-
1
-
-
0034933985
-
Biology of Giardia lamblia
-
Adam, R. D. 2001. Biology of Giardia lamblia. Clin. Microbiol. Rev. 14:447-475.
-
(2001)
Clin. Microbiol. Rev.
, vol.14
, pp. 447-475
-
-
Adam, R.D.1
-
3
-
-
0029859047
-
Fine structure of the human galactokinase GALK1 gene
-
Bergsma, D. J., Y. Ai, W. R. Skach, K. Nesburn, E. Anoia, S. Van Horn, and D. Stambolian. 1996. Fine structure of the human galactokinase GALK1 gene. Genome Res. 6:980-985.
-
(1996)
Genome Res.
, vol.6
, pp. 980-985
-
-
Bergsma, D.J.1
Ai, Y.2
Skach, W.R.3
Nesburn, K.4
Anoia, E.5
Van Horn, S.6
Stambolian, D.7
-
4
-
-
0031438617
-
Mitochondrial transcription initiation in the crustacean Artemia franciscana
-
Carrodeguas, J. A., and C. G. Vallejo. 1997. Mitochondrial transcription initiation in the crustacean Artemia franciscana. Eur. J. Biochem. 250:514-523.
-
(1997)
Eur. J. Biochem.
, vol.250
, pp. 514-523
-
-
Carrodeguas, J.A.1
Vallejo, C.G.2
-
5
-
-
0003887447
-
-
Blackwell Science, Malden, Mass.
-
Carroll, S. B., J. K. Grenier, and S. D. Weatherbee. 2002. From DNA to diversity. Blackwell Science, Malden, Mass.
-
(2002)
From DNA to Diversity
-
-
Carroll, S.B.1
Grenier, J.K.2
Weatherbee, S.D.3
-
6
-
-
12144288780
-
Whole genome sequence comparisons and "full-length" cDNA sequences: A combined approach to evaluate and improve Arabidopsis genome annotation
-
Castelli, V. et al. 2004. Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation. Genome Res. 14:406-413.
-
(2004)
Genome Res
, vol.14
, pp. 406-413
-
-
Castelli, V.1
-
7
-
-
10744226888
-
Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs
-
Cawley, S. et al. 2004. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs. Cell 116:499-509.
-
(2004)
Cell
, vol.116
, pp. 499-509
-
-
Cawley, S.1
-
8
-
-
0036303536
-
In vitro transcription and start site selection in Schizosaccharomyces pombe
-
Choi, W. S., M. Yan, D. Nusinow, and J. D. Gralla. 2002. In vitro transcription and start site selection in Schizosaccharomyces pombe. J. Mol. Biol. 319:1005-1013.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 1005-1013
-
-
Choi, W.S.1
Yan, M.2
Nusinow, D.3
Gralla, J.D.4
-
10
-
-
3943059570
-
High mutation rate and insertion predominance in the Caenorhabditis elegans genome
-
Denver, D. R., K. Morris, M. Lynch, and W. K. Thomas. 2004. High mutation rate and insertion predominance in the Caenorhabditis elegans genome. Nature 430:679-682.
