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Volumn 4, Issue 2, 2011, Pages 156-161

Transcriptional profiling and genotyping of degraded nucleic acids from autopsy tissue samples after prolonged formalin fixation times

Author keywords

Autopsy; Critical illness; Formalin; Gene expression; Polymorphism; Pre amplification

Indexed keywords

ACE PROTEIN, HUMAN; DIPEPTIDYL CARBOXYPEPTIDASE; DNA; FIXATIVE; FORMALDEHYDE; RNA; TUMOR NECROSIS FACTOR ALPHA;

EID: 79958708491     PISSN: None     EISSN: 19362625     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (20)

References (20)
  • 1
    • 0034812285 scopus 로고    scopus 로고
    • Unlocking the archive-gene expression in paraffin-embedded tissue
    • Lewis F, Maughan NJ, Smith V, Hillan K, Quirke P: Unlocking the archive-gene expression in paraffin-embedded tissue. J Pathol 195:66-71, 2001.
    • (2001) J Pathol , vol.195 , pp. 66-71
    • Lewis, F.1    Maughan, N.J.2    Smith, V.3    Hillan, K.4    Quirke, P.5
  • 2
    • 24944555022 scopus 로고    scopus 로고
    • Genomicsbased prognosis and therapeutic prediction in breast cancer
    • Jeffrey SS, Lonning PE, Hillner BE: Genomicsbased prognosis and therapeutic prediction in breast cancer. J Natl Compr Canc Netw 3:291-300, 2005.
    • (2005) J Natl Compr Canc Netw , vol.3 , pp. 291-300
    • Jeffrey, S.S.1    Lonning, P.E.2    Hillner, B.E.3
  • 3
    • 0036898005 scopus 로고    scopus 로고
    • Effect of fixatives and tissue processing on the content and integrity of nucleic acids
    • Srinivasan M, Sedmak D, Jewell S: Effect of fixatives and tissue processing on the content and integrity of nucleic acids. Am J Pathol 161:1961-71, 2002.
    • (2002) Am J Pathol , vol.161 , pp. 1961-1971
    • Srinivasan, M.1    Sedmak, D.2    Jewell, S.3
  • 4
    • 33750214651 scopus 로고    scopus 로고
    • Genetic variation and the assessment of risk in septic patients
    • Suffredini AF, Chanock SJ: Genetic variation and the assessment of risk in septic patients. Intensive Care Med 32:1679-1680, 2006.
    • (2006) Intensive Care Med , vol.32 , pp. 1679-1680
    • Suffredini, A.F.1    Chanock, S.J.2
  • 5
    • 33750210386 scopus 로고    scopus 로고
    • A systematic review of the quality of genetic association studies in human sepsis
    • Clark MF, Baudouin SV: A systematic review of the quality of genetic association studies in human sepsis. Intensive Care Med 32:1679-80, 2006.
    • (2006) Intensive Care Med , vol.32 , pp. 1679-1680
    • Clark, M.F.1    Baudouin, S.V.2
  • 6
    • 55949135906 scopus 로고    scopus 로고
    • A quality assessment of genetic association studies supporting susceptibility and outcome in acute lung injury
    • Flores C, Pino-Yanes MM, Villar J: A quality assessment of genetic association studies supporting susceptibility and outcome in acute lung injury. Crit Care 12:R130, 2008.
    • (2008) Crit Care , vol.12
    • Flores, C.1    Pino-Yanes, M.M.2    Villar, J.3
  • 8
    • 0033571272 scopus 로고    scopus 로고
    • Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples
    • Masuda N, Ohnishi T, Kawamoto S, Monden M, Okubo K: Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples. Nucleic Acids Res 27:4436-43, 1999.
    • (1999) Nucleic Acids Res , vol.27 , pp. 4436-4443
    • Masuda, N.1    Ohnishi, T.2    Kawamoto, S.3    Monden, M.4    Okubo, K.5
  • 9
    • 0035710433 scopus 로고    scopus 로고
    • Real-time PCR analysis of DNA and RNA extracted from formalin-fixed and paraffin-embedded biopsies
    • Lehmann U, Kreipe H: Real-time PCR analysis of DNA and RNA extracted from formalin-fixed and paraffin-embedded biopsies. Methods 25:409-18, 2001.
