl): 8597-8604.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, Issue.SUPPL.
, pp. 8597-8604
-
-
Lynch, M.1
-
10
-
-
0345306751
-
The origins of genome complexity
-
Lynch M, Conery JS, (2003) The origins of genome complexity. Science 302: 1401-1404.
-
(2003)
Science
, vol.302
, pp. 1401-1404
-
-
Lynch, M.1
Conery, J.S.2
-
11
-
-
0035697435
-
The probability of fixation of a newly arisen gene duplicate
-
Lynch M, O'Hely M, Walsh B, Force A, (2001) The probability of fixation of a newly arisen gene duplicate. Genetics 159: 1789-1804.
-
(2001)
Genetics
, vol.159
, pp. 1789-1804
-
-
Lynch, M.1
O'Hely, M.2
Walsh, B.3
Force, A.4
-
12
-
-
16344362654
-
The evolution of transcription-initiation sites
-
Lynch M, Scofield DG, Hong X, (2005) The evolution of transcription-initiation sites. Mol Biol Evol 22: 1137-1146.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1137-1146
-
-
Lynch, M.1
Scofield, D.G.2
Hong, X.3
-
13
-
-
33645214213
-
Mutation pressure and the evolution of organelle genome architecture
-
Lynch M, Koskella B, Schaack S, (2006) Mutation pressure and the evolution of organelle genome architecture. Science 311: 1727-1730.
-
(2006)
Science
, vol.311
, pp. 1727-1730
-
-
Lynch, M.1
Koskella, B.2
Schaack, S.3
-
14
-
-
58149333880
-
The cellular, developmental, and population-genetic determinants of mutation-rate evolution
-
Lynch M, (2008) The cellular, developmental, and population-genetic determinants of mutation-rate evolution. Genetics 180: 933-943.
-
(2008)
Genetics
, vol.180
, pp. 933-943
-
-
Lynch, M.1
-
15
-
-
77955090647
-
Evolution of the mutation rate
-
Lynch M, (2010) Evolution of the mutation rate. Trends Genet 26: 345-352.
-
(2010)
Trends Genet
, vol.26
, pp. 345-352
-
-
Lynch, M.1
-
16
-
-
79959828051
-
Postgenomic musings
-
Pigliucci M, (2007) Postgenomic musings. Science 317: 1172-1173.
-
(2007)
Science
, vol.317
, pp. 1172-1173
-
-
Pigliucci, M.1
-
17
-
-
43549124770
-
Population size and genome size in fishes: A closer look
-
Gregory TR, Witt JD, (2008) Population size and genome size in fishes: a closer look. Genome 51: 309-313.
-
(2008)
Genome
, vol.51
, pp. 309-313
-
-
Gregory, T.R.1
Witt, J.D.2
-
18
-
-
77957326306
-
Did genetic drift drive increases in genome complexity?
-
doi:10.1371/journal.pgen.1001080
-
Whitney KD, Garland T, (2010) Did genetic drift drive increases in genome complexity? PLoS Genet 6: e1001080 doi:10.1371/journal.pgen.1001080.
-
(2010)
PLoS Genet
, vol.6
-
-
Whitney, K.D.1
Garland, T.2
-
21
-
-
0022203256
-
Phylogenies and the comparative method
-
Felsenstein J, (1985) Phylogenies and the comparative method. Am Nat 125: 1-15.
-
(1985)
Am Nat
, vol.125
, pp. 1-15
-
-
Felsenstein, J.1
-
22
-
-
0026293261
-
Methods for the analysis of comparative data in evolutionary biology
-
Lynch M, (1991) Methods for the analysis of comparative data in evolutionary biology. Evolution 45: 1065-1080.
-
(1991)
Evolution
, vol.45
, pp. 1065-1080
-
-
Lynch, M.1
-
24
-
-
0030482765
-
Applications of phylogenetically independent contrasts: A mixed progress report
-
Ricklefs RE, Starck JM, (1996) Applications of phylogenetically independent contrasts: a mixed progress report. Oikos 77: 167-172.
