-
2
-
-
36349012436
-
Mapping barley genes to chromosome arms by transcript proWling of wheat-barley ditelosomic chromosome addition lines
-
Bilgic H, Cho S, Garvin DF, Muehlbauer GJ (2007) Mapping barley genes to chromosome arms by transcript proWling of wheat-barley ditelosomic chromosome addition lines. Genome 50:898-906
-
(2007)
Genome
, vol.50
, pp. 898-906
-
-
Bilgic, H.1
Cho, S.2
Garvin, D.F.3
Muehlbauer, G.J.4
-
3
-
-
0037047099
-
The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases
-
Brueggeman R, Rostoks N, Kudrna D, Kilian A, Han F, Chen J et al (2002) The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases. Proc Natl Acad Sci USA 99:9328-9333
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9328-9333
-
-
Brueggeman, R.1
Rostoks, N.2
Kudrna, D.3
Kilian, A.4
Han, F.5
Chen, J.6
-
4
-
-
5144232519
-
A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.)
-
Caldwell DG, McCallum N, Shaw P, Muehlbauer GJ, Marshall DF, Waugh R (2004) A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.). Plant J 40:143-150
-
(2004)
Plant J
, vol.40
, pp. 143-150
-
-
Caldwell, D.G.1
McCallum, N.2
Shaw, P.3
Muehlbauer, G.J.4
Marshall, D.F.5
Waugh, R.6
-
5
-
-
78149318399
-
DiVerential gene expression in nearly isogenic lines with QTL for partial resistance to Puccinia hordei in barley
-
Chen X, Niks RE, Hedley PE, Morris J, Druka A, Marcel TC, Vels A, Waugh R (2010a) DiVerential gene expression in nearly isogenic lines with QTL for partial resistance to Puccinia hordei in barley. BMC Genomics 11:629
-
(2010)
BMC Genomics
, vol.11
, pp. 629
-
-
Chen, X.1
Niks, R.E.2
Hedley, P.E.3
Morris, J.4
Druka, A.5
Marcel, T.C.6
Vels, A.7
Waugh, R.8
-
6
-
-
77649130219
-
An eQTL Analysis of Partial Resistance to Puccinia hordei in Barley
-
Chen X, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I, Morris J, Ramsay L, Marshall D, Milne L, Waugh R (2010b) An eQTL Analysis of Partial Resistance to Puccinia hordei in Barley. PLoS One 5(1):e8598
-
(2010)
PLoS One
, vol.5
, Issue.1
-
-
Chen, X.1
Hackett, C.A.2
Niks, R.E.3
Hedley, P.E.4
Booth, C.5
Druka, A.6
Marcel, T.C.7
Vels, A.8
Bayer, M.9
Milne, I.10
Morris, J.11
Ramsay, L.12
Marshall, D.13
Milne, L.14
Waugh, R.15
-
7
-
-
33644775672
-
Transcriptome analysis and physical mapping of barley genes in wheat-barley chromosome addition lines
-
Cho S, Garvin DF, Muehlbauer GJ (2006) Transcriptome analysis and physical mapping of barley genes in wheat-barley chromosome addition lines. Genetics 172:1277-1285
-
(2006)
Genetics
, vol.172
, pp. 1277-1285
-
-
Cho, S.1
Garvin, D.F.2
Muehlbauer, G.J.3
-
8
-
-
73449108400
-
-
BMC Genomics 10 Article No. 582
-
Close TJ, Bhat PR, Lonardi S, Wu Y, Rostoks N, Ramsay L, Druka A, Stein N, Svensson JT, Wanamaker S, Bozdag S, Roose ML, Moscou MJ, Chao S, Varshney RK, Szcs P, Sato K, Hayes PM, Matthews DE, Kleinhofs A, Muehlbauer GJ, DeYoung J, Marshall DF, Madishetty K, Fenton RD, Condamine P, Graner A, Waugh R, (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10: Article No. 582
-
(2009)
Development and Implementation of High-throughput SNP Genotyping in Barley
-
-
Close, T.J.1
Bhat, P.R.2
Lonardi, S.3
Wu, Y.4
Rostoks, N.5
Ramsay, L.6
Druka, A.7
Stein, N.8
Svensson, J.T.9
Wanamaker, S.10
Bozdag, S.11
Roose, M.L.12
Moscou, M.J.13
Chao, S.14
Varshney, R.K.15
Szcs, P.16
Sato, K.17
Hayes, P.M.18
Matthews, D.E.19
Kleinhofs, A.20
Muehlbauer, G.J.21
Deyoung, J.22
Marshall, D.F.23
Madishetty, K.24
Fenton, R.D.25
Condamine, P.26
Graner, A.27
Waugh, R.28
more..
