An oligonucleotide microarray to detect pathogens causing a sexually transmitted disease

Biochip Journal

Volumn 4, Issue 2, 2010, Pages 105-109

  Yoon, Hyun Kyu ^a   Kim, Jun Sub ^a   Chung, In Hyuk ^a,b   Lee, Seung Yong ^b   Han, Jae Ryul ^b   Park, Chansoo ^b   Hwang, Seung Yong ^a,b  

^a GenoCheck Co Ltd   (South Korea)

^b Hanyang University   (South Korea)

Author keywords

Candida albicans; DNA chip; Haemophilus ducreyi; Microarray; Mycoplasm genitalium; Mycroplasma hominis; Neisseria gonorrhoeae; STD; Trichomonas vaginalis

Indexed keywords

BACTERIOLOGY; DNA; OLIGONUCLEOTIDES; VIRUSES;

CANDIDA ALBICANS; DNA CHIP; HAEMOPHILUS DUCREYI; MYCOPLASM GENITALIUM; MYCROPLASMA HOMINIS; NEISSERIA GONORRHOEAE; STD; TRICHOMONAS VAGINALIS;

PATHOGENS;

BACTERIAL DNA; FUNGAL DNA; RNA 18S;

ARTICLE; BACTERIUM DETECTION; CANDIDA ALBICANS; CONTROLLED STUDY; DNA HYBRIDIZATION; DNA MICROARRAY; DNA SEQUENCE; FUNGAL DETECTION; GENE AMPLIFICATION; HAEMOPHILUS DUCREYI; HIGH THROUGHPUT SCREENING; MICROORGANISM DETECTION; MOLECULAR PROBE; MOLECULAR TYPING; MYCOPLASMA GENITALIUM; MYCOPLASMA HOMINIS; NEISSERIA GONORRHOEAE; NONHUMAN; PARASITE EXAMINATION; POLYMERASE CHAIN REACTION; SEXUALLY TRANSMITTED DISEASE; TRICHOMONAS VAGINALIS;

BACTERIA (MICROORGANISMS); CANDIDA ALBICANS; HAEMOPHILUS DUCREYI; NEISSERIA GONORRHOEAE; TRICHOMONAS VAGINALIS;

EID: 79959255057     PISSN: 19760280     EISSN: 20927843     Source Type: Journal    
DOI: 10.1007/s13206-010-4203-z     Document Type: Article

References (14)

1. Weinstock, H., Berman, S. & Cates, W., Jr. Sexually transmitted diseases among American youth: incidence and prevalence estimates, 2000. Perspect Sex Reprod. Health 36, 6-10 (2004).
2. Short, V.L. et al. Clinical presentation of Mycoplasma genitalium Infection versus Neisseria gonorrhoeae infection among women with pelvic inflammatory disease. Clin. Infect. Dis. 48, 41-47 (2009).
3. Klotman, M.E. et al. Neisseria gonorrhoeae-induced human defensins 5 and 6 increase HIV infectivity: role in enhanced transmission. J. Immunol. 180, 6176-6185 (2008).
4. Suntoke, T.R. et al. Evaluation of multiplex real-time PCR for detection of Haemophilus ducreyi, Treponema pallidum, herpes simplex virus type 1 and 2 in the diagnosis of genital ulcer disease in the Rakai District, Uganda. Sex. Transm. Infect. 85, 97-101 (2009).
5. Deguchi, T. et al. Longitudinal quantitative detection by real-time PCR of Mycoplasma genitalium in firstpass urine of men with recurrent nongonococcal urethritis. J. Clin. Microbiol. 40, 3854-3856 (2002).
6. Van Dyck, E., Ieven, M., Pattyn, S., Van Damme, L. & Laga, M. Detection of Chlamydia trachomatis and Neisseria gonorrhoeae by enzyme immunoassay, culture, and three nucleic acid amplification tests. J. Clin. Microbiol. 39, 1751-1756 (2001).
7. Shipitsyna, E. et al. Evaluation of six nucleic acid amplification tests used for diagnosis of Neisseria gonorrhoeae in Russia compared with an international strictly validated real-time porA pseudogene polymerase chain reaction. J. Eur. Acad. Dermatol. Venereol. 23, 1246-1253 (2009).
8. Hjelmevoll, S.O. et al. A fast real-time polymerase chain reaction method for sensitive and specific detection of the Neisseria gonorrhoeae porA pseudogene. J. Mol. Diagn. 8, 574-581 (2006).
9. Jurstrand, M., Jensen, J.S., Fredlund, H., Falk, L. & Molling, P. Detection of Mycoplasma genitalium in urogenital specimens by real-time PCR and by conventional PCR assay. J. Med. Microbiol. 54, 23-29 (2005).
10. Mayta, H. et al. 18S ribosomal DNA-based PCR for diagnosis of Trichomonas vaginalis. J. Clin. Microbiol. 38, 2683-2687 (2000).
11. Vats, V. et al. Detection of Chlamydia trachomatis by polymerase chain reaction in male patients with nongonococcal urethritis attending an STD clinic. Sex. Transm. Infect. 80, 327-328 (2004).
12. Maeda, S. et al. Detection of Mycoplasma genitalium, Mycoplasma hominis, Ureaplasma parvum (biovar 1) and Ureaplasma urealyticum (biovar 2) in patients with non-gonococcal urethritis using polymerase chain reaction-microtiter plate hybridization. Int. J. Urol. 11, 750-754 (2004).
13. Trama, J.P., Mordechai, E. & Adelson, M.E. Detection and identification of Candida species associated with Candida vaginitis by real-time PCR and pyrosequencing. Mol. Cell. Probes 19, 145-152 (2005).
14. Brown, H.L., Fuller, D.D., Jasper, L.T., Davis, T.E. & Wright, J.D. Clinical evaluation of affirm VPIII in the detection and identification of Trichomonas vaginalis, Gardnerella vaginalis, and Candida species in vaginitis/vaginosis. Infect. Dis. Obstet. Gynecol. 12, 17-21 (2004).