-
(2004)
Nature
, vol.430
, pp. 679-682
-
-
Denver, D.R.1
Morris, K.2
Lynch, M.3
Thomas, W.K.4
-
11
-
-
0035890645
-
The abundance of sterile transcripts in Giardia lamblia
-
Elmendorf, H. G., S. M. Singer, and T. E. Nash. 2001. The abundance of sterile transcripts in Giardia lamblia. Nucleic Acids Res. 29:4674-4683.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 4674-4683
-
-
Elmendorf, H.G.1
Singer, S.M.2
Nash, T.E.3
-
12
-
-
0033582279
-
New estimates of the rates and effects of mildly deleterious mutation in Drosophila melanogaster
-
Fry, J. D., P. D. Keightley, S. L. Heinsohn, and S. V. Nuzhdin. 1999. New estimates of the rates and effects of mildly deleterious mutation in Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 96:574-579.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 574-579
-
-
Fry, J.D.1
Keightley, P.D.2
Heinsohn, S.L.3
Nuzhdin, S.V.4
-
13
-
-
0028300548
-
Characterization of transcription initiation, translation initiation, and poly(A) addition sites in the gene-sized macronuclear DNA molecules of Euplotes
-
Ghosh, S., J. W. Jaraczewski, L. A. Klobutcher, and C. L. Jahn. 1994. Characterization of transcription initiation, translation initiation, and poly(A) addition sites in the gene-sized macronuclear DNA molecules of Euplotes. Nucleic Acids Res. 22:214-221.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 214-221
-
-
Ghosh, S.1
Jaraczewski, J.W.2
Klobutcher, L.A.3
Jahn, C.L.4
-
14
-
-
0033852409
-
UPs and downs in bacterial transcription initiation: The role of the alpha subunit of RNA polymerase in promoter recognition
-
Gourse, R. L., W. Ross, and T. Gaal. 2000. UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition. Mol. Microbiol. 37:687-695.
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 687-695
-
-
Gourse, R.L.1
Ross, W.2
Gaal, T.3
-
15
-
-
0038586484
-
The effects of selection against spurious transcription factor binding sites
-
Hahn, M. W., J. E. Stajich, and G. A. Wray. 2003. The effects of selection against spurious transcription factor binding sites. Mol. Biol. Evol. 20:901-906.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 901-906
-
-
Hahn, M.W.1
Stajich, J.E.2
Wray, G.A.3
-
16
-
-
0022399096
-
Each of three "ATA elements" specifies a subset of the transcription initiation sites at the CYC-1 promoter of Saccharomyces cerevisiae
-
Hahn, S., E. T. Hoar, and L. Guarente. 1985. Each of three "ATA elements" specifies a subset of the transcription initiation sites at the CYC-1 promoter of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 82:8562-8566.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 8562-8566
-
-
Hahn, S.1
Hoar, E.T.2
Guarente, L.3
-
17
-
-
0023685544
-
A survey on intron and exon lengths
-
Hawkins, J. D. 1988. A survey on intron and exon lengths. Nucleic Acids Res. 16:9893-9908.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 9893-9908
-
-
Hawkins, J.D.1
-
18
-
-
0028568953
-
Identification and characterization of multiple A/T-rich cis-acting elements that control expression from Dictyostelium actin promoters: The Dictyostelium actin upstream activating sequence confers growth phase expression and has enhancer-like properties
-
Hori, R., and R. A. Firtel. 1994. Identification and characterization of multiple A/T-rich cis-acting elements that control expression from Dictyostelium actin promoters: the Dictyostelium actin upstream activating sequence confers growth phase expression and has enhancer-like properties. Nucleic Acids Res. 22:5099-5011.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5099-5011
-
-
Hori, R.1
Firtel, R.A.2
-
19
-
-
0030880579
-
A single nucleotide is a sufficient 5′ untranslated region for translation in an eukaryotic in vitro system
-
Hughes, M. J., and D. W. Andrews. 1997. A single nucleotide is a sufficient 5′ untranslated region for translation in an eukaryotic in vitro system. FEBS Lett. 414:19-22.
-
(1997)
FEBS Lett.
, vol.414
, pp. 19-22
-
-
Hughes, M.J.1
Andrews, D.W.2
-
20
-
-
0035667322
-
Overlapping genes in parasitic protist Giardia lamblia
-
Iwabe, N., and T. Miyata. 2001. Overlapping genes in parasitic protist Giardia lamblia. Gene 280:163-167.
