Differing utilization of glucose and algal particulate organic matter by deep-sea benthic organisms of Sagami Bay, Japan

Marine Ecology Progress Series

Volumn 431, Issue , 2011, Pages 11-24

  Nomaki, Hidetaka ^a   Ogawa, Nanako O ^a   Takano, Yoshinori ^a   Suga, Hisami ^a   Ohkouchi, Naohiko ^a   Kitazato, Hiroshi ^a  

^a JAPAN AGENCY FOR MARINE EARTH SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

Benthic ecosystem; Benthic foraminifera; Carbon budget; Dissolved organic matter; In situ tracer experiment; Particulate organic matter

Indexed keywords

BENTHIC ENVIRONMENT; BENTHIC FORAMINIFERA; BIOMASS; BODY SIZE; CARBON BUDGET; DEEP-SEA BENTHOS; DISSOLVED ORGANIC MATTER; GLUCOSE; GREEN ALGA; METAZOAN; PARTICULATE ORGANIC MATTER; POREWATER; SEAFLOOR; TRACER;

HONSHU; JAPAN; KANTO; SAGAMI BAY;

ALGAE; ARCHAEA; CHLORELLA (CHLORELLALES); CHLORELLA (PRASIOLALES); CHLORELLA (UNCLASSIFIED CHLOROPHYCEAE); CHLORELLA (UNCLASSIFIED TREBOUXIOPHYCEAE); CHLORELLA SP.; CHLOROPHYTA; FORAMINIFERA; METAZOA;

EID: 79958252371     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps09144     Document Type: Article

References (70)