-
9
-
-
14744267197
-
Updating the 'Crop Circle'
-
Devos KM., (2005) Updating the 'Crop Circle'. Curr Opin Plant Biol 8:155-162
-
(2005)
Curr Opin Plant Biol
, vol.8
, pp. 155-162
-
-
Devos, K.M.1
-
10
-
-
85047683772
-
Brachypodium distachyon: A new model system for functional genomics in grasses
-
Draper J, Mur LAJ, Jenkins G, Ghosh-Biswas GC, Bablak P, Hasterok R, Routledge APM (2001) Brachypodium distachyon: a new model system for functional genomics in grasses. Plant Physiol 127:1539-1555
-
(2001)
Plant Physiol
, vol.127
, pp. 1539-1555
-
-
Draper, J.1
Mur, L.A.J.2
Jenkins, G.3
Ghosh-Biswas, G.C.4
Bablak, P.5
Hasterok, R.6
Routledge, A.P.M.7
-
12
-
-
0016351896
-
Genome size and the proportion of repeated nucleotide sequence DNA in plants
-
Flavell RB., Bennett MD., Smith JB., Smith DB., (1974) Genome size and the proportion of repeated nucleotide sequence DNA in plants. Biochem Genet 12:257-269
-
(1974)
Biochem Genet
, vol.12
, pp. 257-269
-
-
Flavell, R.B.1
Bennett, M.D.2
Smith, J.B.3
Smith, D.B.4
-
13
-
-
32544454998
-
Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat
-
GriYths S, Sharp R, Foote TN, Bertin I, Wanous M, Reader S, Colas I, Moore G (2006) Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat. Nature 439:749-752
-
(2006)
Nature
, vol.439
, pp. 749-752
-
-
Griyths, S.1
Sharp, R.2
Foote, T.N.3
Bertin, I.4
Wanous, M.5
Reader, S.6
Colas, I.7
Moore, G.8
-
14
-
-
32444445432
-
A cDNA-AFLP based strategy to identify transcripts associated with avirulence in Phytophthora infestans
-
Guo J, Jiang RHY, Kamphuis LG, Govers F (2006) A cDNA-AFLP based strategy to identify transcripts associated with avirulence in Phytophthora infestans. Fungal Genet Biol 43:111-123
-
(2006)
Fungal Genet Biol
, vol.43
, pp. 111-123
-
-
Guo, J.1
Jiang, R.H.Y.2
Kamphuis, L.G.3
Govers, F.4
-
15
-
-
0141976706
-
EYcient construction of high-density linkage map and its application to QTL analysis in barley
-
Hori K, Kobayashi T, Shimizu A, Sato K, Takeda K, Kawasaki S (2003) EYcient construction of high-density linkage map and its application to QTL analysis in barley. Theor Appl Genet 107:806-813
-
(2003)
Theor Appl Genet
, vol.107
, pp. 806-813
-
-
Hori, K.1
Kobayashi, T.2
Shimizu, A.3
Sato, K.4
Takeda, K.5
Kawasaki, S.6
-
16
-
-
20144363330
-
Direct targeting and rapid isolation of BAC clones spanning a deWned chromosome region
-
Isidore E, Scherrer B, Bellec A, Budin K, Faivre-Rampant P, Waugh R, Keller B, Caboche M, Feuillet C, Chalhoub B (2005) Direct targeting and rapid isolation of BAC clones spanning a deWned chromosome region. Funct Integr Genomics 5:97-103
-
(2005)
Funct Integr Genomics
, vol.5
, pp. 97-103
-
-
Isidore, E.1
Scherrer, B.2
Bellec, A.3
Budin, K.4
Faivre-Rampant, P.5
Waugh, R.6
Keller, B.7
Caboche, M.8
Feuillet, C.9
Chalhoub, B.10
-
17
-
-
0035400051
-
Genetical genomics: The added value from segregation
-
Jansen RC, Nap JP, (2001) Genetical genomics: the added value from segregation. Trends Genet 17:388-391
-
(2001)
Trends Genet
, vol.17
, pp. 388-391
-
-
Jansen, R.C.1
Nap, J.P.2
-
18
-
-
33846818896
-
Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci
-
Keurentjes JJB, Fu J, Terpstra IR, Garcia JM, van den Ackerveken G, Basten SL, Peeters AJM, Vreugdenhil D, Koornneef M, Jansen RC (2007) Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci. Proc Natl Acad Sci USA 104:1708-1713
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 1708-1713