-
(2001)
Gene
, vol.280
, pp. 163-167
-
-
Iwabe, N.1
Miyata, T.2
-
21
-
-
0032545288
-
Cloning and characterization of the 5′-flanking region of the human growth hormone secretagogue receptor gene
-
Kaji, H., S. Tai, Y. Okimura, G. Iguchi, Y. Takahashi, H. Abe, and K. Chihara. 1998. Cloning and characterization of the 5′-flanking region of the human growth hormone secretagogue receptor gene. J. Biol. Chem. 273:33885-33888.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 33885-33888
-
-
Kaji, H.1
Tai, S.2
Okimura, Y.3
Iguchi, G.4
Takahashi, Y.5
Abe, H.6
Chihara, K.7
-
22
-
-
0037012881
-
Large-scale transcriptional activity in chromosomes 21 and 22
-
Kapranov, P., S. E. Cawley, J. Drenkow, S. Bekiranov, R. L. Strausberg, S. P. Fodor, and T. R. Gingeras. 2002. Large-scale transcriptional activity in chromosomes 21 and 22. Science 296:916-919.
-
(2002)
Science
, vol.296
, pp. 916-919
-
-
Kapranov, P.1
Cawley, S.E.2
Drenkow, J.3
Bekiranov, S.4
Strausberg, R.L.5
Fodor, S.P.6
Gingeras, T.R.7
-
23
-
-
0036226603
-
BLAT-the BLAST-like alignment tool
-
Kent, W. J. 2002. BLAT-the BLAST-like alignment tool. Genome Res. 12:656-664.
-
(2002)
Genome Res.
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
24
-
-
0000800333
-
On the probability of fixation of mutant genes in populations
-
Kimura, M. 1962. On the probability of fixation of mutant genes in populations. Genetics 47:713-719.
-
(1962)
Genetics
, vol.47
, pp. 713-719
-
-
Kimura, M.1
-
25
-
-
0023660877
-
At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells
-
Kozak, M. 1987. At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells. J. Mol. Biol. 196:947-950.
-
(1987)
J. Mol. Biol.
, vol.196
, pp. 947-950
-
-
Kozak, M.1
-
26
-
-
0028607170
-
Determinants of translational fidelity and efficiency in vertebrate mRNAs
-
-. 1994. Determinants of translational fidelity and efficiency in vertebrate mRNAs. Biochimie 76:815-821.
-
(1994)
Biochimie
, vol.76
, pp. 815-821
-
-
-
27
-
-
0037121050
-
Pushing the limits of the scanning mechanism for initiation of translation
-
-. 2002. Pushing the limits of the scanning mechanism for initiation of translation. Gene 299:1-34.
-
(2002)
Gene
, vol.299
, pp. 1-34
-
-
-
28
-
-
0034081817
-
The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters
-
Kutach, A. K., and J. T. Kadonaga. 2000. The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters. Mol. Cell. Biol. 20:4754-4764.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4754-4764
-
-
Kutach, A.K.1
Kadonaga, J.T.2
-
29
-
-
0003421005
-
-
Sinauer Associates, Sunderland, Mass.
-
Li, W.-H. 1997. Molecular evolution. Sinauer Associates, Sunderland, Mass.
-
(1997)
Molecular Evolution
-
-
Li, W.-H.1
-
30
-
-
0032980731
-
Analysis of a ubiquitous promoter element in a primitive eukaryote: Early evolution of the initiator element
-
Liston, D. R., and P. J. Johnson. 1999. Analysis of a ubiquitous promoter element in a primitive eukaryote: early evolution of the initiator element. Mol. Cell. Biol. 19:2380-2388.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 2380-2388
-
-
Liston, D.R.1
Johnson, P.J.2
-
31
-
-
0028108315
-
Transcription initiation sites for the potato mitochondrial gene coding for subunit 9 of ATP synthase (atp9)
-
Lizama, L., L. Holuigue, and X. Jordana. 1994. Transcription initiation sites for the potato mitochondrial gene coding for subunit 9 of ATP synthase (atp9). FEBS Lett. 349:243-248.
-
(1994)
FEBS Lett.
, vol.349
, pp. 243-248
-
-
Lizama, L.1
Holuigue, L.2
Jordana, X.3
-
32
-
-
0030571478
-
Generality of a functional initiator consensus sequence
-
Lo, K., and S. T. Smale. 1996. Generality of a functional initiator consensus sequence. Gene 182:13-22.