    • (2001) Methods , vol.25 , pp. 409-418
    • Lehmann, U.1    Kreipe, H.2
  • 10
  • 11
    • 33645030115 scopus 로고    scopus 로고
    • Evaluation of low density array technology for quantitative parallel measurements of multiple genes in human tissue
    • Goulter AB, Harmer DW, Clark KL: Evaluation of low density array technology for quantitative parallel measurements of multiple genes in human tissue. BMC Genomics 7:34, 2006.
    • (2006) BMC Genomics , vol.7 , pp. 34
    • Goulter, A.B.1    Harmer, D.W.2    Clark, K.L.3
  • 13
    • 77951720098 scopus 로고    scopus 로고
    • Multiplex preamplification of specific cDNA targets prior to gene expression analysis by TaqMan arrays
    • Mengual L, Burset M, Marín-Aguilera M, Ribal MJ, Alcaraz A: Multiplex preamplification of specific cDNA targets prior to gene expression analysis by TaqMan arrays. BMC Research Notes 1:21, 2008.
    • (2008) BMC Research Notes , vol.1 , pp. 21
    • Mengual, L.1    Burset, M.2    Marín-Aguilera, M.3    Ribal, M.J.4    Alcaraz, A.5
  • 15
    • 0034189805 scopus 로고    scopus 로고
    • Quantitative mRNA expression analysis from formalin-fixed, paraffin-embedded tissues using 5' nuclease quantitative reverse transcription-polymerase chain reaction
    • Godfrey TE, Kim SH, Chavira M, Ruff DW, Warren RS, Gray JW, Jensen RH: Quantitative mRNA expression analysis from formalin-fixed, paraffin-embedded tissues using 5' nuclease quantitative reverse transcription-polymerase chain reaction. J Mol Diagn 2:84-91, 2000.
    • (2000) J Mol Diagn , vol.2 , pp. 84-91
    • Godfrey, T.E.1    Kim, S.H.2    Chavira, M.3    Ruff, D.W.4    Warren, R.S.5    Gray, J.W.6    Jensen, R.H.7
  • 18
    • 49749125216 scopus 로고    scopus 로고
    • Extraction of genomic DNA from paraffin-embedded tissue sections of human fetuses fixed and stored in formalin for long periods
    • Santos M, Saito C, Line S: Extraction of genomic DNA from paraffin-embedded tissue sections of human fetuses fixed and stored in formalin for long periods. Pathology-Research and Practice 204:633-36, 2008.
    • (2008) Pathology-Research and Practice , vol.204 , pp. 633-636
    • Santos, M.1    Saito, C.2    Line, S.3
  • 19
    • 67649961336 scopus 로고    scopus 로고
    • Reliability and reproducibility of a RNA preamplification method for low-density array analysis from formalin-fixed paraffin-embedded breast cancer samples
    • Ciotti P, Garuti A, Ballestrero A, Cirmena G, Chiaramondia M, Baccini P, Bellone E, Mandich P: Reliability and reproducibility of a RNA preamplification method for low-density array analysis from formalin-fixed paraffin-embedded breast cancer samples. Diagn Mol Pathol 18:112-8, 2009.
    • (2009) Diagn Mol Pathol , vol.18 , pp. 112-118
    • Ciotti, P.1    Garuti, A.2    Ballestrero, A.3    Cirmena, G.4    Chiaramondia, M.5    Baccini, P.6    Bellone, E.7    Mandich, P.8
  • 20
    • 33750310042 scopus 로고    scopus 로고
    • Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffinembedded, and unfixed frozen tissue samples
    • Scicchitano MS, Dalmas DA, Bertiaux MA, Anderson SM, Turner LR, Thomas RA, Mirable R, RW Boyce: Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffinembedded, and unfixed frozen tissue samples. J Histochem Cytochem 54:1229-37, 2006.
    • (2006) J Histochem Cytochem , vol.54 , pp. 1229-1237
    • Scicchitano, M.S.1    Dalmas, D.A.2    Bertiaux, M.A.3    Anderson, S.M.4    Turner, L.R.5    Thomas, R.A.6    Mirable, R.7    Boyce, R.W.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.