1. 13C-labelled phytodetritus. Mar Ecol Prog Ser 251:37-47 (Pubitemid 36551374)
2. Andersson JH, Woulds C, Schwartz M, Cowie GL, Levin LA, Soetaert K, Middelburg JJ (2008) Short-term fate of phytodetritus in sediments across the Arabian Sea Oxygen Minimum Zone. Biogeosciences 5:43-53 (Pubitemid 351169947)
3. Baines SB, Fisher NS, Cole JJ (2005) Uptake of dissolved organic matter (DOM) and its importance to metabolic requirements of the zebra mussel, Dreissena polymorpha. Limnol Oceanogr 50:36-47 (Pubitemid 40199025)
4. Beaulieu SE, Smith KL (1998) Phytodetritus entering the benthic boundary layer and aggregated on the sea floor in the abyssal NE Pacific: macro- and microscopic composition. Deep-Sea Res II 45:781-815 (Pubitemid 28348521)
5. Bernhard JM, Bowser SS (1992) Bacterial biofilms as a trophic resource for certain benthic foraminifera. Mar Ecol Prog Ser 83:263-272 (Pubitemid 23401330)
6. Boucher Y, Kamekura M, Doolittle W (2004) Origins and evolution of isoprenoid lipid biosynthesis in archaea. Mol Microbiol 52:515-527 (Pubitemid 38520719)
7. Burdige DJ (2002) Sediment pore waters. In: Hansell DA, Carlson CA (eds) Biogeochemistry of marine dissolved organic matter. Academic Press, San Diego, CA, p 611-663
8. Cahet G, Daumas R, Sibuet M (1990) In situ experimentation at the water/sediment interface in the deep sea. 2. Biotransformation of dissolved organic substrates by microbial communities at 2000 m depth in the Bay of Biscay. Prog Oceanogr 24:169-178
9. Campos-Creasey LS, Tyler PA, Gage JD, John AWG (1994) Evidence for coupling the vertical flux of phytodetritus to the diet and seasonal life history of the deep-sea echinoid Echinus affinis. Deep-Sea Res I 41:369-388 (Pubitemid 2062388)
10. Carlson CA (2002) Production and removal processes. In: Hansell DA, Carlson CA (eds) Biogeochemistry of marine dissolved organic matter. Academic Press, San Diego, CA, p 91-151
11. 13C-enriched dissolved and particulate organic carbon in the bacteria containing coral reef sponge Halisarca caerulea: evidence for DOM feeding. Limnol Oceanogr 53:1376-1386 (Pubitemid 352000057)
12. DeLaca TE (1982) The use of dissolved amino acids by the foraminifer Notodendrodes antarctikos. Am Zool 22: 683-690
13. DeLaca TE, Karl DM, Lipps JH (1981) Direct use of dissolved organic carbon by agglutinated benthic foraminifera. Nature 289:287-289 (Pubitemid 12284057)
14. DeLong EF, King LL, Massana R, Cittone H, Murray A, Schleper C, Wakeham SG (1998) Dibiphytanyl ether lipids in nonthermophilic crenarchaeotes. Appl Environ Microbiol 64:1133-1138 (Pubitemid 28108498)
15. Drazen JC, Smith KL, Baldwin RJ (1998) Sediment community response to a temporally varying food supply at an abyssal station in the NE Pacific. Deep-Sea Res II 45: 893-913 (Pubitemid 28348525)
16. Fuhrman JA, Ferguson RL (1986) Nanomolar concentrations and rapid turnover of dissolved free amino acids in seawater: agreement between chemical and microbiological measurements. Mar Ecol Prog Ser 33:237-242
17. Gontikaki E, Mayor DJ, Narayanaswamy BE, Witte U (2011) Feeding strategies of deep-sea sub-Arctic macrofauna of the Faroe-Shetland Channel: combining natural stable isotopes and enrichment techniques. Deep-Sea Res I 58: 160-172
18. Gooday AJ (1988) A response by benthic foraminifera to the deposition of phytodetritus in the deep sea. Nature 332: 70-73 (Pubitemid 19317153)
19. Gooday AJ, Turley CM (1990) Response by benthic organisms to inputs of organic material to the ocean floor: a review. Philos Trans R Soc Lond A 331:119-138
20. Gooday AJ, Nomaki H, Kitazato H (2008) Modern deep-sea benthic foraminifera: a brief review of their morphologybased biodiversity and trophic diversity. In: Biogeochemical controls on palaeoceanographic proxies. Geological Society of London Special Publications 303:97-119
21. Graf G (1987) Benthic energy flow during a simulated autumn bloom sedimentation. Mar Ecol Prog Ser 39:23-29
22. Gudmundsson G, von Schmalensee M, Svavarsson J (2000) Are foraminifers (Protozoa) important food for small isopods (Crustacea) in the deep sea? Deep-Sea Res I 47: 2093.2109
23. Guilini K, van Oevelen D, Soetaret K, Middelburg JJ, Vanreusel A (2010) Nutritional importance of benthic bacteria for deep-sea nematodes from the Arctic ice margin: results of an isotope tracer experiment. Limnol Oceanogr 55: 1977.1989