-
(1996)
Gene
, vol.182
, pp. 13-22
-
-
Lo, K.1
Smale, S.T.2
-
33
-
-
0037197986
-
Intron evolution as a population-genetic process
-
Lynch, M. 2002. Intron evolution as a population-genetic process. Proc. Natl. Acad. Sci. USA 99:6118-6123.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 6118-6123
-
-
Lynch, M.1
-
34
-
-
0345306751
-
The origins of genome complexity
-
Lynch, M., and J. S. Conery. 2003. The origins of genome complexity. Science 302:1401-1404.
-
(2003)
Science
, vol.302
, pp. 1401-1404
-
-
Lynch, M.1
Conery, J.S.2
-
35
-
-
0035697435
-
The probability of preservation of a newly arisen gene duplicate
-
Lynch, M., M. O'Hely, B. Walsh, and A. Force. 2001. The probability of preservation of a newly arisen gene duplicate. Genetics 159:1789-1804.
-
(2001)
Genetics
, vol.159
, pp. 1789-1804
-
-
Lynch, M.1
O'Hely, M.2
Walsh, B.3
Force, A.4
-
37
-
-
0025084947
-
Translation of the Saccharomyces cerevisiae tcm1 gene in the absence of a 5′-untranslated leader
-
Maicas, E., M. Shago, and J. D. Friesen. 1990. Translation of the Saccharomyces cerevisiae tcm1 gene in the absence of a 5′-untranslated leader. Nucleic Acids Res. 18:5823-5828.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5823-5828
-
-
Maicas, E.1
Shago, M.2
Friesen, J.D.3
-
39
-
-
0036797563
-
Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA
-
Meijer, H. A., and A. A. Thomas. 2002. Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA. Biochem. J. 367:1-11.
-
(2002)
Biochem. J.
, vol.367
, pp. 1-11
-
-
Meijer, H.A.1
Thomas, A.A.2
-
40
-
-
0036198887
-
Leaderless mRNAs in bacteria: Surprises in ribosomal recruitment and translational control
-
Moll, I., S. Grill, C. O. Gualerzi, and U. Bläsi. 2002. Leaderless mRNAs in bacteria: surprises in ribosomal recruitment and translational control. Mol. Microbiol. 43:239-246.
-
(2002)
Mol. Microbiol.
, vol.43
, pp. 239-246
-
-
Moll, I.1
Grill, S.2
Gualerzi, C.O.3
Bläsi, U.4
-
41
-
-
0034459468
-
Upstream open reading frames as regulators of mRNA translation
-
Morris, D. R., and A. P. Geballe. 2000. Upstream open reading frames as regulators of mRNA translation. Mol. Cell. Biol. 20:8635-8642.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8635-8642
-
-
Morris, D.R.1
Geballe, A.P.2
-
42
-
-
0022372668
-
The relationship between the "TATA" sequence and transcription initiation sites at the HIS4 gene of Saccharomyces cerevisiae
-
Nagawa, F., and G. R. Fink. 1985. The relationship between the "TATA" sequence and transcription initiation sites at the HIS4 gene of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 82:8557-8561.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 8557-8561
-
-
Nagawa, F.1
Fink, G.R.2
-
43
-
-
0010370623
-
Upstream elements required for expression of nucleoside triphosphate hydrolase genes of Toxoplasma gondii
-
Nakaar, V., D. Bermudes, K. R. Peck, and K. A. Joiner. 1998. Upstream elements required for expression of nucleoside triphosphate hydrolase genes of Toxoplasma gondii. Mol. Biochem. Parasitol. 92:229-239.
-
(1998)
Mol. Biochem. Parasitol.
, vol.92
, pp. 229-239
-
-
Nakaar, V.1
Bermudes, D.2
Peck, K.R.3
Joiner, K.A.4
-
44
-
-
0029100814
-
Analysis of the 5′ region of PMS2 reveals heterogeneous transcripts and a novel overlapping gene
-
Nicolaides, N. C., K. W. Kinzler, and B. Vogelstein. 1995. Analysis of the 5′ region of PMS2 reveals heterogeneous transcripts and a novel overlapping gene. Genomics 29:329-334.