-
-
Keurentjes, J.J.B.1
Fu, J.2
Terpstra, I.R.3
Garcia, J.M.4
van den Ackerveken, G.5
Basten, S.L.6
Peeters, A.J.M.7
Vreugdenhil, D.8
Koornneef, M.9
Jansen, R.C.10
-
19
-
-
18844385197
-
Genetic architecture of transcript-level variation in diVerentiating xylem of a eucalyptus hybrid
-
Kirst M, Basten CJ, Myburg AA, Zeng ZB, SederoV RR, (2005) Genetic architecture of transcript-level variation in diVerentiating xylem of a eucalyptus hybrid. Genetics 169:2295-2303
-
(2005)
Genetics
, vol.169
, pp. 2295-2303
-
-
Kirst, M.1
Basten, C.J.2
Myburg, A.A.3
Zeng, Z.B.4
Rr, S.5
-
21
-
-
77951182730
-
From QTL to candidate gene: Genetical genomics of simple and complex traits in potato using a pooling strategy
-
Kloosterman B, Oortwijn M, Willigen J, America T, de Vos R, Visser RGF, Bachem CWB (2010) From QTL to candidate gene: genetical genomics of simple and complex traits in potato using a pooling strategy. BMC Genomics 11:158
-
(2010)
BMC Genomics
, vol.11
, pp. 158
-
-
Kloosterman, B.1
Oortwijn, M.2
Willigen, J.3
America, T.4
de Vos, R.5
Visser, R.G.F.6
Bachem, C.W.B.7
-
22
-
-
0036196695
-
The colinearity of the Sh2/A1 orthologous region in rice, sorghum and maize is interrupted and accompanied by genome expansion in the Triticeae
-
Li W, Gill BS (2002) The colinearity of the Sh2/A1 orthologous region in rice, sorghum and maize is interrupted and accompanied by genome expansion in the Triticeae. Genetics 160:1153-1162
-
(2002)
Genetics
, vol.160
, pp. 1153-1162
-
-
Li, W.1
Gill, B.S.2
-
23
-
-
33845976693
-
Mapping determinants of gene expression plasticity by genetical genomics in C-elegans
-
Li Y, Alvarez OA, Gutteling EW, Tijsterman M, Fu J, Riksen JAG, Hazendonk E, Prins P, Plasterk RHA, Jansen RC, Breitling R, Kammenga JE (2006) Mapping determinants of gene expression plasticity by genetical genomics in C-elegans. PLoS Genetics 2(12):e222
-
(2006)
PLoS Genetics
, vol.2
, Issue.12
-
-
Li, Y.1
Alvarez, O.A.2
Gutteling, E.W.3
Tijsterman, M.4
Fu, J.5
Riksen, J.A.G.6
Hazendonk, E.7
Prins, P.8
Plasterk, R.H.A.9
Jansen, R.C.10
Breitling, R.11
Kammenga, J.E.12
-
25
-
-
34250790333
-
SFP Genotyping from AVymetrix Arrays is robust but largely detects cis-acting expression regulators
-
Luo ZW, Potokina E, Druka A, Wise R, Waugh R, Kearsey MJ (2007) SFP Genotyping from AVymetrix Arrays is robust but largely detects cis-acting expression regulators. Genetics 176:789-800
-
(2007)
Genetics
, vol.176
, pp. 789-800
-
-
Luo, Z.W.1
Potokina, E.2
Druka, A.3
Wise, R.4
Waugh, R.5
Kearsey, M.J.6
-
26
-
-
33846834106
-
A high-density consensus map of barley to compare the distribution of QTLs for partial resistance to Puccinia hordei and of defence gene homologues
-
Marcel TC, Varshney RK, Barbieri M, Jafary H, de Kock MJD, Graner A, Niks RE (2007) A high-density consensus map of barley to compare the distribution of QTLs for partial resistance to Puccinia hordei and of defence gene homologues. Theor Appl Genet 114:487-500
-
(2007)
Theor Appl Genet
, vol.114
, pp. 487-500
-
-
Marcel, T.C.1
Varshney, R.K.2
Barbieri, M.3
Jafary, H.4
de Kock, M.J.D.5
Graner, A.6
Niks, R.E.7
-
27
-
-
0026052189
-
IdentiWcation of markers linked to disease resistance gene by bulked segregant analysis: A rapid method to detect markers in speciWc genomic regions using segregating populations
-