-
(1996)
Oikos
, vol.77
, pp. 167-172
-
-
Ricklefs, R.E.1
Starck, J.M.2
-
25
-
-
0031472113
-
Are 'comparative methods' always necessary?
-
Björklund M, (1997) Are 'comparative methods' always necessary? Oikos 80: 607-612.
-
(1997)
Oikos
, vol.80
, pp. 607-612
-
-
Björklund, M.1
-
26
-
-
33748203042
-
A comment on phylogenetic correction
-
Rohlf FJ, (2006) A comment on phylogenetic correction. Evolution 60: 1509-1515.
-
(2006)
Evolution
, vol.60
, pp. 1509-1515
-
-
Rohlf, F.J.1
-
27
-
-
78049445172
-
Evidence that mutation is universally biased towards AT in bacteria
-
doi:10.1371/journal.pgen.1001115
-
Hershberg R, Petrov DA, (2010) Evidence that mutation is universally biased towards AT in bacteria. PLoS Genet 6: e1001115 doi:10.1371/journal.pgen.1001115.
-
(2010)
PLoS Genet
, vol.6
-
-
Hershberg, R.1
Petrov, D.A.2
-
28
-
-
78049425463
-
Evidence of selection upon genomic GC-content in bacteria
-
doi:10.1371/journal.pgen.1001107
-
Hildebrand F, Meyer A, Eyre-Walker A, (2010) Evidence of selection upon genomic GC-content in bacteria. PLoS Genet 6: e1001107 doi:10.1371/journal.pgen.1001107.
-
(2010)
PLoS Genet
, vol.6
-
-
Hildebrand, F.1
Meyer, A.2
Eyre-Walker, A.3
-
29
-
-
77957942680
-
Independent mammalian genome contractions following the KT boundary
-
Rho M, Zhou M, Gao X, Kim S, Tang H, et al. (2009) Independent mammalian genome contractions following the KT boundary. Genome Biol Evol 2009 2-12 pp. 2-12.
-
(2009)
Genome Biol Evol 2009
, vol.2-12
, pp. 2-12
-
-
Rho, M.1
Zhou, M.2
Gao, X.3
Kim, S.4
Tang, H.5
-
30
-
-
0026054313
-
Phylogenetic analyses of correlated evolution of continuous characters: A simulation study
-
Martins EP, Garland, T, (1991) Phylogenetic analyses of correlated evolution of continuous characters: a simulation study. Evolution 45: 534-557.
-
(1991)
Evolution
, vol.45
, pp. 534-557
-
-
Martins, E.P.1
Garland, T.2
-
31
-
-
77957371765
-
A role for nonadaptive processes in plant genome size evolution?
-
Whitney KD, Baack EJ, Hamrick JL, Godt MJ, et al. (2010) A role for nonadaptive processes in plant genome size evolution? Evolution 64: 2097-2109.
-
(2010)
Evolution
, vol.64
, pp. 2097-2109
-
-
Whitney, K.D.1
Baack, E.J.2
Hamrick, J.L.3
Godt, M.J.4
-
32
-
-
68149175229
-
The consequences of genetic drift for bacterial genome complexity
-
Kuo CH, Moran NA, Ochman H, (2009) The consequences of genetic drift for bacterial genome complexity. Genome Res 19: 1450-1454.
-
(2009)
Genome Res
, vol.19
, pp. 1450-1454
-
-
Kuo, C.H.1
Moran, N.A.2
Ochman, H.3
-
33
-
-
70849137211
-
Extensive, recent intron gains in Daphnia populations
-
Li W, Tucker AE, Sung W, Thomas WK, Lynch M, (2009) Extensive, recent intron gains in Daphnia populations. Science 326: 1260-1262.
-
(2009)
Science
, vol.326
, pp. 1260-1262
-
-
Li, W.1
Tucker, A.E.2
Sung, W.3
Thomas, W.K.4
Lynch, M.5
-
34
-
-
75749103383
-
Rate, molecular spectrum, and consequences of spontaneous mutations in man
-
Lynch M, (2009) Rate, molecular spectrum, and consequences of spontaneous mutations in man. Proc Natl Acad Sci U S A107: 961-968.