24. Hemleben C, Kitazato H (1995) Deep-sea foraminifera under long time observation in the laboratory. Deep-Sea Res I 42: 827.832 (Pubitemid 26450872)
25. Hickman CS, Lipps JH (1983) Foraminiferivory: selective ingestion of foraminifera and test alterations produced by the neogastropod Olivella. J Foraminifer Res 13:108.114
26. Huguet C, Hopmans EC, Febo-Ayala W, Thompson DH, Sinninghe Damste JS, Schouten S (2006) An improved method to determine the absolute abundance of glycerol dibiphytanyl glycerol tetraether lipids. Org Geochem 37: 1036.1041 (Pubitemid 44292844)
27. Ingels J, Van den Driessche P, De Mesel I, Vanhove S, Moens T, Vanreusel A (2010) Preferred use of bacteria over phytoplankton by deep-sea nematodes in polar regions. Mar Ecol Prog Ser 406:121.133
28. Kanda J, Fujiwara S, Kitazato H, Okada Y (2003) Seasonal and annual variation in the primary production regime in the central part of Sagami Bay. Prog Oceanogr 57:17.30
29. Keil RG, Kirchman DL (1999) Utilization of dissolved protein and amino acids in the northern Sargasso Sea. Aquat Microb Ecol 18:293.300 (Pubitemid 29402934)
30. Kirchman DL (1990) Limitation of bacterial growth by dissolved organic matter in the subarctic Pacific. Mar Ecol Prog Ser 62:47.54
31. Kirchman DL, Meon B, Ducklow HW, Carlson CA, Hansell DA, Steward GF (2001) Glucose fluxes and concentrations of dissolved combined neutral sugars (polysaccharides) in the Ross Sea and Polar Front Zone, Antarctica. Deep-Sea Res II 48:4179.4197 (Pubitemid 34029736)
32. Kitazato H, Shirayama Y, Nakatsuka T, Fujiwara S and others (2000) Seasonal phytodetritus deposition and responses of bathyal benthic foraminiferal populations in Sagami Bay, Japan: preliminary results from 'Project Sagami 1996.1999'. Mar Micropaleontol 40:135.149
33. Kitazato H, Nakatsuka T, Shimanaga M, Kanda J and others (2003) Long-term monitoring of the sedimentary process in the central part of Sagami Bay, Japan: rationale, logistics and overview of results. Prog Oceanogr 57:3.16
34. Koga Y, Morii H (2007) Biosynthesis of ether-type polar lipids in archaea and evolutionary considerations. Microbiol Mol Biol Rev 71:97.120 (Pubitemid 46456685)
35. Koga Y, Nakano M (2008) A dendrogram of archaea based on lipid component parts composition and its relationship to rRNA phylogeny. Syst Appl Microbiol 31:169.182
36. 14C: comparison of fumigation and direct acidification by hydrochloric acid. Limnol Oceanogr Methods 6:254.262 (Pubitemid 351949837)
37. Langezaal AM, Jannink NT, Pierson ES, Van der Zwaan GJ (2005) Foraminiferal selectivity towards bacteria: an experimental approach using a cell-permeant stain. J Sea Res 54:256.275 (Pubitemid 41627857)
38. Lee JJ, McEnery M, Pierce S, Freudenthal HD, Muller WA (1966) Tracer experiments in feeding littoral foraminifera. J Protozool 13:659.670
39. Libes SM (2009) Introduction to marine biogeochemistry, 2nd edn. Academic Press, New York, NY
40. Lipp JS, Morono Y, Inagaki F, Hinrichs K (2008) Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature 454:991.994
41. Lochte K, Turley CM (1988) Bacteria and cyanobacteria associated with phytodetritus in the deep sea. Nature 333: 67.69
42. Loos E, Meindl D (1982) Composition of the cell wall of Chlorella fusca. Planta 156:270.273
43. 13C-labeling study. Limnol Oceanogr 45:1224.1234
44. Moodley L, Middelburg JJ, Boschker HTS, Duineveld GCA, Pel R, Herman PMJ, Heip CHR (2002) Bacteria and fora - minifera: key players in a short-term deep-sea benthic response to phytodetritus. Mar Ecol Prog Ser 236:23.29 (Pubitemid 34780677)
45. Moodley L, Middelburg JJ, Soetaert K, Boschker HTS, Herman PMJ, Heip CHR (2005) Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments. J Mar Res 63:457.469 (Pubitemid 40900022)
46. Nakatsuka T, Masuzawa T, Kanda J, Kitazato H, Shirayama Y, Shimanaga M, Yamaoka A (2003) Particle dynamics in the deep water column of Sagami Bay, Japan. I. Origins of apparent flux of sinking particles. Prog Oceanogr 57: 31.46
47. Nomaki H, Heinz P, Nakatsuka T, Shimanaga M, Kitazato H (2005) Species-specific ingestion of organic carbon by deep-sea benthic foraminifera and meiobenthos: in situ tracer experiments. Limnol Oceanogr 50:134.146 (Pubitemid 40199034)