Michelmore RW, Paran I, Kesseli RV (1991) IdentiWcation of markers linked to disease resistance gene by bulked segregant analysis: a rapid method to detect markers in speciWc genomic regions using segregating populations. Proc Natl Acad Sci USA 88:9828-9832
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 9828-9832
-
-
Michelmore, R.W.1
Paran, I.2
Kesseli, R.V.3
-
28
-
-
37249073867
-
eQTL analysis of 16, 000 barley genes reveals a complex pattern of genome wide transcriptional regulation
-
Potokina E, Druka A, Luo Z, Wise R, Waugh R, Kearsey M, (2008a) eQTL analysis of 16, 000 barley genes reveals a complex pattern of genome wide transcriptional regulation. Plant J 53:90-101
-
(2008)
Plant J
, vol.53
, pp. 90-101
-
-
Potokina, E.1
Druka, A.2
Luo, Z.3
Wise, R.4
Waugh, R.5
Kearsey, M.6
-
29
-
-
53549102507
-
Tissue dependent limited pleiotropy aVects gene expression in barley
-
Potokina E, Druka A, Luo Z, Moscou M, Wise R, Waugh R, Kearsey M (2008b) Tissue dependent limited pleiotropy aVects gene expression in barley. Plant J 56:287-296
-
(2008)
Plant J
, vol.56
, pp. 287-296
-
-
Potokina, E.1
Druka, A.2
Luo, Z.3
Moscou, M.4
Wise, R.5
Waugh, R.6
Kearsey, M.7
-
30
-
-
28344445873
-
Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress
-
Rostoks N, Mudie S, Cardle L, Russell J, Ramsay L, Booth A, Svensson J, Wanamaker S, Walia H, Rodriguez E, Hedley P, Liu H, Morris J, Close T, Marshall D, Waugh R (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Mol Gen Genomics 274:515-527
-
(2005)
Mol Gen Genomics
, vol.274
, pp. 515-527
-
-
Rostoks, N.1
Mudie, S.2
Cardle, L.3
Russell, J.4
Ramsay, L.5
Booth, A.6
Svensson, J.7
Wanamaker, S.8
Walia, H.9
Rodriguez, E.10
Hedley, P.11
Liu, H.12
Morris, J.13
Close, T.14
Marshall, D.15
Waugh, R.16
-
31
-
-
0037456823
-
Genetics of gene expression surveyed in maize, mouse and man
-
Schadt EE, Monks SA, Drake TA, Lusis AJ, Che N, Colinayo V, RuV TG, Milligan SB, Lamb JR, Cavet G, Linsley PS, Mao M, Stoughton RB, Friend SH (2003) Genetics of gene expression surveyed in maize, mouse and man. Nature 422:297-302
-
(2003)
Nature
, vol.422
, pp. 297-302
-
-
Schadt, E.E.1
Monks, S.A.2
Drake, T.A.3
Lusis, A.J.4
Che, N.5
Colinayo, V.6
Tg, R.7
Milligan, S.B.8
Lamb, J.R.9
Cavet, G.10
Linsley, P.S.11
Mao, M.12
Stoughton, R.B.13
Friend, S.H.14
-
32
-
-
33846985266
-
IdentiWcation of candidate genes associated with cell wall digestibility and eQTL (expression quantitative trait loci) analysis in a Flint × Flint maize recombinant inbred line population
-
Shi C, Uzarowska A, Ouzunova M, Landbeck M, Wenzel G, Lübberstedt T (2007) IdentiWcation of candidate genes associated with cell wall digestibility and eQTL (expression quantitative trait loci) analysis in a Flint × Flint maize recombinant inbred line population. BMC Genomics 8:22
-
(2007)
BMC Genomics
, vol.8
, pp. 22
-
-
Shi, C.1
Uzarowska, A.2
Ouzunova, M.3
Landbeck, M.4
Wenzel, G.5
Lübberstedt, T.6
-
34
-
-
33847353451
-
A 1,000-loci transcript map of the barley genome: New anchoring points for integrative grass genomics
-
Stein N, Prasad M, Scholz U, Scholz U, Thiel T, Zhang H, Wolf M, Kota R, Varshney R, Perovic D, Grosse I, Graner A (2007) A 1,000-loci transcript map of the barley genome: new anchoring points for integrative grass genomics. Theor Appl Genet 114:823-39
-
(2007)
Theor Appl Genet
, vol.114
, pp. 823-839
-
-
Stein, N.1
Prasad, M.2
Scholz, U.3
Scholz, U.4
Thiel, T.5
Zhang, H.6
Wolf, M.7
Kota, R.8