-
(1995)
Genomics
, vol.29
, pp. 329-334
-
-
Nicolaides, N.C.1
Kinzler, K.W.2
Vogelstein, B.3
-
45
-
-
0344875226
-
Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes
-
Niimura, Y., M. Terabe, T. Gojobori, and K. Miura. 2003. Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes. Nucleic Acids Res. 31:5195-5201.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 5195-5201
-
-
Niimura, Y.1
Terabe, M.2
Gojobori, T.3
Miura, K.4
-
46
-
-
0012253746
-
Computational analysis of core promoters in the Drosophila genome
-
research0087.1-0087.12
-
Ohler, U., G. C. Liao, H. Niemann, and G. M. Rubin. 2002. Computational analysis of core promoters in the Drosophila genome. Genome Biol. 3:research0087.1-0087.12.
-
(2002)
Genome Biol.
, vol.3
-
-
Ohler, U.1
Liao, G.C.2
Niemann, H.3
Rubin, G.M.4
-
47
-
-
9144252038
-
Complete sequencing and characterization of 21,243 full-length human cDNAs
-
Ota, T. et al. 2004. Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat. Genet. 36:40-45.
-
(2004)
Nat. Genet.
, vol.36
, pp. 40-45
-
-
Ota, T.1
-
48
-
-
0035577382
-
A reassessment of the translation initiation codon in vertebrates
-
Peri, S., and A. Pandey. 2001. A reassessment of the translation initiation codon in vertebrates. Trends Genet. 17: 685-687.
-
(2001)
Trends Genet.
, vol.17
, pp. 685-687
-
-
Peri, S.1
Pandey, A.2
-
49
-
-
0034281297
-
The untranslated regions of eukaryotic mRNAs: Structure, function, evolution and bioinformatic tools for their analysis
-
Pesole, G., G. Grillo, A. Larizza, and S. Liuni. 2000. The untranslated regions of eukaryotic mRNAs: structure, function, evolution and bioinformatic tools for their analysis. Brief. Bioinform. 1:236-249.
-
(2000)
Brief. Bioinform
, vol.1
, pp. 236-249
-
-
Pesole, G.1
Grillo, G.2
Larizza, A.3
Liuni, S.4
-
50
-
-
0036087522
-
UTRdb and UTRsite: Specialized databases of sequences and functional elements of 5′ and 3′ untranslated regions of eukaryotic mRNAs. Update 2002
-
Pesole, G., S. Liuni, G. Grillo, F. Licciulli, F. Mignone, C. Gissi, and C. Saccone. 2002. UTRdb and UTRsite: specialized databases of sequences and functional elements of 5′ and 3′ untranslated regions of eukaryotic mRNAs. Update 2002. Nucleic Acids Res. 30:335-340.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 335-340
-
-
Pesole, G.1
Liuni, S.2
Grillo, G.3
Licciulli, F.4
Mignone, F.5
Gissi, C.6
Saccone, C.7
-
51
-
-
0035802386
-
Structural and functional features of eukaryotic mRNA untranslated regions
-
Pesole, G., F. Mignone, C. Gissi, G. Grillo, F. Licciulli, and S. Liuni. 2001. Structural and functional features of eukaryotic mRNA untranslated regions. Gene 276:73-81.
-
(2001)
Gene
, vol.276
, pp. 73-81
-
-
Pesole, G.1
Mignone, F.2
Gissi, C.3
Grillo, G.4
Licciulli, F.5
Liuni, S.6
-
52
-
-
0034635568
-
Evidence for DNA loss as a determinant of genome size
-
Petrov, D. A., T. A. Sangster, J. S. Johnston, D. L. Hartl, and K. L. Shaw. 2000. Evidence for DNA loss as a determinant of genome size. Science 287:1060-1062.