-
(2009)
Proc Natl Acad Sci U S A
, vol.107
, pp. 961-968
-
-
Lynch, M.1
-
35
-
-
75549087305
-
The evolution of gene duplications: Classifying and distinguishing between models
-
Innan H, Kondrashov F, (2010) The evolution of gene duplications: classifying and distinguishing between models. Nat Rev Genet 11: 97-108.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 97-108
-
-
Innan, H.1
Kondrashov, F.2
-
36
-
-
62849084273
-
The origin of genomes - not by natural selection?
-
Charlesworth B, (2008) The origin of genomes - not by natural selection? Curr Biol 18: R140.
-
(2008)
Curr Biol
, vol.18
-
-
Charlesworth, B.1
-
37
-
-
79959850214
-
Book review: The Origins of Genome Architecture
-
Charlesworth D, (2008) Book review: The Origins of Genome Architecture. Genet Res 90: 217-219.
-
(2008)
Genet Res
, vol.90
, pp. 217-219
-
-
Charlesworth, D.1
-
38
-
-
56949097722
-
Evolution of genome architecture
-
Koonin EV, (2009) Evolution of genome architecture. Int J Biochem Cell Biol 41: 298-306.
-
(2009)
Int J Biochem Cell Biol
, vol.41
, pp. 298-306
-
-
Koonin, E.V.1
-
39
-
-
69249211050
-
Intron-dominated genomes of early ancestors of eukaryotes
-
Koonin EV, (2009) Intron-dominated genomes of early ancestors of eukaryotes. J Hered 100: 618-623.
-
(2009)
J Hered
, vol.100
, pp. 618-623
-
-
Koonin, E.V.1
-
40
-
-
60349093708
-
Effective population size and patterns of molecular evolution and variation
-
Charlesworth B, (2009) Effective population size and patterns of molecular evolution and variation. Nat Rev Genet 10: 195-205.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 195-205
-
-
Charlesworth, B.1
-
41
-
-
77952837838
-
Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae)
-
Alverson AJ, Wei X, Rice DW, Stern DB, Barry K, et al. (2010) Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Mol Biol Evol 27: 1436-1448.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 1436-1448
-
-
Alverson, A.J.1
Wei, X.2
Rice, D.W.3
Stern, D.B.4
Barry, K.5
-
42
-
-
77956943288
-
Extensive loss of RNA editing sites in rapidly evolving silene mitochondrial genomes: Selection vs. retroprocessing as the driving force
-
Sloan DB, MacQueen AH, Alverson AJ, Palmer JD, Taylor DR, (2010) Extensive loss of RNA editing sites in rapidly evolving silene mitochondrial genomes: selection vs. retroprocessing as the driving force. Genetics 185: 1369-1380.
-
(2010)
Genetics
, vol.185
, pp. 1369-1380
-
-
Sloan, D.B.1
MacQueen, A.H.2
Alverson, A.J.3
Palmer, J.D.4
Taylor, D.R.5
-
43
-
-
67649519425
-
Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome: Addressing the mutational-hazard hypothesis
-
Smith DR, Lee RW, (2009) Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome: addressing the mutational-hazard hypothesis. BMC Evol Biol 9: 120.
-
(2009)
BMC Evol Biol
, vol.9
, pp. 120
-
-
Smith, D.R.1
Lee, R.W.2
-
44
-
-
77957238416
-
Low nucleotide diversity for the expanded organelle and nuclear genomes of Volvox carteri supports the mutational-hazard hypothesis
-
Smith DR, Lee RW, (2010) Low nucleotide diversity for the expanded organelle and nuclear genomes of Volvox carteri supports the mutational-hazard hypothesis. Mol Biol Evol 27: 2244-2256.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 2244-2256
-
-
Smith, D.R.1
Lee, R.W.2
|