Varshney, R.9
Perovic, D.10
Grosse, I.11
Graner, A.12
-
35
-
-
0034084963
-
The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted colinearity with maize chromosome 4
-
Tarchini R, Biddle P, Wineland R, Tingey S, Rafalski A (2000) The complete sequence of 340 kb of DNA around the rice Adh1-Adh2 region reveals interrupted colinearity with maize chromosome 4. Plant Cell 12:381-391
-
(2000)
Plant Cell
, vol.12
, pp. 381-391
-
-
Tarchini, R.1
Biddle, P.2
Wineland, R.3
Tingey, S.4
Rafalski, A.5
-
36
-
-
79958720212
-
-
In: Lörz H, Wenzel G (eds) Molecular marker systems. Springer, Berlin
-
Varshney RK, Prasad M, Graner A, (2004) Molecular marker maps of barley: a resource for intra- and interspeciWc genomics. In: Lörz H, Wenzel G (eds) Molecular marker systems. Springer, Berlin, pp 229-243
-
(2004)
Molecular Marker Maps of Barley: A Resource for Intra- and InterspeciWc Genomics
, pp. 229-243
-
-
Varshney, R.K.1
Prasad, M.2
Graner, A.3
-
37
-
-
33745500489
-
Genetic mapping and BAC assignment of EST-derived SSR markers shows nonuniform distribution of genes in the barley genome
-
Varshney RK, Grosse I, Haehnel U, Siefken R, Prasad M, Stein N, Langridge P, Altschmied L, Graner A, (2006) Genetic mapping and BAC assignment of EST-derived SSR markers shows nonuniform distribution of genes in the barley genome. Theor Appl Genet 113:239-250
-
(2006)
Theor Appl Genet
, vol.113
, pp. 239-250
-
-
Varshney, R.K.1
Grosse, I.2
Haehnel, U.3
Siefken, R.4
Prasad, M.5
Stein, N.6
Langridge, P.7
Altschmied, L.8
Graner, A.9
-
38
-
-
3042840970
-
Diversity Arrays Technology (DArT) for wholegenome proWling of barley
-
Wenzl P, Carling J, Kudrna D, Jaccoud D, Huttner E, Kleinhofs A, Kilian A, (2004) Diversity Arrays Technology (DArT) for wholegenome proWling of barley. Proc Natl Acad Sci USA 101:9915-9920
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 9915-9920
-
-
Wenzl, P.1
Carling, J.2
Kudrna, D.3
Jaccoud, D.4
Huttner, E.5
Kleinhofs, A.6
Kilian, A.7
-
39
-
-
34249055193
-
Global eQTL mapping reveals the complex genetic architecture of transcript level variation in Arabidopsis
-
West MAL, Kim K, Kliebenstein DJ, van Leeuwen H, Michelmore RW, Doerge RW, St Clair DA, (2007) Global eQTL mapping reveals the complex genetic architecture of transcript level variation in Arabidopsis. Genetics 175:1441-1450
-
(2007)
Genetics
, vol.175
, pp. 1441-1450
-
-
West, M.A.L.1
Kim, K.2
Kliebenstein, D.J.3
van Leeuwen, H.4
Michelmore, R.W.5
Doerge, R.W.6
St Clair, D.A.7
-
40
-
-
0033711956
-
A bacterial artiWcial chromosome library for barley (Hordeum vulgare L.) and the identiWcation of clones containing putative resistance genes
-
Yu Y, Tomkins J, Waugh R, Frisch D, Kudrna D, Kleinhofs A, Brueggeman R, Muehlbauer G, Wise R, Wing R, (2000) A bacterial artiWcial chromosome library for barley (Hordeum vulgare L.) and the identiWcation of clones containing putative resistance genes. Theor Appl Genet 101:1093-1099
-
(2000)
Theor Appl Genet
, vol.101
, pp. 1093-1099
-
-
Yu, Y.1
Tomkins, J.2
Waugh, R.3
Frisch, D.4
Kudrna, D.5
Kleinhofs, A.6
Brueggeman, R.7
Muehlbauer, G.8
Wise, R.9
Wing, R.10
-
41
-
-
70350142925
-
Global analysis of allele-speciWc expression in Arabidopsis thaliana
-
Zhang X, Borevitz JO, (2009) Global analysis of allele-speciWc expression in Arabidopsis thaliana. Genetics 182:943-954
-
(2009)
Genetics
, vol.182
, pp. 943-954
-
-
Zhang, X.1
Borevitz, J.O.2
|