-
(2000)
Science
, vol.287
, pp. 1060-1062
-
-
Petrov, D.A.1
Sangster, T.A.2
Johnston, J.S.3
Hartl, D.L.4
Shaw, K.L.5
-
53
-
-
0004211673
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Ptashne, M., and A. Gann. 2002. Genes and signals. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(2002)
Genes and Signals
-
-
Ptashne, M.1
Gann, A.2
-
54
-
-
0031168217
-
The genome and genes of Neurospora crassa
-
Radford, A., and J. H. Parish. 1997. The genome and genes of Neurospora crassa. Fungal Genet. Biol. 21:258-266.
-
(1997)
Fungal Genet. Biol.
, vol.21
, pp. 258-266
-
-
Radford, A.1
Parish, J.H.2
-
55
-
-
0034781576
-
Presence of ATG triplets in 5′ untranslated regions of eukaryotic cDNAs correlates with a 'weak' context of the start codon
-
Rogozin, I. B., A. V. Kochetov, F. A. Kondrashov, E. V. Koonin, and L. Milanesi. 2001. Presence of ATG triplets in 5′ untranslated regions of eukaryotic cDNAs correlates with a 'weak' context of the start codon. Bioinformatics 17:890-900.
-
(2001)
Bioinformatics
, vol.17
, pp. 890-900
-
-
Rogozin, I.B.1
Kochetov, A.V.2
Kondrashov, F.A.3
Koonin, E.V.4
Milanesi, L.5
-
56
-
-
0034705289
-
The RNA binding protein Pub1 modulates the stability of transcripts containing upstream open reading frames
-
Ruiz-Echevarria, M. J., and S. W. Peltz. 2000. The RNA binding protein Pub1 modulates the stability of transcripts containing upstream open reading frames. Cell 101:741-751.
-
(2000)
Cell
, vol.101
, pp. 741-751
-
-
Ruiz-Echevarria, M.J.1
Peltz, S.W.2
-
57
-
-
0032903891
-
On negative selection against ATG triplets near start codons in eukaryotic and prokaryotic genomes
-
Saito, R., and M. Tomita. 1999. On negative selection against ATG triplets near start codons in eukaryotic and prokaryotic genomes. J. Mol. Evol. 48:213-217.
-
(1999)
J. Mol. Evol.
, vol.48
, pp. 213-217
-
-
Saito, R.1
Tomita, M.2
-
58
-
-
0016154301
-
The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to non-sense triplets and ribosome binding sites
-
Shine, J., and L. Dalgarno. 1974. The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to non-sense triplets and ribosome binding sites. Proc. Natl. Acad. Sci. USA 17:1342-1346.
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.17
, pp. 1342-1346
-
-
Shine, J.1
Dalgarno, L.2
-
59
-
-
0030844331
-
Transcription initiation is controlled by three core promoter elements in the hg15 gene of the protozoan parasite Entamoeba histolytica
-
Singh, U., J. B. Rogers, B. J. Mann, and W. A. Petri Jr. 1997. Transcription initiation is controlled by three core promoter elements in the hg15 gene of the protozoan parasite Entamoeba histolytica. Proc. Natl. Acad. Sci. USA 94:8812-8817.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 8812-8817
-
-
Singh, U.1
Rogers, J.B.2
Mann, B.J.3
Petri Jr., W.A.4
-
60
-
-
0035367012
-
Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum
-
Slupska, M. M., A. G. King, S. Fitz-Gibbon, J. Besemer, M. Borodovsky, and J. H. Miller. 2001. Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum. J. Mol. Biol. 309:347-360.
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 347-360
-
-
Slupska, M.M.1
King, A.G.2
Fitz-Gibbon, S.3
Besemer, J.4
Borodovsky, M.5
Miller, J.H.6
-
61
-
-
0043269205
-
The RNA polymerase II core promoter
-
Smale, S. T., and J. T. Kadonaga. 2003. The RNA polymerase II core promoter. Annu. Rev. Biochem. 72:449-479.