48. 13C-labeled bacteria and algae by deep-sea benthic foraminifera. Mar Ecol Prog Ser 310:95.108
49. Nomaki H, Ogawa NO, Ohkouchi N, Suga H and others (2008) Benthic foraminifera as trophic links between phytodetritus and benthic metazoans: carbon and nitrogen isotopic evidence. Mar Ecol Prog Ser 357:153.164 (Pubitemid 351655949)
50. Nomaki H, Ohkouchi N, Heinz P, Suga H and others (2009) Degradation of algal lipids by benthic foraminifera: an in situ tracer experiment. Deep-Sea Res I 56:1488.1503
51. Ogawa NO, Nagata T, Kitazato H, Ohkouchi N (2010) Ultrasensitive elemental analyzer/isotope ratio mass spectrometer for stable nitrogen and carbon isotope analyses. In: Ohkouchi N, Tayasu I, Koba K (eds) Earth, life and isotopes. Kyoto University Press, Kyoto, p 339-353
52. Pascal PY, Dupuy C, Richard P, Niquil N (2008) Bacterivory in the common foraminifer Ammonia tepida: isotope tracer experiment and the controlling factors. J Exp Mar Biol Ecol 359:55-61
53. Pfannkuche O (1993) Benthic response to the sedimentation of particulate organic matter at the BIOTRANS station, 47° N, 20°W. Deep-Sea Res II 40:135-149 (Pubitemid 23379057)
54. Pfannkuche O, Boetius A, Lochte K, Lundgreen U, Thiel H (1999) Responses of deep-sea benthos to sedimentation patterns in the North-East Atlantic in 1992. Deep-Sea Res I 46:573-596 (Pubitemid 29147680)
55. Rich JH, Ducklow HW, Kirchman DL (1996) Concentrations and uptake of neutral monosaccharides along 140°W in the equatorial Pacific: contribution of glucose to heterotrophic bacterial activity and the DOM flux. Limnol Oceanogr 41:595-604 (Pubitemid 26324521)
56. Rich J, Gosselin M, Sherr E, Sherr B, Kirchman DL (1997) High bacterial production, uptake and concentrations of dissolved organic matter in the Central Arctic Ocean. Deep-Sea Res II 44:1645-1663 (Pubitemid 28159081)
57. Sawyer TE, King GM (1993) Glucose uptake and end product formation in an intertidal marine sediment. Appl Environ Microbiol 59:120-128 (Pubitemid 23028378)
58. Shimanaga M, Shirayama Y (2000) Response of benthic organisms to seasonal change of organic matter deposition in the bathyal Sagami Bay, central Japan. Oceanol Acta 23: 91-107 (Pubitemid 30199534)
59. Shimanaga M, Lee W, Nomaki H, Iijima K (2009) Sex ratio and gut contents of the deep-sea harpacticoid Neocervinia itoi and other cerviniids: a possibility of reduced foraging among males. J Crustac Biol 29:183-191
60. Shirayama Y (1992) Preliminary studies on the energy budget of a deep-sea nematode. Mer (Paris) 29:170-173
61. Sinninghe Damste JS, Schouten S, Hopmans EC, van Duin ACT, Geenevasen JAJ (2002) Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota. J Lipid Res 43:1641-1651 (Pubitemid 35168278)
62. Skoog A, Biddanda B, Benner R (1999) Bacterial utilization of dissolved glucose in the upper water column or the Gulf of Mexico. Limnol Oceanogr 44:1625-1633 (Pubitemid 29514868)
63. Sweetman AK, Witte U (2008) Response of an abyssal macrofaunal community to a phytodetrital pulse. Mar Ecol Prog Ser 355: 73-84 (Pubitemid 351449054)
64. 15N and microbial peptidoglycan studies. Anal Chem 81:394-399
65. Takano Y, Chikaraishi Y, Ogawa NO, Nomaki H and others (2010) Sedimentary membrane lipids recycled by deepsea benthic archaea. Nat Geosci 3:858-861
66. Tyler PA, Gage JD (1984) Seasonal reproduction of Echinus affinis (Echinodermata: Echinoidea) in the Rockall Trough, Northeast Atlantic Ocean. Deep-Sea Res 31: 387-402 (Pubitemid 14584589)
67. van Oevelen D, Middelburg JJ, Soetaert K, Moodley L (2006a) The fate of bacterial carbon in an intertidal sediment: modeling an in situ isotope tracer experiment. Limnol Oceanogr 51:1302-1314 (Pubitemid 43845286)
68. van Oevelen D, Moodley L, Soetaert K, Middelburg JJ (2006b) The trophic significance of bacterial carbon in a marine intertidal sediment: results of an in situ stable isotope labeling study. Limnol Oceanogr 51:2349-2359 (Pubitemid 44520927)
69. Witte U (1996) Seasonal reproduction in deep-sea sponges. triggered by vertical particle flux? Mar Biol 124:571-581
70. Woulds C, Cowie GL, Levin LA, Andersson JH and others (2007) Oxygen as a control on seafloor biological communities and their roles in sedimentary carbon cycling. Limnol Oceanogr 52:1698-1709 (Pubitemid 47121578)