-
(2003)
Annu. Rev. Biochem.
, vol.72
, pp. 449-479
-
-
Smale, S.T.1
Kadonaga, J.T.2
-
62
-
-
0032982744
-
Normalized nucleotide frequencies allow the definition of archaeal promoter elements for different archaeal groups and reveal base-specific TFB contacts upstream of the TATA box
-
Soppa, J. 1999a. Normalized nucleotide frequencies allow the definition of archaeal promoter elements for different archaeal groups and reveal base-specific TFB contacts upstream of the TATA box. Mol. Microbiol. 31:1589-1592.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 1589-1592
-
-
Soppa, J.1
-
63
-
-
0033052407
-
Transcription initiation in Archaea: Facts, factors and future aspects
-
-. 1999b. Transcription initiation in Archaea: facts, factors and future aspects. Mol. Microbiol. 31:1295-1305.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 1295-1305
-
-
-
64
-
-
0012306020
-
A Drosophila full-length cDNA resource
-
research0080.1-0080.8
-
Stapleton, M. et al. 2002. A Drosophila full-length cDNA resource. Genome Biol. 3:research0080.1-0080.8.
-
(2002)
Genome Biol.
, vol.3
-
-
Stapleton, M.1
-
66
-
-
0037168586
-
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
-
Strausberg, R. L. et al. 2002. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc. Natl. Acad. Sci. USA 99:16899-16903.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 16899-16903
-
-
Strausberg, R.L.1
-
67
-
-
0024315267
-
Molecular mechanisms of transcriptional regulation in yeast
-
Struhl, K. 1989. Molecular mechanisms of transcriptional regulation in yeast. Annu. Rev. Biochem. 58:1051-1077.
-
(1989)
Annu. Rev. Biochem.
, vol.58
, pp. 1051-1077
-
-
Struhl, K.1
-
68
-
-
0343069798
-
Statistical analysis of the 5′ untranslated region of human mRNA using "Oligo-Capped" cDNA libraries
-
Suzuki, Y. et al. 2000. Statistical analysis of the 5′ untranslated region of human mRNA using "Oligo-Capped" cDNA libraries. Genomics 64:286-297.
-
(2000)
Genomics
, vol.64
, pp. 286-297
-
-
Suzuki, Y.1
-
69
-
-
0034991911
-
Diverse transcriptional initiation revealed by fine, large-scale mapping of mRNA start sites
-
Suzuki, Y. et al. 2001a. Diverse transcriptional initiation revealed by fine, large-scale mapping of mRNA start sites. EMBO Rep. 2:388-393.
-
(2001)
EMBO Rep.
, vol.2
, pp. 388-393
-
-
Suzuki, Y.1
-
70
-
-
0035021811
-
Identification and characterization of the potential promoter regions of 1031 kinds of human genes
-
-. 2001b. Identification and characterization of the potential promoter regions of 1031 kinds of human genes. Genome Res. 11:677-684.
-
(2001)
Genome Res.
, vol.11
, pp. 677-684
-
-
-
71
-
-
0029887361
-
Archaeal transcription factors and their role in transcription initiation
-
Thomm, M. 1996. Archaeal transcription factors and their role in transcription initiation. FEMS Microbiol. Rev. 18:159-171.
-
(1996)
FEMS Microbiol. Rev.
, vol.18
, pp. 159-171
-
-
Thomm, M.1
-
72
-
-
0034202785
-
Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus sol-fataricus
-
Tolstrup, N., C. W. Sensen, R. A. Garrett, and I. G. Clausen. 2000. Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus sol-fataricus. Extremophiles 4:175-179.
-
(2000)
Extremophiles
, vol.4
, pp. 175-179
-
-
Tolstrup, N.1
Sensen, C.W.2
Garrett, R.A.3
Clausen, I.G.4
-
73
-
-
0032514674
-
rRNA complementarity within mRNAs: A possible basis for mRNA-ribosome interactions and translational control
-
Tranque, P., M. C. Hu, G. M. Edelman, and V. P. Mauro. 1998. rRNA complementarity within mRNAs: a possible basis for mRNA-ribosome interactions and translational control. Proc. Natl. Acad. Sci. USA 95:12238-12243.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 12238-12243
-
-
Tranque, P.1
Hu, M.C.2
Edelman, G.M.3
Mauro, V.P.4
-
74
-
-
0024380509
-
Effect of deletions in the 5′-noncoding region on the translational efficiency of phosphoglycerate kinase mRNA in yeast
-
van den Heuvel, J. J., R. J. Bergkamp, R. J. Planta, and H. A. Raue. 1989. Effect of deletions in the 5′-noncoding region on the translational efficiency of phosphoglycerate kinase mRNA in yeast. Gene 79:83-95.
-
(1989)
Gene
, vol.79
, pp. 83-95
-
-
Van Den Heuvel, J.J.1
Bergkamp, R.J.2
Planta, R.J.3
Raue, H.A.4
-
75
-
-
0042065288
-
Regulation of fungal gene expression via short open reading frames in the mRNA 5′ untranslated region
-
Vilela, C., and J. E. McCarthy. 2003. Regulation of fungal gene expression via short open reading frames in the mRNA 5′ untranslated region. Mol. Microbiol. 49:859-867.
-
(2003)
Mol. Microbiol.
, vol.49
, pp. 859-867
-
-
Vilela, C.1
McCarthy, J.E.2
-
76
-
-
0037193658
-
Analysis of transcriptomes of human malaria parasite Plasmodium falciparum using full-length enriched library: Identification of novel genes and diverse transcription start sites of messenger RNAs
-
Watanabe, J., M. Sasaki, Y. Suzuki, and S. Sugano. 2002. Analysis of transcriptomes of human malaria parasite Plasmodium falciparum using full-length enriched library: identification of novel genes and diverse transcription start sites of messenger RNAs. Gene 291:105-113.
-
(2002)
Gene
, vol.291
, pp. 105-113
-
-
Watanabe, J.1
Sasaki, M.2
Suzuki, Y.3
Sugano, S.4
-
78
-
-
0026542759
-
Molecular cloning of the cDNA for the major hemoglobin component from Paramecium caudatum
-
Yamauchi, K., M. Mukai, T. Ochiai, and I. Usuki. 1992. Molecular cloning of the cDNA for the major hemoglobin component from Paramecium caudatum. Biochem. Biophys. Res. Commun. 182:195-200.
-
(1992)
Biochem. Biophys. Res. Commun.
, vol.182
, pp. 195-200
-
-
Yamauchi, K.1
Mukai, M.2
Ochiai, T.3
Usuki, I.4
-
79
-
-
0034646598
-
Transcriptional analysis of the glutamate dehydrogenase gene in the primitive eukaryote, Giardia lamblia. Identification of a primordial gene promoter
-
Yee, J., M. R. Mowatt, P. P. Dennis, and T. E. Nash. 2000. Transcriptional analysis of the glutamate dehydrogenase gene in the primitive eukaryote, Giardia lamblia. Identification of a primordial gene promoter. J. Biol. Chem. 275:11432-11439.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 11432-11439
-
-
Yee, J.1
Mowatt, M.R.2
Dennis, P.P.3
Nash, T.E.4
-
80
-
-
0030570838
-
The promoter structure of TGF-ß type II receptor revealed by "oligo-capping" method and deletion analysis
-
Yu, Y. S., Y. Suzuki, K. Yoshitomo, M. Muramatsu, N. Yamaguchi, and S. Sugano. 1996. The promoter structure of TGF-ß type II receptor revealed by "oligo-capping" method and deletion analysis. Biochem. Biophys. Res. Comm. 225: 302-306.
-
(1996)
Biochem. Biophys. Res. Comm.
, vol.225
, pp. 302-306
-
-
Yu, Y.S.1
Suzuki, Y.2
Yoshitomo, K.3
Muramatsu, M.4
Yamaguchi, N.5
Sugano, S.6
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